RNA–Protein interactions for RNA: ENSMUST00000031327.8

Cxcl1-201, Transcript of Growth-regulated alpha protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cxcl1, Length 953 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1-201ENSMUST00000031327 Abcc1O35379 1528 aa18.98■□□□□ 0.63
Cxcl1-201ENSMUST00000031327 Ythdc2B2RR83 1445 aaKnown RBP18.96■□□□□ 0.63
Cxcl1-201ENSMUST00000031327 Rapgef2Q8CHG7 1496 aa18.94■□□□□ 0.62
Cxcl1-201ENSMUST00000031327 CadpsQ80TJ1 1355 aa18.87■□□□□ 0.61
Cxcl1-201ENSMUST00000031327 Chd1P40201 1711 aa18.84■□□□□ 0.61
Cxcl1-201ENSMUST00000031327 Setbp1Q9Z180 1582 aa18.83■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Top2aQ01320 1528 aaKnown RBP18.81■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Ppp1r18Q8BQ30 594 aa18.81■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Pla2r1Q62028 1487 aa18.81■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Soga1E1U8D0 1418 aa18.81■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Plekhg3Q4VAC9 1341 aa18.78■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Gpatch8A2A6A1 1505 aa18.77■□□□□ 0.6
Cxcl1-201ENSMUST00000031327 Dnmt1P13864 1620 aaKnown RBP18.74■□□□□ 0.59
Cxcl1-201ENSMUST00000031327 NrkQ9R0G8 1455 aa18.73■□□□□ 0.59
Cxcl1-201ENSMUST00000031327 Neo1P97798 1493 aa18.72■□□□□ 0.59
Cxcl1-201ENSMUST00000031327 SynmQ70IV5 1561 aa18.71■□□□□ 0.59
Cxcl1-201ENSMUST00000031327 Ak9G3UYQ4 1894 aa18.7■□□□□ 0.58
Cxcl1-201ENSMUST00000031327 Arhgap27A2AB59 869 aa18.69■□□□□ 0.58
Cxcl1-201ENSMUST00000031327 Gm14025A2AP89 1413 aa18.68■□□□□ 0.58
Cxcl1-201ENSMUST00000031327 AI481877A2ALV5 1481 aa18.68■□□□□ 0.58
Cxcl1-201ENSMUST00000031327 BC005561E9Q5E2 1589 aa18.66■□□□□ 0.58
Cxcl1-201ENSMUST00000031327 Abcc2Q8VI47 1543 aa18.65■□□□□ 0.58
Cxcl1-201ENSMUST00000031327 Map3k4O08648 1597 aa18.64■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 Ifnlr1Q8CGK5 535 aa18.63■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 Shroom4Q1W617 1475 aa18.63■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 EprsQ8CGC7 1512 aaKnown RBP18.63■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 Abca16E9PWJ7 1678 aa18.61■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 PxdnQ3UQ28 1475 aa18.6■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 TchhA0A0B4J1F9 1599 aa18.59■□□□□ 0.57
Cxcl1-201ENSMUST00000031327 Zeb1Q64318 1117 aa18.58■□□□□ 0.56
Cxcl1-201ENSMUST00000031327 Ccdc88bQ4QRL3 1481 aa18.58■□□□□ 0.56
Cxcl1-201ENSMUST00000031327 Arhgef12Q8R4H2 1543 aaKnown RBP18.57■□□□□ 0.56
Cxcl1-201ENSMUST00000031327 WizO88286 1684 aaKnown RBP18.57■□□□□ 0.56
Cxcl1-201ENSMUST00000031327 Clasp1Q80TV8 1535 aaKnown RBP18.54■□□□□ 0.56
Cxcl1-201ENSMUST00000031327 AdgbG3UZ78 1657 aa18.53■□□□□ 0.56
Cxcl1-201ENSMUST00000031327 Adamts12Q811B3 1600 aa18.52■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Ttc37F8VPK0 1563 aa18.51■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Slx4Q6P1D7 1565 aa18.5■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Mapkbp1Q6NS57 1503 aa18.49■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Eif4g1Q6NZJ6 1600 aaKnown RBP18.49■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Arhgef11Q68FM7 1552 aa18.48■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Alpk3Q924C5 1678 aa18.47■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Jph4Q80WT0 628 aa18.46■□□□□ 0.55
Cxcl1-201ENSMUST00000031327 Arid3cA6PWV5 409 aa18.45■□□□□ 0.54
Cxcl1-201ENSMUST00000031327 Plppr3Q7TPB0 716 aa18.43■□□□□ 0.54
Cxcl1-201ENSMUST00000031327 Depdc5P61460 1591 aa18.42■□□□□ 0.54
Cxcl1-201ENSMUST00000031327 Fkbp15Q6P9Q6 1216 aaKnown RBP18.42■□□□□ 0.54
Cxcl1-201ENSMUST00000031327 Rpap1Q80TE0 1409 aa18.39■□□□□ 0.53
Cxcl1-201ENSMUST00000031327 Mroh2bQ7M6Y6 1581 aa18.36■□□□□ 0.53
Cxcl1-201ENSMUST00000031327 Zfyve16Q80U44 1528 aa18.36■□□□□ 0.53
Cxcl1-201ENSMUST00000031327 Lrrc9Q8CDN9 1456 aa18.36■□□□□ 0.53
Cxcl1-201ENSMUST00000031327 Fndc1E9Q043 1732 aa18.35■□□□□ 0.53
Cxcl1-201ENSMUST00000031327 Igf1rQ60751 1373 aa18.34■□□□□ 0.53
Cxcl1-201ENSMUST00000031327 Dnajc5gQ8C632 165 aa18.32■□□□□ 0.52
Cxcl1-201ENSMUST00000031327 Znf608Q56A10 1511 aa18.31■□□□□ 0.52
Cxcl1-201ENSMUST00000031327 Gm7298A0A0N4SVU1 1476 aa18.31■□□□□ 0.52
Cxcl1-201ENSMUST00000031327 MlecQ6ZQI3 291 aaKnown RBP18.28■□□□□ 0.52
Cxcl1-201ENSMUST00000031327 Kdm5bQ80Y84 1544 aa18.27■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Abca5Q8K448 1642 aa18.26■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Npm2Q80W85 207 aa18.25■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Cyb5rlB1AS42 316 aa18.24■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Carmil1Q6EDY6 1374 aa18.24■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Wdr7Q920I9 1489 aa18.24■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 WrnO09053 1401 aa18.23■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Rrbp1Q99PL5 1605 aaKnown RBP18.22■□□□□ 0.51
Cxcl1-201ENSMUST00000031327 Map3k1P53349 1493 aa18.2■□□□□ 0.5
Cxcl1-201ENSMUST00000031327 AglF8VPN4 1532 aa18.15■□□□□ 0.5
Cxcl1-201ENSMUST00000031327 NhsB1AV60 1647 aa18.12■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Brwd3A2AHJ4 1799 aa18.12■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Atp10dQ8K2X1 1416 aa18.11■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Polr1aO35134 1717 aaKnown RBP18.1■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Cul7Q8VE73 1689 aa18.09■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Kdm6bQ5NCY0 1641 aa18.09■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Rnf17Q99MV7 1640 aa18.09■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Ercc6l2Q9JIM3 1537 aa18.08■□□□□ 0.49
Cxcl1-201ENSMUST00000031327 Arhgap31A6X8Z5 1425 aa18.07■□□□□ 0.48
Cxcl1-201ENSMUST00000031327 Arhgap35Q91YM2 1499 aa18.04■□□□□ 0.48
Cxcl1-201ENSMUST00000031327 Hecw2Q6I6G8 1578 aa18.03■□□□□ 0.48
Cxcl1-201ENSMUST00000031327 Ccdc141E9Q8Q6 1531 aa18.02■□□□□ 0.47
Cxcl1-201ENSMUST00000031327 Cux1P53564 1515 aa18.02■□□□□ 0.47
Cxcl1-201ENSMUST00000031327 Naip2Q9QUK4 1447 aa17.99■□□□□ 0.47
Cxcl1-201ENSMUST00000031327 A2mQ6GQT1 1474 aa17.98■□□□□ 0.47
Cxcl1-201ENSMUST00000031327 Fyco1Q8VDC1 1437 aa17.93■□□□□ 0.46
Cxcl1-201ENSMUST00000031327 Gcc2Q8CHG3 1679 aa17.93■□□□□ 0.46
Cxcl1-201ENSMUST00000031327 Clip1Q922J3 1391 aa17.92■□□□□ 0.46
Cxcl1-201ENSMUST00000031327 Abca8bQ8K440 1620 aa17.92■□□□□ 0.46
Cxcl1-201ENSMUST00000031327 Mroh2aD3Z750 1679 aa17.92■□□□□ 0.46
Cxcl1-201ENSMUST00000031327 Kiaa1210E9Q0C6 1637 aa17.89■□□□□ 0.45
Cxcl1-201ENSMUST00000031327 Fancd2Q80V62 1450 aa17.88■□□□□ 0.45
Cxcl1-201ENSMUST00000031327 Fbxo41Q6NS60 873 aa17.88■□□□□ 0.45
Cxcl1-201ENSMUST00000031327 PtprmP28828 1452 aa17.83■□□□□ 0.45
Cxcl1-201ENSMUST00000031327 Ncoa2Q61026 1462 aa17.83■□□□□ 0.45
Cxcl1-201ENSMUST00000031327 Synj2Q9D2G5 1434 aa17.82■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 BlmO88700 1416 aa17.81■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 Gab3Q8BSM5 595 aa17.81■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 Mlh3A0A1Y7VMP7 1443 aa17.81■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 Qser1A2BIE1 1698 aa17.8■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 Kif14L0N7N1 1674 aaKnown RBP17.8■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 Rapgef6Q5NCJ1 1609 aa17.8■□□□□ 0.44
Cxcl1-201ENSMUST00000031327 Arap1Q4LDD4 1452 aa17.77■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 130.1 ms