RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Nolc1E9Q5C9 702 aaKnown RBP20.82■□□□□ 0.92
Ushbp1-201ENSMUST00000049184 TnnQ80Z71 1560 aa20.8■□□□□ 0.92
Ushbp1-201ENSMUST00000049184 Iqgap2Q3UQ44 1575 aa20.79■□□□□ 0.92
Ushbp1-201ENSMUST00000049184 Tiam1Q60610 1591 aa20.79■□□□□ 0.92
Ushbp1-201ENSMUST00000049184 UacaQ8CGB3 1411 aa20.77■□□□□ 0.92
Ushbp1-201ENSMUST00000049184 Gm13697A2AK42 830 aa20.76■□□□□ 0.91
Ushbp1-201ENSMUST00000049184 BlmO88700 1416 aa20.72■□□□□ 0.91
Ushbp1-201ENSMUST00000049184 Pelp1Q9DBD5 1123 aaKnown RBP20.72■□□□□ 0.91
Ushbp1-201ENSMUST00000049184 Naip1Q9QWK5 1403 aa20.71■□□□□ 0.91
Ushbp1-201ENSMUST00000049184 Fam50aQ9WV03 339 aaKnown RBP20.7■□□□□ 0.91
Ushbp1-201ENSMUST00000049184 Map3k1P53349 1493 aa20.69■□□□□ 0.9
Ushbp1-201ENSMUST00000049184 Ifnlr1Q8CGK5 535 aa20.69■□□□□ 0.9
Ushbp1-201ENSMUST00000049184 Supt16hQ920B9 1047 aa20.66■□□□□ 0.9
Ushbp1-201ENSMUST00000049184 Shroom4Q1W617 1475 aa20.64■□□□□ 0.9
Ushbp1-201ENSMUST00000049184 AqrQ8CFQ3 1481 aaKnown RBP20.64■□□□□ 0.9
Ushbp1-201ENSMUST00000049184 Hspa5P20029 655 aaKnown RBP20.64■□□□□ 0.89
Ushbp1-201ENSMUST00000049184 Ankrd36D3Z4K0 1415 aa20.63■□□□□ 0.89
Ushbp1-201ENSMUST00000049184 Ccer2J3QPU5 274 aa20.61■□□□□ 0.89
Ushbp1-201ENSMUST00000049184 Smg6P61406 1418 aaKnown RBP20.6■□□□□ 0.89
Ushbp1-201ENSMUST00000049184 Erich3F6QRE9 1637 aa20.58■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Washc2Q6PGL7 1334 aa20.58■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Pds5bQ4VA53 1446 aaKnown RBP20.57■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Atad2bE9Q166 1460 aaKnown RBP20.57■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Il27Q8K3I6 234 aa20.56■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Slx4Q6P1D7 1565 aa20.56■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Fhad1A6PWD2 1420 aa20.55■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Slc24a1Q91WD8 1130 aa20.55■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Ankrd26Q811D2 1581 aa20.54■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Dhx29Q6PGC1 1365 aaKnown RBP20.54■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Ppp4r2Q0VGB7 417 aa20.54■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 PrkcshO08795 521 aa20.53■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Mia2Q91ZV0 1396 aa20.53■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Wdr43Q6ZQL4 677 aaKnown RBP20.52■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Camsap2Q8C1B1 1461 aa20.52■□□□□ 0.88
Ushbp1-201ENSMUST00000049184 Pcf11G3X9Z4 1553 aa20.52■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 3425401B19RikD3Z1D3 1412 aa20.51■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Mroh2bQ7M6Y6 1581 aa20.49■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Sin3aQ60520 1274 aaKnown RBP20.48■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Camsap1A2AHC3 1581 aa20.48■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Ncoa2Q61026 1462 aa20.48■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Lmod2Q3UHZ5 550 aa20.48■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Vps8Q0P5W1 1427 aa20.47■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 Lamc3Q9R0B6 1581 aa20.47■□□□□ 0.87
Ushbp1-201ENSMUST00000049184 CntlnA2AM05 1397 aa20.45■□□□□ 0.86
Ushbp1-201ENSMUST00000049184 Eif5bQ05D44 1216 aaKnown RBP20.42■□□□□ 0.86
Ushbp1-201ENSMUST00000049184 Fyco1Q8VDC1 1437 aa20.41■□□□□ 0.86
Ushbp1-201ENSMUST00000049184 Kif15Q6P9L6 1387 aa20.39■□□□□ 0.86
Ushbp1-201ENSMUST00000049184 Efcab5A0JP43 1406 aa20.39■□□□□ 0.86
Ushbp1-201ENSMUST00000049184 Naip5Q9R016 1403 aa20.38■□□□□ 0.85
Ushbp1-201ENSMUST00000049184 Lmo7E9PYF4 1699 aaKnown RBP20.38■□□□□ 0.85
Ushbp1-201ENSMUST00000049184 Grin2bQ01097 1482 aa20.36■□□□□ 0.85
Ushbp1-201ENSMUST00000049184 Naip2Q9QUK4 1447 aa20.36■□□□□ 0.85
Ushbp1-201ENSMUST00000049184 Crocc2F6XLV1 1638 aa20.35■□□□□ 0.85
Ushbp1-201ENSMUST00000049184 Pak3Q61036 559 aa20.33■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Liat1Q810M6 228 aa20.32■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Frmpd1A2AKB4 1549 aa20.31■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Mrs2Q5NCE8 434 aa20.3■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Peg3Q3URU2 1571 aa20.29■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Ube2uB1AUC4 352 aa20.28■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Cux1P53564 1515 aa20.27■□□□□ 0.84
Ushbp1-201ENSMUST00000049184 Slc4a2P13808 1237 aaKnown RBP20.26■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Wdr62Q3U3T8 1523 aa20.25■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Carmil1Q6EDY6 1374 aa20.25■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Gm7298A0A0N4SVU1 1476 aa20.25■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 P3h3Q8CG70 732 aa20.24■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Pprc1Q6NZN1 1644 aa20.23■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Cul7Q8VE73 1689 aa20.23■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Egfem1Q8C088 590 aa20.23■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Gm13695A2AK44 830 aa20.22■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Ccdc27Q3V036 639 aa20.22■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 NrdcQ8BHG1 1161 aa20.22■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 Ercc6F8VPZ5 1481 aa20.21■□□□□ 0.83
Ushbp1-201ENSMUST00000049184 A2mQ6GQT1 1474 aa20.2■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Dennd4bQ3U1Y4 1499 aa20.2■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Gm1043A0A140LJC2 1431 aa20.19■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Wwc2Q6NXJ0 1187 aa20.18■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Upf2A2AT37 1269 aaKnown RBP20.18■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Urb2E9Q7L1 1524 aaKnown RBP20.18■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Thoc2B1AZI6 1594 aaKnown RBP20.17■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Aebp1Q640N1 1128 aa20.17■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Ncoa1P70365 1447 aa20.17■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Exoc6Q8R313 802 aa20.15■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Hdac5Q9Z2V6 1113 aa20.15■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Chic2Q9D9G3 165 aa20.15■□□□□ 0.82
Ushbp1-201ENSMUST00000049184 Fhod3Q76LL6 1578 aa20.13■□□□□ 0.81
Ushbp1-201ENSMUST00000049184 Ttbk1Q6PCN3 1308 aa20.13■□□□□ 0.81
Ushbp1-201ENSMUST00000049184 Ipo9Q91YE6 1041 aa20.11■□□□□ 0.81
Ushbp1-201ENSMUST00000049184 PnisrA2AJT4 805 aaKnown RBP20.1■□□□□ 0.81
Ushbp1-201ENSMUST00000049184 Mphosph9A6H5Y1 991 aa20.1■□□□□ 0.81
Ushbp1-201ENSMUST00000049184 Slc4a3P16283 1227 aa20.09■□□□□ 0.81
Ushbp1-201ENSMUST00000049184 Ccnb3Q810T2 1396 aa20.06■□□□□ 0.8
Ushbp1-201ENSMUST00000049184 Ccdc9Q8VC31 543 aaKnown RBP20.04■□□□□ 0.8
Ushbp1-201ENSMUST00000049184 Unc13aQ4KUS2 1712 aa20.03■□□□□ 0.8
Ushbp1-201ENSMUST00000049184 Tcerg1Q8CGF7 1100 aaKnown RBP20.03■□□□□ 0.8
Ushbp1-201ENSMUST00000049184 Ofd1Q80Z25 1017 aa20.01■□□□□ 0.79
Ushbp1-201ENSMUST00000049184 Setbp1Q9Z180 1582 aa20■□□□□ 0.79
Ushbp1-201ENSMUST00000049184 Usp47Q8BY87 1376 aa19.99■□□□□ 0.79
Ushbp1-201ENSMUST00000049184 Lmtk2Q3TYD6 1471 aa19.98■□□□□ 0.79
Ushbp1-201ENSMUST00000049184 Hsp90aa1P07901 733 aaKnown RBP19.96■□□□□ 0.79
Ushbp1-201ENSMUST00000049184 EprsQ8CGC7 1512 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 44.1 ms