RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Rapgef2Q8CHG7 1496 aa34.2■■■■□ 3.07
Ltb-201ENSMUST00000025262 CadpsQ80TJ1 1355 aa34.02■■■■□ 3.04
Ltb-201ENSMUST00000025262 Setbp1Q9Z180 1582 aa34.02■■■■□ 3.04
Ltb-201ENSMUST00000025262 Top2aQ01320 1528 aaKnown RBP33.94■■■■□ 3.02
Ltb-201ENSMUST00000025262 Pla2r1Q62028 1487 aa33.94■■■■□ 3.02
Ltb-201ENSMUST00000025262 Chd1P40201 1711 aa33.91■■■■□ 3.02
Ltb-201ENSMUST00000025262 Ppp1r18Q8BQ30 594 aa33.91■■■■□ 3.02
Ltb-201ENSMUST00000025262 Plekhg3Q4VAC9 1341 aa33.9■■■■□ 3.02
Ltb-201ENSMUST00000025262 Soga1E1U8D0 1418 aa33.88■■■■□ 3.01
Ltb-201ENSMUST00000025262 Gpatch8A2A6A1 1505 aa33.88■■■■□ 3.01
Ltb-201ENSMUST00000025262 Dnmt1P13864 1620 aaKnown RBP33.79■■■■□ 3
Ltb-201ENSMUST00000025262 Neo1P97798 1493 aa33.77■■■■□ 3
Ltb-201ENSMUST00000025262 NrkQ9R0G8 1455 aa33.72■■■□□ 2.99
Ltb-201ENSMUST00000025262 AI481877A2ALV5 1481 aa33.7■■■□□ 2.99
Ltb-201ENSMUST00000025262 Gm14025A2AP89 1413 aa33.69■■■□□ 2.98
Ltb-201ENSMUST00000025262 SynmQ70IV5 1561 aa33.68■■■□□ 2.98
Ltb-201ENSMUST00000025262 Abcc2Q8VI47 1543 aa33.68■■■□□ 2.98
Ltb-201ENSMUST00000025262 BC005561E9Q5E2 1589 aa33.67■■■□□ 2.98
Ltb-201ENSMUST00000025262 Arhgap27A2AB59 869 aa33.66■■■□□ 2.98
Ltb-201ENSMUST00000025262 Ak9G3UYQ4 1894 aa33.65■■■□□ 2.98
Ltb-201ENSMUST00000025262 EprsQ8CGC7 1512 aaKnown RBP33.63■■■□□ 2.97
Ltb-201ENSMUST00000025262 Map3k4O08648 1597 aa33.62■■■□□ 2.97
Ltb-201ENSMUST00000025262 PxdnQ3UQ28 1475 aa33.57■■■□□ 2.97
Ltb-201ENSMUST00000025262 Ccdc88bQ4QRL3 1481 aa33.56■■■□□ 2.96
Ltb-201ENSMUST00000025262 Ifnlr1Q8CGK5 535 aa33.55■■■□□ 2.96
Ltb-201ENSMUST00000025262 Shroom4Q1W617 1475 aa33.55■■■□□ 2.96
Ltb-201ENSMUST00000025262 Abca16E9PWJ7 1678 aa33.52■■■□□ 2.96
Ltb-201ENSMUST00000025262 Arhgef12Q8R4H2 1543 aaKnown RBP33.51■■■□□ 2.95
Ltb-201ENSMUST00000025262 Clasp1Q80TV8 1535 aaKnown RBP33.48■■■□□ 2.95
Ltb-201ENSMUST00000025262 TchhA0A0B4J1F9 1599 aa33.47■■■□□ 2.95
Ltb-201ENSMUST00000025262 WizO88286 1684 aaKnown RBP33.42■■■□□ 2.94
Ltb-201ENSMUST00000025262 Ttc37F8VPK0 1563 aa33.41■■■□□ 2.94
Ltb-201ENSMUST00000025262 AdgbG3UZ78 1657 aa33.41■■■□□ 2.94
Ltb-201ENSMUST00000025262 Mapkbp1Q6NS57 1503 aa33.39■■■□□ 2.94
Ltb-201ENSMUST00000025262 Alpk3Q924C5 1678 aa33.39■■■□□ 2.94
Ltb-201ENSMUST00000025262 Slx4Q6P1D7 1565 aa33.35■■■□□ 2.93
Ltb-201ENSMUST00000025262 Zeb1Q64318 1117 aa33.35■■■□□ 2.93
Ltb-201ENSMUST00000025262 Eif4g1Q6NZJ6 1600 aaKnown RBP33.34■■■□□ 2.93
Ltb-201ENSMUST00000025262 Adamts12Q811B3 1600 aa33.34■■■□□ 2.93
Ltb-201ENSMUST00000025262 Arhgef11Q68FM7 1552 aa33.34■■■□□ 2.93
Ltb-201ENSMUST00000025262 Arid3cA6PWV5 409 aa33.26■■■□□ 2.91
Ltb-201ENSMUST00000025262 Jph4Q80WT0 628 aa33.26■■■□□ 2.91
Ltb-201ENSMUST00000025262 Depdc5P61460 1591 aa33.26■■■□□ 2.91
Ltb-201ENSMUST00000025262 Plppr3Q7TPB0 716 aa33.24■■■□□ 2.91
Ltb-201ENSMUST00000025262 Dnajc5gQ8C632 165 aa33.2■■■□□ 2.91
Ltb-201ENSMUST00000025262 Fkbp15Q6P9Q6 1216 aaKnown RBP33.18■■■□□ 2.9
Ltb-201ENSMUST00000025262 Lrrc9Q8CDN9 1456 aa33.15■■■□□ 2.9
Ltb-201ENSMUST00000025262 Zfyve16Q80U44 1528 aa33.13■■■□□ 2.89
Ltb-201ENSMUST00000025262 Fndc1E9Q043 1732 aa33.11■■■□□ 2.89
Ltb-201ENSMUST00000025262 Rpap1Q80TE0 1409 aa33.11■■■□□ 2.89
Ltb-201ENSMUST00000025262 Znf608Q56A10 1511 aa33.06■■■□□ 2.88
Ltb-201ENSMUST00000025262 Chic1Q8CBW7 227 aa33.04■■■□□ 2.88
Ltb-201ENSMUST00000025262 Mroh2bQ7M6Y6 1581 aa33.04■■■□□ 2.88
Ltb-201ENSMUST00000025262 Igf1rQ60751 1373 aa33.03■■■□□ 2.88
Ltb-201ENSMUST00000025262 MlecQ6ZQI3 291 aaKnown RBP32.98■■■□□ 2.87
Ltb-201ENSMUST00000025262 Gm7298A0A0N4SVU1 1476 aa32.98■■■□□ 2.87
Ltb-201ENSMUST00000025262 Kdm5bQ80Y84 1544 aa32.94■■■□□ 2.86
Ltb-201ENSMUST00000025262 Cyb5rlB1AS42 316 aa32.93■■■□□ 2.86
Ltb-201ENSMUST00000025262 Wdr7Q920I9 1489 aa32.89■■■□□ 2.86
Ltb-201ENSMUST00000025262 Abca5Q8K448 1642 aa32.88■■■□□ 2.85
Ltb-201ENSMUST00000025262 WrnO09053 1401 aa32.84■■■□□ 2.85
Ltb-201ENSMUST00000025262 Carmil1Q6EDY6 1374 aa32.83■■■□□ 2.85
Ltb-201ENSMUST00000025262 Rrbp1Q99PL5 1605 aaKnown RBP32.78■■■□□ 2.84
Ltb-201ENSMUST00000025262 Map3k1P53349 1493 aa32.78■■■□□ 2.84
Ltb-201ENSMUST00000025262 AglF8VPN4 1532 aa32.75■■■□□ 2.83
Ltb-201ENSMUST00000025262 Npm2Q80W85 207 aa32.74■■■□□ 2.83
Ltb-201ENSMUST00000025262 Ercc6l2Q9JIM3 1537 aa32.72■■■□□ 2.83
Ltb-201ENSMUST00000025262 Brwd3A2AHJ4 1799 aa32.7■■■□□ 2.82
Ltb-201ENSMUST00000025262 NhsB1AV60 1647 aa32.66■■■□□ 2.82
Ltb-201ENSMUST00000025262 Atp10dQ8K2X1 1416 aa32.65■■■□□ 2.82
Ltb-201ENSMUST00000025262 Kdm6bQ5NCY0 1641 aa32.62■■■□□ 2.81
Ltb-201ENSMUST00000025262 Rnf17Q99MV7 1640 aa32.62■■■□□ 2.81
Ltb-201ENSMUST00000025262 Hecw2Q6I6G8 1578 aa32.61■■■□□ 2.81
Ltb-201ENSMUST00000025262 Cul7Q8VE73 1689 aa32.57■■■□□ 2.8
Ltb-201ENSMUST00000025262 Arhgap31A6X8Z5 1425 aa32.55■■■□□ 2.8
Ltb-201ENSMUST00000025262 Polr1aO35134 1717 aaKnown RBP32.49■■■□□ 2.79
Ltb-201ENSMUST00000025262 Naip2Q9QUK4 1447 aa32.49■■■□□ 2.79
Ltb-201ENSMUST00000025262 Arhgap35Q91YM2 1499 aa32.48■■■□□ 2.79
Ltb-201ENSMUST00000025262 Cux1P53564 1515 aa32.46■■■□□ 2.79
Ltb-201ENSMUST00000025262 Ccdc141E9Q8Q6 1531 aa32.44■■■□□ 2.78
Ltb-201ENSMUST00000025262 A2mQ6GQT1 1474 aa32.42■■■□□ 2.78
Ltb-201ENSMUST00000025262 Fbxo41Q6NS60 873 aa32.35■■■□□ 2.77
Ltb-201ENSMUST00000025262 Mroh2aD3Z750 1679 aa32.29■■■□□ 2.76
Ltb-201ENSMUST00000025262 Abca8bQ8K440 1620 aa32.27■■■□□ 2.76
Ltb-201ENSMUST00000025262 Gcc2Q8CHG3 1679 aa32.25■■■□□ 2.75
Ltb-201ENSMUST00000025262 Fyco1Q8VDC1 1437 aa32.24■■■□□ 2.75
Ltb-201ENSMUST00000025262 Fancd2Q80V62 1450 aa32.23■■■□□ 2.75
Ltb-201ENSMUST00000025262 Clip1Q922J3 1391 aa32.21■■■□□ 2.75
Ltb-201ENSMUST00000025262 Kiaa1210E9Q0C6 1637 aa32.21■■■□□ 2.75
Ltb-201ENSMUST00000025262 PtprmP28828 1452 aa32.21■■■□□ 2.75
Ltb-201ENSMUST00000025262 Synj2Q9D2G5 1434 aa32.13■■■□□ 2.73
Ltb-201ENSMUST00000025262 Mlh3A0A1Y7VMP7 1443 aa32.11■■■□□ 2.73
Ltb-201ENSMUST00000025262 BlmO88700 1416 aa32.11■■■□□ 2.73
Ltb-201ENSMUST00000025262 Qser1A2BIE1 1698 aa32.09■■■□□ 2.73
Ltb-201ENSMUST00000025262 Ncoa2Q61026 1462 aa32.09■■■□□ 2.73
Ltb-201ENSMUST00000025262 Neurl4Q5NCX5 1563 aa32.07■■■□□ 2.72
Ltb-201ENSMUST00000025262 Kif14L0N7N1 1674 aaKnown RBP32.05■■■□□ 2.72
Ltb-201ENSMUST00000025262 Rapgef6Q5NCJ1 1609 aa32.02■■■□□ 2.72
Ltb-201ENSMUST00000025262 Abca9Q8K449 1623 aa32.01■■■□□ 2.72
Ltb-201ENSMUST00000025262 Adamtsl3G3UXC7 1706 aa32.01■■■□□ 2.72
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms