RNA–Protein interactions for RNA: ENSMUST00000051408.7

Clrn1-201, Transcript of Clarin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-201ENSMUST00000051408 Ehmt2Q9Z148 1263 aaKnown RBP18.77■□□□□ 0.6
Clrn1-201ENSMUST00000051408 Skida1Q80YR3 822 aa18.75■□□□□ 0.59
Clrn1-201ENSMUST00000051408 Shroom2A2ALU4 1481 aa18.71■□□□□ 0.59
Clrn1-201ENSMUST00000051408 Kif21aQ9QXL2 1672 aa18.69■□□□□ 0.58
Clrn1-201ENSMUST00000051408 Kif15Q6P9L6 1387 aa18.68■□□□□ 0.58
Clrn1-201ENSMUST00000051408 Brd4Q9ESU6 1400 aaKnown RBP18.66■□□□□ 0.58
Clrn1-201ENSMUST00000051408 Tcf3P15806 651 aa18.64■□□□□ 0.57
Clrn1-201ENSMUST00000051408 Col17a1Q07563 1470 aa18.61■□□□□ 0.57
Clrn1-201ENSMUST00000051408 Esf1Q3V1V3 845 aaKnown RBP18.61■□□□□ 0.57
Clrn1-201ENSMUST00000051408 Eif4g3Q80XI3 1579 aaKnown RBP18.6■□□□□ 0.57
Clrn1-201ENSMUST00000051408 Npm1Q61937 292 aaKnown RBP18.57■□□□□ 0.56
Clrn1-201ENSMUST00000051408 Ccdc136Q3TVA9 1136 aa18.56■□□□□ 0.56
Clrn1-201ENSMUST00000051408 Pabpn1Q8CCS6 302 aaKnown RBP18.51■□□□□ 0.55
Clrn1-201ENSMUST00000051408 Kcnn1Q9EQR3 537 aa18.51■□□□□ 0.55
Clrn1-201ENSMUST00000051408 Ppp1r37Q8BKR5 712 aa18.48■□□□□ 0.55
Clrn1-201ENSMUST00000051408 Urb2E9Q7L1 1524 aaKnown RBP18.44■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Prr29B1ARI9 187 aa18.42■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Znf703P0CL69 594 aa18.42■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Lamc3Q9R0B6 1581 aa18.42■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Pitpnm1O35954 1243 aa18.41■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Cep164Q5DU05 1446 aa18.4■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Ecm2Q5FW85 670 aa18.4■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Top2bQ64511 1612 aa18.4■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Plb1Q3TTY0 1478 aa18.39■□□□□ 0.54
Clrn1-201ENSMUST00000051408 Pelp1Q9DBD5 1123 aaKnown RBP18.39■□□□□ 0.53
Clrn1-201ENSMUST00000051408 Rtl1Q7M732 1744 aa18.35■□□□□ 0.53
Clrn1-201ENSMUST00000051408 Dhx29Q6PGC1 1365 aaKnown RBP18.35■□□□□ 0.53
Clrn1-201ENSMUST00000051408 Ildr2B5TVM2 661 aa18.34■□□□□ 0.53
Clrn1-201ENSMUST00000051408 Il27Q8K3I6 234 aa18.32■□□□□ 0.52
Clrn1-201ENSMUST00000051408 Lrrc43Q3V0L5 667 aa18.28■□□□□ 0.52
Clrn1-201ENSMUST00000051408 Trim35Q8C006 501 aa18.28■□□□□ 0.52
Clrn1-201ENSMUST00000051408 Pcdh10E9PXQ7 1057 aa18.21■□□□□ 0.51
Clrn1-201ENSMUST00000051408 LrpprcQ6PB66 1392 aaKnown RBP18.2■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Jarid2Q62315 1234 aa18.19■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Zcchc11B2RX14 1644 aaKnown RBP18.19■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Kank3Q9Z1P7 791 aa18.18■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Crocc2F6XLV1 1638 aa18.18■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Rusc2Q80U22 1514 aa18.18■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Ccdc18Q640L5 1455 aa18.17■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Cacnb1Q8R3Z5 597 aa18.15■□□□□ 0.5
Clrn1-201ENSMUST00000051408 Ift140E9PY46 1464 aa18.14■□□□□ 0.49
Clrn1-201ENSMUST00000051408 Pip4p2Q9CZX7 257 aa18.13■□□□□ 0.49
Clrn1-201ENSMUST00000051408 Clcn6O35454 870 aa18.1■□□□□ 0.49
Clrn1-201ENSMUST00000051408 Cadps2Q8BYR5 1297 aa18.08■□□□□ 0.48
Clrn1-201ENSMUST00000051408 Camsap1A2AHC3 1581 aa18.04■□□□□ 0.48
Clrn1-201ENSMUST00000051408 PogzQ8BZH4 1409 aaKnown RBP18.04■□□□□ 0.48
Clrn1-201ENSMUST00000051408 TnnQ80Z71 1560 aa18.04■□□□□ 0.48
Clrn1-201ENSMUST00000051408 Ttbk1Q6PCN3 1308 aa18.03■□□□□ 0.48
Clrn1-201ENSMUST00000051408 Arhgef5E9Q7D5 1581 aa18■□□□□ 0.47
Clrn1-201ENSMUST00000051408 Adgrl3Q80TS3 1537 aa18■□□□□ 0.47
Clrn1-201ENSMUST00000051408 Nyap1Q6PFX7 833 aa17.98■□□□□ 0.47
Clrn1-201ENSMUST00000051408 Disp1Q3TDN0 1521 aa17.98■□□□□ 0.47
Clrn1-201ENSMUST00000051408 Prdm10Q3UTQ7 1184 aa17.97■□□□□ 0.47
Clrn1-201ENSMUST00000051408 Duox2A2AQ99 1517 aa17.95■□□□□ 0.46
Clrn1-201ENSMUST00000051408 Gm156Q58A37 223 aa17.92■□□□□ 0.46
Clrn1-201ENSMUST00000051408 PtprkP35822 1457 aa17.92■□□□□ 0.46
Clrn1-201ENSMUST00000051408 Cngb1E1AZ71 1325 aa17.9■□□□□ 0.46
Clrn1-201ENSMUST00000051408 Golga3P55937 1487 aa17.88■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Nup160Q9Z0W3 1402 aaKnown RBP17.88■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Cc2d2bA0A286YDU8 1405 aa17.87■□□□□ 0.45
Clrn1-201ENSMUST00000051408 PtprtQ99M80 1454 aa17.87■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Cep170Q6A065 1588 aa17.86■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Hnrnpul2Q00PI9 745 aaKnown RBP17.85■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Gapvd1Q6PAR5 1458 aa17.85■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Setd1bQ8CFT2 1985 aa17.84■□□□□ 0.45
Clrn1-201ENSMUST00000051408 Fgd6Q69ZL1 1399 aa17.8■□□□□ 0.44
Clrn1-201ENSMUST00000051408 MycnP03966 462 aaKnown RBP17.8■□□□□ 0.44
Clrn1-201ENSMUST00000051408 Sra1Q80VJ2 232 aa17.79■□□□□ 0.44
Clrn1-201ENSMUST00000051408 Samd9lQ69Z37 1561 aa17.79■□□□□ 0.44
Clrn1-201ENSMUST00000051408 Grin2bQ01097 1482 aa17.76■□□□□ 0.43
Clrn1-201ENSMUST00000051408 Pbrm1Q8BSQ9 1634 aaKnown RBP17.75■□□□□ 0.43
Clrn1-201ENSMUST00000051408 Rad54l2Q99NG0 1466 aa17.75■□□□□ 0.43
Clrn1-201ENSMUST00000051408 Fmn1Q05860 1466 aa17.71■□□□□ 0.43
Clrn1-201ENSMUST00000051408 AqrQ8CFQ3 1481 aaKnown RBP17.71■□□□□ 0.43
Clrn1-201ENSMUST00000051408 AknaQ80VW7 1404 aa17.71■□□□□ 0.43
Clrn1-201ENSMUST00000051408 SnphQ80U23 495 aa17.68■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Pprc1Q6NZN1 1644 aa17.68■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Grin2aP35436 1464 aa17.68■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Efcab5A0JP43 1406 aa17.67■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Ythdc2B2RR83 1445 aaKnown RBP17.67■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Magi3Q9EQJ9 1476 aa17.66■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Abcc1O35379 1528 aa17.66■□□□□ 0.42
Clrn1-201ENSMUST00000051408 Hdac5Q9Z2V6 1113 aa17.64■□□□□ 0.41
Clrn1-201ENSMUST00000051408 Rapgef2Q8CHG7 1496 aa17.63■□□□□ 0.41
Clrn1-201ENSMUST00000051408 Spock2Q9ER58 423 aa17.61■□□□□ 0.41
Clrn1-201ENSMUST00000051408 Dok7Q18PE0 504 aa17.57■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Ppp1r18Q8BQ30 594 aa17.57■□□□□ 0.4
Clrn1-201ENSMUST00000051408 CadpsQ80TJ1 1355 aa17.56■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Pde4dQ01063 747 aa17.55■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Plekhg3Q4VAC9 1341 aa17.53■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Fam117bQ3U3E2 584 aa17.52■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Repin1Q5U4E2 545 aa17.52■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Soga1E1U8D0 1418 aa17.52■□□□□ 0.4
Clrn1-201ENSMUST00000051408 Ppp6r1Q7TSI3 856 aa17.51■□□□□ 0.39
Clrn1-201ENSMUST00000051408 Setbp1Q9Z180 1582 aa17.51■□□□□ 0.39
Clrn1-201ENSMUST00000051408 Top2aQ01320 1528 aaKnown RBP17.51■□□□□ 0.39
Clrn1-201ENSMUST00000051408 Chd1P40201 1711 aa17.5■□□□□ 0.39
Clrn1-201ENSMUST00000051408 Pla2r1Q62028 1487 aa17.5■□□□□ 0.39
Clrn1-201ENSMUST00000051408 Arhgap27A2AB59 869 aa17.45■□□□□ 0.38
Clrn1-201ENSMUST00000051408 Neo1P97798 1493 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 108.3 ms