RNA–Protein interactions for RNA: ENSMUST00000055949.3

Pcdhb18-201, Transcript of Protocadherin beta-18, mousemouse

APPRIS P1 BASIC

Gene Pcdhb18, Length 5,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18-201ENSMUST00000055949 Rb1cc1Q9ESK9 1588 aa17.05■□□□□ 0.32
Pcdhb18-201ENSMUST00000055949 Kif15Q6P9L6 1387 aa17.03■□□□□ 0.32
Pcdhb18-201ENSMUST00000055949 Setd5Q5XJV7 1441 aa17.03■□□□□ 0.32
Pcdhb18-201ENSMUST00000055949 Ccdc18Q640L5 1455 aa17.02■□□□□ 0.32
Pcdhb18-201ENSMUST00000055949 NacadQ5SWP3 1504 aa17■□□□□ 0.31
Pcdhb18-201ENSMUST00000055949 Znf326O88291 580 aa16.98■□□□□ 0.31
Pcdhb18-201ENSMUST00000055949 Srpk2O54781 681 aaKnown RBP16.96■□□□□ 0.31
Pcdhb18-201ENSMUST00000055949 Arhgap27A2AB59 869 aa16.92■□□□□ 0.3
Pcdhb18-201ENSMUST00000055949 Mrs2Q5NCE8 434 aa16.91■□□□□ 0.3
Pcdhb18-201ENSMUST00000055949 Calr4Q3TQS0 420 aa16.9■□□□□ 0.3
Pcdhb18-201ENSMUST00000055949 Rad21Q61550 635 aaKnown RBP16.9■□□□□ 0.3
Pcdhb18-201ENSMUST00000055949 Exosc9Q9JHI7 438 aaKnown RBP16.9■□□□□ 0.3
Pcdhb18-201ENSMUST00000055949 Mroh3A0A1D5RM54 893 aa16.89■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Iqcf3Q9D498 203 aa16.89■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Rangap1P46061 589 aaKnown RBP16.89■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 MyclP10166 368 aa16.89■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Chmp4bQ9D8B3 224 aaKnown RBP16.88■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Rgl3Q3UYI5 709 aa16.86■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 ArxO35085 564 aa16.85■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Gm20521D3Z5F7 333 aa16.85■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Ppp4r2Q0VGB7 417 aa16.84■□□□□ 0.29
Pcdhb18-201ENSMUST00000055949 Eif4g2Q62448 906 aaKnown RBP16.83■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Cwc22Q8C5N3 908 aaKnown RBP16.83■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Mapk8ip3Q9ESN9 1337 aa16.81■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Kdm2aP59997 1161 aa16.8■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Mtus2Q3UHD3 1353 aa16.8■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Eea1Q8BL66 1411 aa16.8■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Rrp7aQ9D1C9 280 aaKnown RBP16.78■□□□□ 0.28
Pcdhb18-201ENSMUST00000055949 Wdr43Q6ZQL4 677 aaKnown RBP16.76■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 Golga3P55937 1487 aa16.76■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 NudcO35685 332 aaKnown RBP16.75■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 Ppp1r18Q8BQ30 594 aa16.75■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 Rsph4aQ8BYM7 716 aa16.74■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 CatipB9EKE5 520 aa16.74■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 HdgfP51859 237 aaKnown RBP16.71■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 Card11Q8CIS0 1159 aa16.71■□□□□ 0.27
Pcdhb18-201ENSMUST00000055949 Stag3O70576 1240 aa16.7■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Irx6Q9ER75 438 aa16.7■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Trim26Q99PN3 545 aa16.68■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 1700123L14RikQ3V2K7 440 aa16.68■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Gm6268A2A3U9 297 aa16.67■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Pds5bQ4VA53 1446 aaKnown RBP16.67■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Mia2Q91ZV0 1396 aa16.66■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Ccdc9Q8VC31 543 aaKnown RBP16.65■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Stk24Q99KH8 431 aa16.65■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 Grwd1Q810D6 446 aaKnown RBP16.64■□□□□ 0.26
Pcdhb18-201ENSMUST00000055949 DekQ7TNV0 380 aaKnown RBP16.64■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 NgefQ8CHT1 710 aa16.63■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 PnnO35691 725 aaKnown RBP16.62■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 Ggt6Q6PDE7 497 aa16.61■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 Baz1aO88379 1555 aa16.61■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 Lemd3Q9WU40 921 aa16.59■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 Pes1Q9EQ61 584 aaKnown RBP16.58■□□□□ 0.25
Pcdhb18-201ENSMUST00000055949 Ofd1Q80Z25 1017 aa16.58■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Hsp90ab1P11499 724 aaKnown RBP16.58■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Trim30dE9PWL0 497 aa16.57■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Map7O88735 730 aa16.57■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Pde3bQ61409 1100 aa16.57■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Aebp2Q9Z248 504 aaKnown RBP16.55■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Rtn4Q99P72 1162 aaKnown RBP16.54■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Trim44Q9QXA7 346 aa16.54■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Arid4bA2CG63 1314 aaKnown RBP16.54■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Fam71e1A1L3C1 212 aa16.53■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Dnai2A2AC93 623 aa16.53■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 Kif27Q7M6Z4 1394 aa16.52■□□□□ 0.24
Pcdhb18-201ENSMUST00000055949 HnrnpuQ8VEK3 800 aaKnown RBP16.51■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 Rtf1A2AQ19 715 aaKnown RBP16.51■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 Map4P27546 1125 aaKnown RBP16.49■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 Htatsf1Q8BGC0 757 aa16.48■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 Ythdc1E9Q5K9 736 aaKnown RBP16.47■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 AknaQ80VW7 1404 aa16.47■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 CanxP35564 591 aaKnown RBP16.47■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 Arid3cA6PWV5 409 aa16.46■□□□□ 0.23
Pcdhb18-201ENSMUST00000055949 Sart3Q9JLI8 962 aaKnown RBP16.45■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Dhx57Q6P5D3 1388 aaKnown RBP16.45■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Fhad1A6PWD2 1420 aa16.45■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 MccE9PWI3 1003 aa16.44■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Mbd3Q9Z2D8 285 aaKnown RBP16.44■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Nol10Q5RJG1 687 aaKnown RBP16.44■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Psme1P97371 249 aa16.43■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Gtf2e1Q9D0D5 440 aa16.43■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 KnstrnQ9D9Z1 312 aaKnown RBP16.43■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 1700019A02RikA0A087WPV9 146 aa16.42■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Neurod2Q62414 383 aa16.42■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 PtmaP26350 111 aa16.42■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Ppm1gQ61074 542 aa16.42■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 MlecQ6ZQI3 291 aaKnown RBP16.41■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Hsp90b1P08113 802 aaKnown RBP16.41■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Vsig10D3YX43 558 aa16.4■□□□□ 0.22
Pcdhb18-201ENSMUST00000055949 Txndc2Q6P902 515 aa16.38■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Casc1Q6TDU8 730 aa16.38■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Wwc2Q6NXJ0 1187 aa16.37■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Stard8Q8K031 1019 aa16.37■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Sh3bp5Q9Z131 463 aa16.37■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 PtmsQ9D0J8 101 aaKnown RBP16.36■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Ccdc27Q3V036 639 aa16.35■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Clstn1Q9EPL2 979 aa16.35■□□□□ 0.21
Pcdhb18-201ENSMUST00000055949 Adam1bQ8R534 806 aa16.33■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Cnga1P29974 684 aa16.32■□□□□ 0.2
Pcdhb18-201ENSMUST00000055949 Spag9Q58A65 1321 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms