RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 AU015836B2RUM3 263 aa19.31■□□□□ 0.68
Pcdha1-201ENSMUST00000070797 DekQ7TNV0 380 aaKnown RBP19.28■□□□□ 0.68
Pcdha1-201ENSMUST00000070797 Ofd1Q80Z25 1017 aa19.27■□□□□ 0.68
Pcdha1-201ENSMUST00000070797 Lmod3E9QA62 571 aa19.26■□□□□ 0.67
Pcdha1-201ENSMUST00000070797 Rad21Q61550 635 aaKnown RBP19.24■□□□□ 0.67
Pcdha1-201ENSMUST00000070797 Ifnlr1Q8CGK5 535 aa19.23■□□□□ 0.67
Pcdha1-201ENSMUST00000070797 Trim30dE9PWL0 497 aa19.22■□□□□ 0.67
Pcdha1-201ENSMUST00000070797 Gm13697A2AK42 830 aa19.2■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 Ipo9Q91YE6 1041 aa19.19■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 Supt16hQ920B9 1047 aa19.19■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 Tcerg1Q8CGF7 1100 aaKnown RBP19.19■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 Zbtb4Q5F293 982 aa19.17■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 Gtf3c3Q3TMP1 882 aa19.15■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 BlmO88700 1416 aa19.15■□□□□ 0.66
Pcdha1-201ENSMUST00000070797 P3h3Q8CG70 732 aa19.13■□□□□ 0.65
Pcdha1-201ENSMUST00000070797 Zbtb7cQ8VCZ7 619 aa19.12■□□□□ 0.65
Pcdha1-201ENSMUST00000070797 PtmaP26350 111 aa19.12■□□□□ 0.65
Pcdha1-201ENSMUST00000070797 Mbd3Q9Z2D8 285 aaKnown RBP19.11■□□□□ 0.65
Pcdha1-201ENSMUST00000070797 Tnnt2P50752 301 aa19.11■□□□□ 0.65
Pcdha1-201ENSMUST00000070797 Ubl4bQ9CQ84 188 aa19.08■□□□□ 0.65
Pcdha1-201ENSMUST00000070797 Baz1aO88379 1555 aa19.08■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Golga3P55937 1487 aa19.07■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Plcb2A3KGF7 1181 aa19.07■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Setd5Q5XJV7 1441 aa19.04■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Cwc22Q8C5N3 908 aaKnown RBP19.03■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Vsig10D3YX43 558 aa19.03■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Adam1bQ8R534 806 aa19.02■□□□□ 0.64
Pcdha1-201ENSMUST00000070797 Dnttip2Q8R2M2 758 aaKnown RBP19.01■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 Pknox2Q8BG99 474 aa19.01■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 Dnai1Q8C0M8 701 aa18.97■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 Erich6D3Z6S9 713 aa18.97■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 Chic2Q9D9G3 165 aa18.97■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 4933402E13RikQ9D4D2 429 aa18.97■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 Fkbp15Q6P9Q6 1216 aaKnown RBP18.96■□□□□ 0.63
Pcdha1-201ENSMUST00000070797 Eea1Q8BL66 1411 aa18.95■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Rrp12Q6P5B0 1295 aaKnown RBP18.95■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 NacadQ5SWP3 1504 aa18.94■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 PrkcshO08795 521 aa18.93■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Mia2Q91ZV0 1396 aa18.93■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Prdm10Q3UTQ7 1184 aa18.92■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Clstn2Q9ER65 966 aa18.92■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Rsf1E9PWW9 1441 aaKnown RBP18.91■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Map7O88735 730 aa18.9■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Nolc1E9Q5C9 702 aaKnown RBP18.9■□□□□ 0.62
Pcdha1-201ENSMUST00000070797 Slc4a3P16283 1227 aa18.86■□□□□ 0.61
Pcdha1-201ENSMUST00000070797 Atp1b4Q99ME6 356 aa18.86■□□□□ 0.61
Pcdha1-201ENSMUST00000070797 EspnQ9ET47 871 aa18.84■□□□□ 0.61
Pcdha1-201ENSMUST00000070797 Plppr3Q7TPB0 716 aa18.83■□□□□ 0.61
Pcdha1-201ENSMUST00000070797 B4galnt3Q6L8S8 986 aa18.83■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Gm13695A2AK44 830 aa18.82■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Spryd3E9Q9B3 442 aa18.82■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Dbr1Q923B1 550 aa18.82■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Ddrgk1Q80WW9 315 aa18.81■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 MsnP26041 577 aaKnown RBP18.79■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Fgd1P52734 960 aa18.79■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Rgl3Q3UYI5 709 aa18.79■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Card11Q8CIS0 1159 aa18.79■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Rwdd1Q9CQK7 243 aa18.79■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Chmp4bQ9D8B3 224 aaKnown RBP18.78■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 Arid4bA2CG63 1314 aaKnown RBP18.77■□□□□ 0.6
Pcdha1-201ENSMUST00000070797 PtmsQ9D0J8 101 aaKnown RBP18.77■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Chmp5Q9D7S9 219 aa18.77■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Erich6bQ9D4S6 220 aa18.76■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Rangap1P46061 589 aaKnown RBP18.75■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Casc1Q6TDU8 730 aa18.75■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Apbb1Q9QXJ1 710 aa18.73■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Wwc2Q6NXJ0 1187 aa18.73■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Ipo8Q7TMY7 1010 aa18.73■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 KnstrnQ9D9Z1 312 aaKnown RBP18.72■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Taok2Q6ZQ29 1240 aa18.71■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Mapk8ip3Q9ESN9 1337 aa18.71■□□□□ 0.59
Pcdha1-201ENSMUST00000070797 Trim26Q99PN3 545 aa18.7■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Mre11Q61216 706 aa18.68■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Pdcl3Q8BVF2 240 aa18.68■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Kdm5dQ62240 1548 aa18.68■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Hspa5P20029 655 aaKnown RBP18.67■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Exoc6Q8R313 802 aa18.67■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Fhad1A6PWD2 1420 aa18.64■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 VgfQ0VGU4 617 aa18.64■□□□□ 0.58
Pcdha1-201ENSMUST00000070797 Calcoco2A2A6M5 331 aa18.61■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Neurod2Q62414 383 aa18.61■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 CntlnA2AM05 1397 aa18.61■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Baz1bQ9Z277 1479 aa18.61■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Mak16Q8BGS0 296 aaKnown RBP18.6■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Smg6P61406 1418 aaKnown RBP18.6■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Becn1O88597 448 aa18.59■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 ChgaP26339 463 aaKnown RBP18.59■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Cep162Q6ZQ06 1403 aa18.59■□□□□ 0.57
Pcdha1-201ENSMUST00000070797 Map7d2A2AG50 781 aa18.57■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Plcd4Q8K3R3 807 aa18.57■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Safb2Q80YR5 991 aaKnown RBP18.57■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Zscan21Q07231 555 aa18.57■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Znf316Q6PGE4 1016 aa18.56■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Gm973E9Q295 1059 aa18.56■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Grwd1Q810D6 446 aaKnown RBP18.56■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Ercc6F8VPZ5 1481 aa18.55■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 NudcO35685 332 aaKnown RBP18.55■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Ush1cQ9ES64 910 aa18.54■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Armcx1Q9CX83 456 aa18.53■□□□□ 0.56
Pcdha1-201ENSMUST00000070797 Ccdc18Q640L5 1455 aa18.53■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms