RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 P3h3Q8CG70 732 aa20.92■□□□□ 0.94
Usp4-201ENSMUST00000035237 Cttnbp2B9EJA2 1648 aa20.9■□□□□ 0.94
Usp4-201ENSMUST00000035237 Top2aQ01320 1528 aaKnown RBP20.9■□□□□ 0.94
Usp4-201ENSMUST00000035237 Sin3aQ60520 1274 aaKnown RBP20.89■□□□□ 0.94
Usp4-201ENSMUST00000035237 Mrs2Q5NCE8 434 aa20.88■□□□□ 0.93
Usp4-201ENSMUST00000035237 Supt16hQ920B9 1047 aa20.87■□□□□ 0.93
Usp4-201ENSMUST00000035237 Baz1bQ9Z277 1479 aa20.86■□□□□ 0.93
Usp4-201ENSMUST00000035237 Chic2Q9D9G3 165 aa20.82■□□□□ 0.92
Usp4-201ENSMUST00000035237 Gm13697A2AK42 830 aa20.82■□□□□ 0.92
Usp4-201ENSMUST00000035237 Ccer2J3QPU5 274 aa20.78■□□□□ 0.92
Usp4-201ENSMUST00000035237 Amer1Q7TS75 1132 aa20.78■□□□□ 0.92
Usp4-201ENSMUST00000035237 PrkcshO08795 521 aa20.77■□□□□ 0.92
Usp4-201ENSMUST00000035237 Rpap1Q80TE0 1409 aa20.76■□□□□ 0.91
Usp4-201ENSMUST00000035237 Ccdc18Q640L5 1455 aa20.74■□□□□ 0.91
Usp4-201ENSMUST00000035237 Arap1Q4LDD4 1452 aa20.73■□□□□ 0.91
Usp4-201ENSMUST00000035237 Slc4a3P16283 1227 aa20.69■□□□□ 0.9
Usp4-201ENSMUST00000035237 Smarca4Q3TKT4 1613 aaKnown RBP20.67■□□□□ 0.9
Usp4-201ENSMUST00000035237 Wwc2Q6NXJ0 1187 aa20.66■□□□□ 0.9
Usp4-201ENSMUST00000035237 4933416C03RikQ3V063 378 aa20.65■□□□□ 0.9
Usp4-201ENSMUST00000035237 Arhgap35Q91YM2 1499 aa20.65■□□□□ 0.9
Usp4-201ENSMUST00000035237 BicraF8VPZ9 1578 aa20.64■□□□□ 0.89
Usp4-201ENSMUST00000035237 Kif15Q6P9L6 1387 aa20.63■□□□□ 0.89
Usp4-201ENSMUST00000035237 Smg6P61406 1418 aaKnown RBP20.59■□□□□ 0.89
Usp4-201ENSMUST00000035237 PtprkP35822 1457 aa20.58■□□□□ 0.88
Usp4-201ENSMUST00000035237 Npm1Q61937 292 aaKnown RBP20.56■□□□□ 0.88
Usp4-201ENSMUST00000035237 Arhgef5E9Q7D5 1581 aa20.52■□□□□ 0.88
Usp4-201ENSMUST00000035237 Mia2Q91ZV0 1396 aa20.52■□□□□ 0.88
Usp4-201ENSMUST00000035237 NeflP08551 543 aa20.51■□□□□ 0.87
Usp4-201ENSMUST00000035237 Pak3Q61036 559 aa20.51■□□□□ 0.87
Usp4-201ENSMUST00000035237 DaxxO35613 739 aa20.51■□□□□ 0.87
Usp4-201ENSMUST00000035237 Exoc6Q8R313 802 aa20.5■□□□□ 0.87
Usp4-201ENSMUST00000035237 Naip1Q9QWK5 1403 aa20.48■□□□□ 0.87
Usp4-201ENSMUST00000035237 Zbtb4Q5F293 982 aa20.48■□□□□ 0.87
Usp4-201ENSMUST00000035237 Ofd1Q80Z25 1017 aa20.48■□□□□ 0.87
Usp4-201ENSMUST00000035237 Ccdc27Q3V036 639 aa20.47■□□□□ 0.87
Usp4-201ENSMUST00000035237 AqrQ8CFQ3 1481 aaKnown RBP20.39■□□□□ 0.85
Usp4-201ENSMUST00000035237 UacaQ8CGB3 1411 aa20.39■□□□□ 0.85
Usp4-201ENSMUST00000035237 Washc2Q6PGL7 1334 aa20.39■□□□□ 0.85
Usp4-201ENSMUST00000035237 Iqgap2Q3UQ44 1575 aa20.39■□□□□ 0.85
Usp4-201ENSMUST00000035237 Fyco1Q8VDC1 1437 aa20.39■□□□□ 0.85
Usp4-201ENSMUST00000035237 Tiam1Q60610 1591 aa20.37■□□□□ 0.85
Usp4-201ENSMUST00000035237 CntlnA2AM05 1397 aa20.35■□□□□ 0.85
Usp4-201ENSMUST00000035237 Upf2A2AT37 1269 aaKnown RBP20.35■□□□□ 0.85
Usp4-201ENSMUST00000035237 Hsp90aa1P07901 733 aaKnown RBP20.35■□□□□ 0.85
Usp4-201ENSMUST00000035237 Aebp1Q640N1 1128 aa20.35■□□□□ 0.85
Usp4-201ENSMUST00000035237 Anp32bQ9EST5 272 aaKnown RBP20.34■□□□□ 0.85
Usp4-201ENSMUST00000035237 Slc4a2P13808 1237 aaKnown RBP20.33■□□□□ 0.85
Usp4-201ENSMUST00000035237 Rad21Q61550 635 aaKnown RBP20.33■□□□□ 0.85
Usp4-201ENSMUST00000035237 Rgl3Q3UYI5 709 aa20.33■□□□□ 0.85
Usp4-201ENSMUST00000035237 Zbtb7cQ8VCZ7 619 aa20.33■□□□□ 0.84
Usp4-201ENSMUST00000035237 Ankrd36D3Z4K0 1415 aa20.32■□□□□ 0.84
Usp4-201ENSMUST00000035237 Kdm5bQ80Y84 1544 aa20.32■□□□□ 0.84
Usp4-201ENSMUST00000035237 Dhx29Q6PGC1 1365 aaKnown RBP20.32■□□□□ 0.84
Usp4-201ENSMUST00000035237 Fhad1A6PWD2 1420 aa20.31■□□□□ 0.84
Usp4-201ENSMUST00000035237 Shroom4Q1W617 1475 aa20.31■□□□□ 0.84
Usp4-201ENSMUST00000035237 Mphosph9A6H5Y1 991 aa20.31■□□□□ 0.84
Usp4-201ENSMUST00000035237 Hdac5Q9Z2V6 1113 aa20.3■□□□□ 0.84
Usp4-201ENSMUST00000035237 NrkQ9R0G8 1455 aa20.3■□□□□ 0.84
Usp4-201ENSMUST00000035237 Gm13695A2AK44 830 aa20.3■□□□□ 0.84
Usp4-201ENSMUST00000035237 Pkd2O35245 966 aa20.27■□□□□ 0.84
Usp4-201ENSMUST00000035237 Tcerg1Q8CGF7 1100 aaKnown RBP20.26■□□□□ 0.83
Usp4-201ENSMUST00000035237 TchhA0A0B4J1F9 1599 aa20.25■□□□□ 0.83
Usp4-201ENSMUST00000035237 Ipo9Q91YE6 1041 aa20.25■□□□□ 0.83
Usp4-201ENSMUST00000035237 Kcnh8P59111 1102 aa20.23■□□□□ 0.83
Usp4-201ENSMUST00000035237 Eif4g1Q6NZJ6 1600 aaKnown RBP20.22■□□□□ 0.83
Usp4-201ENSMUST00000035237 Vps8Q0P5W1 1427 aa20.21■□□□□ 0.83
Usp4-201ENSMUST00000035237 Atad2bE9Q166 1460 aaKnown RBP20.2■□□□□ 0.82
Usp4-201ENSMUST00000035237 Grwd1Q810D6 446 aaKnown RBP20.2■□□□□ 0.82
Usp4-201ENSMUST00000035237 Ubl4bQ9CQ84 188 aa20.2■□□□□ 0.82
Usp4-201ENSMUST00000035237 Liat1Q810M6 228 aa20.2■□□□□ 0.82
Usp4-201ENSMUST00000035237 ChgaP26339 463 aaKnown RBP20.18■□□□□ 0.82
Usp4-201ENSMUST00000035237 Cabp1Q9JLK7 227 aa20.18■□□□□ 0.82
Usp4-201ENSMUST00000035237 3425401B19RikD3Z1D3 1412 aa20.18■□□□□ 0.82
Usp4-201ENSMUST00000035237 Map3k1P53349 1493 aa20.18■□□□□ 0.82
Usp4-201ENSMUST00000035237 Ccnb3Q810T2 1396 aa20.17■□□□□ 0.82
Usp4-201ENSMUST00000035237 Carmil1Q6EDY6 1374 aa20.16■□□□□ 0.82
Usp4-201ENSMUST00000035237 Irx3P81067 507 aa20.16■□□□□ 0.82
Usp4-201ENSMUST00000035237 Slx4Q6P1D7 1565 aa20.15■□□□□ 0.82
Usp4-201ENSMUST00000035237 CanxP35564 591 aaKnown RBP20.15■□□□□ 0.82
Usp4-201ENSMUST00000035237 Ccdc9Q8VC31 543 aaKnown RBP20.15■□□□□ 0.82
Usp4-201ENSMUST00000035237 Pcf11G3X9Z4 1553 aa20.15■□□□□ 0.82
Usp4-201ENSMUST00000035237 Mroh2bQ7M6Y6 1581 aa20.14■□□□□ 0.81
Usp4-201ENSMUST00000035237 ArxO35085 564 aa20.14■□□□□ 0.81
Usp4-201ENSMUST00000035237 Usp47Q8BY87 1376 aa20.14■□□□□ 0.81
Usp4-201ENSMUST00000035237 Card11Q8CIS0 1159 aa20.13■□□□□ 0.81
Usp4-201ENSMUST00000035237 B4galnt3Q6L8S8 986 aa20.12■□□□□ 0.81
Usp4-201ENSMUST00000035237 Rundc1Q0VDN7 615 aa20.11■□□□□ 0.81
Usp4-201ENSMUST00000035237 Gtf3c3Q3TMP1 882 aa20.11■□□□□ 0.81
Usp4-201ENSMUST00000035237 Pds5bQ4VA53 1446 aaKnown RBP20.1■□□□□ 0.81
Usp4-201ENSMUST00000035237 Zfp644E9QA22 1323 aa20.09■□□□□ 0.81
Usp4-201ENSMUST00000035237 Cwc22Q8C5N3 908 aaKnown RBP20.09■□□□□ 0.81
Usp4-201ENSMUST00000035237 Naip5Q9R016 1403 aa20.08■□□□□ 0.81
Usp4-201ENSMUST00000035237 Arhgap27A2AB59 869 aa20.07■□□□□ 0.8
Usp4-201ENSMUST00000035237 Dbr1Q923B1 550 aa20.07■□□□□ 0.8
Usp4-201ENSMUST00000035237 PnisrA2AJT4 805 aaKnown RBP20.07■□□□□ 0.8
Usp4-201ENSMUST00000035237 Ankrd26Q811D2 1581 aa20.06■□□□□ 0.8
Usp4-201ENSMUST00000035237 Naip2Q9QUK4 1447 aa20.05■□□□□ 0.8
Usp4-201ENSMUST00000035237 Efcab5A0JP43 1406 aa20.04■□□□□ 0.8
Usp4-201ENSMUST00000035237 Egfem1Q8C088 590 aa20.04■□□□□ 0.8
Usp4-201ENSMUST00000035237 Kif27Q7M6Z4 1394 aa20.03■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms