RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Gpatch8A2A6A1 1505 aa34.85■■■■□ 3.17
Ttc39b-201ENSMUST00000030205 Ccdc88bQ4QRL3 1481 aa34.84■■■■□ 3.17
Ttc39b-201ENSMUST00000030205 Top2aQ01320 1528 aaKnown RBP34.82■■■■□ 3.16
Ttc39b-201ENSMUST00000030205 Ythdc2B2RR83 1445 aaKnown RBP34.79■■■■□ 3.16
Ttc39b-201ENSMUST00000030205 CadpsQ80TJ1 1355 aa34.75■■■■□ 3.15
Ttc39b-201ENSMUST00000030205 SynmQ70IV5 1561 aa34.75■■■■□ 3.15
Ttc39b-201ENSMUST00000030205 Shroom4Q1W617 1475 aa34.75■■■■□ 3.15
Ttc39b-201ENSMUST00000030205 Pprc1Q6NZN1 1644 aa34.72■■■■□ 3.15
Ttc39b-201ENSMUST00000030205 Rapgef2Q8CHG7 1496 aa34.7■■■■□ 3.15
Ttc39b-201ENSMUST00000030205 Chd1P40201 1711 aa34.68■■■■□ 3.14
Ttc39b-201ENSMUST00000030205 Dnmt1P13864 1620 aaKnown RBP34.62■■■■□ 3.13
Ttc39b-201ENSMUST00000030205 Soga1E1U8D0 1418 aa34.59■■■■□ 3.13
Ttc39b-201ENSMUST00000030205 Neo1P97798 1493 aa34.52■■■■□ 3.12
Ttc39b-201ENSMUST00000030205 Abcc2Q8VI47 1543 aa34.52■■■■□ 3.12
Ttc39b-201ENSMUST00000030205 Chic1Q8CBW7 227 aa34.52■■■■□ 3.12
Ttc39b-201ENSMUST00000030205 Setbp1Q9Z180 1582 aa34.51■■■■□ 3.12
Ttc39b-201ENSMUST00000030205 Arhgap27A2AB59 869 aa34.5■■■■□ 3.11
Ttc39b-201ENSMUST00000030205 Zeb1Q64318 1117 aa34.49■■■■□ 3.11
Ttc39b-201ENSMUST00000030205 Abca16E9PWJ7 1678 aa34.49■■■■□ 3.11
Ttc39b-201ENSMUST00000030205 BC005561E9Q5E2 1589 aa34.46■■■■□ 3.11
Ttc39b-201ENSMUST00000030205 Map3k4O08648 1597 aa34.46■■■■□ 3.11
Ttc39b-201ENSMUST00000030205 PxdnQ3UQ28 1475 aa34.45■■■■□ 3.1
Ttc39b-201ENSMUST00000030205 TchhA0A0B4J1F9 1599 aa34.45■■■■□ 3.1
Ttc39b-201ENSMUST00000030205 Gm14025A2AP89 1413 aa34.43■■■■□ 3.1
Ttc39b-201ENSMUST00000030205 WizO88286 1684 aaKnown RBP34.42■■■■□ 3.1
Ttc39b-201ENSMUST00000030205 Adamts12Q811B3 1600 aa34.37■■■■□ 3.09
Ttc39b-201ENSMUST00000030205 EprsQ8CGC7 1512 aaKnown RBP34.34■■■■□ 3.09
Ttc39b-201ENSMUST00000030205 AI481877A2ALV5 1481 aa34.33■■■■□ 3.09
Ttc39b-201ENSMUST00000030205 Ppp1r18Q8BQ30 594 aa34.33■■■■□ 3.09
Ttc39b-201ENSMUST00000030205 Ak9G3UYQ4 1894 aa34.29■■■■□ 3.08
Ttc39b-201ENSMUST00000030205 Mroh2bQ7M6Y6 1581 aa34.26■■■■□ 3.07
Ttc39b-201ENSMUST00000030205 Arhgef12Q8R4H2 1543 aaKnown RBP34.25■■■■□ 3.07
Ttc39b-201ENSMUST00000030205 Slx4Q6P1D7 1565 aa34.23■■■■□ 3.07
Ttc39b-201ENSMUST00000030205 Eif4g1Q6NZJ6 1600 aaKnown RBP34.23■■■■□ 3.07
Ttc39b-201ENSMUST00000030205 Ifnlr1Q8CGK5 535 aa34.12■■■■□ 3.05
Ttc39b-201ENSMUST00000030205 Jph4Q80WT0 628 aa34.1■■■■□ 3.05
Ttc39b-201ENSMUST00000030205 Rpap1Q80TE0 1409 aa34.09■■■■□ 3.05
Ttc39b-201ENSMUST00000030205 Npm2Q80W85 207 aa34.08■■■■□ 3.05
Ttc39b-201ENSMUST00000030205 Clasp1Q80TV8 1535 aaKnown RBP34.03■■■■□ 3.04
Ttc39b-201ENSMUST00000030205 Carmil1Q6EDY6 1374 aa34.02■■■■□ 3.04
Ttc39b-201ENSMUST00000030205 Gm7298A0A0N4SVU1 1476 aa34.01■■■■□ 3.03
Ttc39b-201ENSMUST00000030205 Map3k1P53349 1493 aa33.98■■■■□ 3.03
Ttc39b-201ENSMUST00000030205 Ttc37F8VPK0 1563 aa33.94■■■■□ 3.02
Ttc39b-201ENSMUST00000030205 Fkbp15Q6P9Q6 1216 aaKnown RBP33.92■■■■□ 3.02
Ttc39b-201ENSMUST00000030205 AdgbG3UZ78 1657 aa33.92■■■■□ 3.02
Ttc39b-201ENSMUST00000030205 Plekhg3Q4VAC9 1341 aa33.91■■■■□ 3.02
Ttc39b-201ENSMUST00000030205 Abca5Q8K448 1642 aa33.89■■■■□ 3.02
Ttc39b-201ENSMUST00000030205 Mapkbp1Q6NS57 1503 aa33.89■■■■□ 3.02
Ttc39b-201ENSMUST00000030205 Arid3cA6PWV5 409 aa33.85■■■■□ 3.01
Ttc39b-201ENSMUST00000030205 Igf1rQ60751 1373 aa33.84■■■■□ 3.01
Ttc39b-201ENSMUST00000030205 Lrrc9Q8CDN9 1456 aa33.83■■■■□ 3.01
Ttc39b-201ENSMUST00000030205 WrnO09053 1401 aa33.81■■■■□ 3
Ttc39b-201ENSMUST00000030205 Arhgap35Q91YM2 1499 aa33.8■■■■□ 3
Ttc39b-201ENSMUST00000030205 Depdc5P61460 1591 aa33.78■■■■□ 3
Ttc39b-201ENSMUST00000030205 Polr1aO35134 1717 aaKnown RBP33.78■■■■□ 3
Ttc39b-201ENSMUST00000030205 Kdm5bQ80Y84 1544 aa33.78■■■■□ 3
Ttc39b-201ENSMUST00000030205 Rrbp1Q99PL5 1605 aaKnown RBP33.77■■■■□ 3
Ttc39b-201ENSMUST00000030205 Arhgef11Q68FM7 1552 aa33.74■■■□□ 2.99
Ttc39b-201ENSMUST00000030205 Znf608Q56A10 1511 aa33.72■■■□□ 2.99
Ttc39b-201ENSMUST00000030205 Zfyve16Q80U44 1528 aa33.7■■■□□ 2.99
Ttc39b-201ENSMUST00000030205 Wdr7Q920I9 1489 aa33.65■■■□□ 2.98
Ttc39b-201ENSMUST00000030205 Cux1P53564 1515 aa33.62■■■□□ 2.97
Ttc39b-201ENSMUST00000030205 Alpk3Q924C5 1678 aa33.6■■■□□ 2.97
Ttc39b-201ENSMUST00000030205 Fndc1E9Q043 1732 aa33.59■■■□□ 2.97
Ttc39b-201ENSMUST00000030205 Clip1Q922J3 1391 aa33.54■■■□□ 2.96
Ttc39b-201ENSMUST00000030205 NhsB1AV60 1647 aa33.53■■■□□ 2.96
Ttc39b-201ENSMUST00000030205 Arhgap31A6X8Z5 1425 aa33.52■■■□□ 2.96
Ttc39b-201ENSMUST00000030205 Cul7Q8VE73 1689 aa33.5■■■□□ 2.95
Ttc39b-201ENSMUST00000030205 Plppr3Q7TPB0 716 aa33.49■■■□□ 2.95
Ttc39b-201ENSMUST00000030205 Gab3Q8BSM5 595 aa33.49■■■□□ 2.95
Ttc39b-201ENSMUST00000030205 Fyco1Q8VDC1 1437 aa33.48■■■□□ 2.95
Ttc39b-201ENSMUST00000030205 Atp10dQ8K2X1 1416 aa33.45■■■□□ 2.94
Ttc39b-201ENSMUST00000030205 Dnajc5gQ8C632 165 aa33.44■■■□□ 2.94
Ttc39b-201ENSMUST00000030205 Ccdc141E9Q8Q6 1531 aa33.43■■■□□ 2.94
Ttc39b-201ENSMUST00000030205 AglF8VPN4 1532 aa33.43■■■□□ 2.94
Ttc39b-201ENSMUST00000030205 Cep162Q6ZQ06 1403 aa33.35■■■□□ 2.93
Ttc39b-201ENSMUST00000030205 Mroh2aD3Z750 1679 aa33.27■■■□□ 2.92
Ttc39b-201ENSMUST00000030205 Gcc2Q8CHG3 1679 aa33.26■■■□□ 2.92
Ttc39b-201ENSMUST00000030205 Myt1lP97500 1187 aa33.24■■■□□ 2.91
Ttc39b-201ENSMUST00000030205 Kiaa1210E9Q0C6 1637 aa33.2■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 MlecQ6ZQI3 291 aaKnown RBP33.19■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 Abca8bQ8K440 1620 aa33.19■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 Fancd2Q80V62 1450 aa33.18■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 Rnf17Q99MV7 1640 aa33.18■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 BlmO88700 1416 aa33.16■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 Ncoa2Q61026 1462 aa33.16■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 Rapgef6Q5NCJ1 1609 aa33.15■■■□□ 2.9
Ttc39b-201ENSMUST00000030205 A2mQ6GQT1 1474 aa33.13■■■□□ 2.89
Ttc39b-201ENSMUST00000030205 Ankrd26Q811D2 1581 aa33.13■■■□□ 2.89
Ttc39b-201ENSMUST00000030205 Aebp1Q640N1 1128 aa33.1■■■□□ 2.89
Ttc39b-201ENSMUST00000030205 Kif27Q7M6Z4 1394 aa33.05■■■□□ 2.88
Ttc39b-201ENSMUST00000030205 Arap1Q4LDD4 1452 aa33.05■■■□□ 2.88
Ttc39b-201ENSMUST00000030205 Kdm6bQ5NCY0 1641 aa33.03■■■□□ 2.88
Ttc39b-201ENSMUST00000030205 Magi1Q6RHR9 1471 aa33.03■■■□□ 2.88
Ttc39b-201ENSMUST00000030205 HrcG5E8J6 738 aa32.99■■■□□ 2.87
Ttc39b-201ENSMUST00000030205 Naip2Q9QUK4 1447 aa32.95■■■□□ 2.87
Ttc39b-201ENSMUST00000030205 Cyb5rlB1AS42 316 aa32.95■■■□□ 2.87
Ttc39b-201ENSMUST00000030205 Brwd3A2AHJ4 1799 aa32.93■■■□□ 2.86
Ttc39b-201ENSMUST00000030205 Mlh3A0A1Y7VMP7 1443 aa32.93■■■□□ 2.86
Ttc39b-201ENSMUST00000030205 Prex2Q3LAC4 1598 aa32.92■■■□□ 2.86
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms