RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Kif15Q6P9L6 1387 aa6.17□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Ccdc88bQ4QRL3 1481 aa6.17□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Cux1P53564 1515 aa6.17□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Fyco1Q8VDC1 1437 aa6.16□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Clstn2Q9ER65 966 aa6.16□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Phldb1Q6PDH0 1371 aaKnown RBP6.15□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Ankrd36D3Z4K0 1415 aa6.15□□□□□ -1.42
Prkdc-201ENSMUST00000023352 Os9Q8K2C7 672 aa6.15□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Irx3P81067 507 aa6.15□□□□□ -1.43
Prkdc-201ENSMUST00000023352 CntlnA2AM05 1397 aa6.15□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Hsp90aa1P07901 733 aaKnown RBP6.14□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Fam50aQ9WV03 339 aaKnown RBP6.13□□□□□ -1.43
Prkdc-201ENSMUST00000023352 DaxxO35613 739 aa6.13□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Il27Q8K3I6 234 aa6.13□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Carmil1Q6EDY6 1374 aa6.13□□□□□ -1.43
Prkdc-201ENSMUST00000023352 UacaQ8CGB3 1411 aa6.12□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Cecr2E9Q2Z1 1453 aa6.12□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Arhgap35Q91YM2 1499 aa6.12□□□□□ -1.43
Prkdc-201ENSMUST00000023352 BlmO88700 1416 aa6.12□□□□□ -1.43
Prkdc-201ENSMUST00000023352 AqrQ8CFQ3 1481 aaKnown RBP6.11□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Efcab5A0JP43 1406 aa6.11□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Shroom4Q1W617 1475 aa6.1□□□□□ -1.43
Prkdc-201ENSMUST00000023352 BicraF8VPZ9 1578 aa6.1□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Calr4Q3TQS0 420 aa6.1□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Dhx57Q6P5D3 1388 aaKnown RBP6.1□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Wdr43Q6ZQL4 677 aaKnown RBP6.09□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Zfp777B9EKF4 885 aa6.09□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Gm13697A2AK42 830 aa6.09□□□□□ -1.43
Prkdc-201ENSMUST00000023352 4933402E13RikQ9D4D2 429 aa6.09□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Lamc3Q9R0B6 1581 aa6.09□□□□□ -1.43
Prkdc-201ENSMUST00000023352 Sall2Q9QX96 1004 aa6.09□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Cc2d2aQ8CFW7 1633 aa6.08□□□□□ -1.44
Prkdc-201ENSMUST00000023352 CatipB9EKE5 520 aa6.07□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Fhad1A6PWD2 1420 aa6.07□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Cwc22Q8C5N3 908 aaKnown RBP6.07□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Slc24a1Q91WD8 1130 aa6.06□□□□□ -1.44
Prkdc-201ENSMUST00000023352 LrpprcQ6PB66 1392 aaKnown RBP6.06□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Htatsf1Q8BGC0 757 aa6.06□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Wdr62Q3U3T8 1523 aa6.05□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Rock2P70336 1388 aa6.05□□□□□ -1.44
Prkdc-201ENSMUST00000023352 TnnQ80Z71 1560 aa6.04□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Plekhg3Q4VAC9 1341 aa6.04□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Fam71e1A1L3C1 212 aa6.04□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Vps8Q0P5W1 1427 aa6.04□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Ubl4bQ9CQ84 188 aa6.03□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Tiam1Q60610 1591 aa6.03□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Mtus2Q3UHD3 1353 aa6.03□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Cux2P70298 1426 aa6.03□□□□□ -1.44
Prkdc-201ENSMUST00000023352 DroshaQ5HZJ0 1373 aaKnown RBP6.03□□□□□ -1.44
Prkdc-201ENSMUST00000023352 Arhgef5E9Q7D5 1581 aa6.02□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Grin2bQ01097 1482 aa6.02□□□□□ -1.45
Prkdc-201ENSMUST00000023352 AU015836B2RUM3 263 aa6.01□□□□□ -1.45
Prkdc-201ENSMUST00000023352 TchhA0A0B4J1F9 1599 aa6.01□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Mroh2bQ7M6Y6 1581 aa6.01□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Camsap2Q8C1B1 1461 aa6.01□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Plekhh2Q8C115 1491 aa6.01□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Camsap1A2AHC3 1581 aa6.01□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Ncoa2Q61026 1462 aa6□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Kif21aQ9QXL2 1672 aa6□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Adam1bQ8R534 806 aa5.99□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Kif27Q7M6Z4 1394 aa5.99□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Ppm1gQ61074 542 aa5.99□□□□□ -1.45
Prkdc-201ENSMUST00000023352 EprsQ8CGC7 1512 aaKnown RBP5.99□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Mbd3Q9Z2D8 285 aaKnown RBP5.98□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Peg3Q3URU2 1571 aa5.98□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Pknox2Q8BG99 474 aa5.98□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Nlrp6Q91WS2 869 aa5.97□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Ccnb3Q810T2 1396 aa5.97□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Ppp4r2Q0VGB7 417 aa5.97□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Trim44Q9QXA7 346 aa5.97□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Frmpd1A2AKB4 1549 aa5.97□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Chmp4bQ9D8B3 224 aaKnown RBP5.96□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Ift140E9PY46 1464 aa5.96□□□□□ -1.45
Prkdc-201ENSMUST00000023352 Erich3F6QRE9 1637 aa5.96□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Znf316Q6PGE4 1016 aa5.96□□□□□ -1.46
Prkdc-201ENSMUST00000023352 SynmQ70IV5 1561 aa5.96□□□□□ -1.46
Prkdc-201ENSMUST00000023352 PogzQ8BZH4 1409 aaKnown RBP5.96□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Stard8Q8K031 1019 aa5.96□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Rfx7F8VPJ6 1459 aa5.95□□□□□ -1.46
Prkdc-201ENSMUST00000023352 AampJ3QN89 436 aa5.95□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Rsph4aQ8BYM7 716 aa5.95□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Naip1Q9QWK5 1403 aa5.95□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Tnnt2P50752 301 aa5.94□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Duox2A2AQ99 1517 aa5.94□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Dhx29Q6PGC1 1365 aaKnown RBP5.94□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Gtf3c3Q3TMP1 882 aa5.93□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Tcerg1Q8CGF7 1100 aaKnown RBP5.93□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Ncapd3Q6ZQK0 1506 aa5.92□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Pdcl3Q8BVF2 240 aa5.92□□□□□ -1.46
Prkdc-201ENSMUST00000023352 BccipQ9CWI3 316 aa5.92□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Ap3b1Q9Z1T1 1105 aa5.92□□□□□ -1.46
Prkdc-201ENSMUST00000023352 WrnO09053 1401 aa5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Gm13695A2AK44 830 aa5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Pbrm1Q8BSQ9 1634 aaKnown RBP5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 CanxP35564 591 aaKnown RBP5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Lmod2Q3UHZ5 550 aa5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Aebp1Q640N1 1128 aa5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 PtmsQ9D0J8 101 aaKnown RBP5.91□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Eif4g1Q6NZJ6 1600 aaKnown RBP5.9□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Supt16hQ920B9 1047 aa5.9□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms