RNA–Protein interactions for RNA: ENSMUST00000021056.7

Scn4a-201, Transcript of Sodium channel protein type 4 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn4a, Length 6,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4a-201ENSMUST00000021056 PtmaP26350 111 aa12.65□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Ppp4r2Q0VGB7 417 aa12.65□□□□□ -0.38
Scn4a-201ENSMUST00000021056 Rb1cc1Q9ESK9 1588 aa12.65□□□□□ -0.38
Scn4a-201ENSMUST00000021056 BccipQ9CWI3 316 aa12.57□□□□□ -0.4
Scn4a-201ENSMUST00000021056 Arid4bA2CG63 1314 aaKnown RBP12.57□□□□□ -0.4
Scn4a-201ENSMUST00000021056 Fgd1P52734 960 aa12.55□□□□□ -0.4
Scn4a-201ENSMUST00000021056 Rtn4Q99P72 1162 aaKnown RBP12.54□□□□□ -0.4
Scn4a-201ENSMUST00000021056 ClspnQ80YR7 1315 aa12.54□□□□□ -0.4
Scn4a-201ENSMUST00000021056 Rad21Q61550 635 aaKnown RBP12.53□□□□□ -0.4
Scn4a-201ENSMUST00000021056 Mier1Q5UAK0 511 aa12.53□□□□□ -0.4
Scn4a-201ENSMUST00000021056 Ppp1r18Q8BQ30 594 aa12.53□□□□□ -0.4
Scn4a-201ENSMUST00000021056 NgefQ8CHT1 710 aa12.52□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Tnnt2P50752 301 aa12.51□□□□□ -0.41
Scn4a-201ENSMUST00000021056 MlecQ6ZQI3 291 aaKnown RBP12.5□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Podxl2Q8CAE9 603 aa12.5□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Calr4Q3TQS0 420 aa12.5□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Prm3Q62100 101 aa12.49□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Sycp2Q9CUU3 1500 aa12.49□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Slc4a1apE9PX68 744 aa12.49□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Ccdc9Q8VC31 543 aaKnown RBP12.48□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Hsp90ab1P11499 724 aaKnown RBP12.48□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Mak16Q8BGS0 296 aaKnown RBP12.48□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Clstn1Q9EPL2 979 aa12.47□□□□□ -0.41
Scn4a-201ENSMUST00000021056 Clstn2Q9ER65 966 aa12.47□□□□□ -0.41
Scn4a-201ENSMUST00000021056 PnnO35691 725 aaKnown RBP12.45□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Trim26Q99PN3 545 aa12.45□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Plcb2A3KGF7 1181 aa12.45□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Ppm1fQ8CGA0 452 aa12.44□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Q8BT18 775 aa12.44□□□□□ -0.42
Scn4a-201ENSMUST00000021056 CanxP35564 591 aaKnown RBP12.42□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Chic2Q9D9G3 165 aa12.42□□□□□ -0.42
Scn4a-201ENSMUST00000021056 IqubQ8CDK3 788 aa12.42□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Aplp2Q06335 707 aa12.42□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Adam1bQ8R534 806 aa12.4□□□□□ -0.42
Scn4a-201ENSMUST00000021056 Wdr43Q6ZQL4 677 aaKnown RBP12.39□□□□□ -0.43
Scn4a-201ENSMUST00000021056 Trim30dE9PWL0 497 aa12.37□□□□□ -0.43
Scn4a-201ENSMUST00000021056 Noc3lQ8VI84 807 aaKnown RBP12.35□□□□□ -0.43
Scn4a-201ENSMUST00000021056 Arhgap27A2AB59 869 aa12.33□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Ubap1lG3UW59 384 aa12.33□□□□□ -0.44
Scn4a-201ENSMUST00000021056 SetQ9EQU5 289 aaKnown RBP12.33□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Ecm2Q5FW85 670 aa12.32□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Exosc9Q9JHI7 438 aaKnown RBP12.32□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Spryd3E9Q9B3 442 aa12.31□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Eid3Q3V124 375 aa12.31□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Brd4Q9ESU6 1400 aaKnown RBP12.3□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Anks4bQ8K3X6 423 aa12.3□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Grwd1Q810D6 446 aaKnown RBP12.3□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Clip1Q922J3 1391 aa12.3□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Srpk2O54781 681 aaKnown RBP12.29□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Casc1Q6TDU8 730 aa12.29□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Kdm2aP59997 1161 aa12.28□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Eif4g2Q62448 906 aaKnown RBP12.28□□□□□ -0.44
Scn4a-201ENSMUST00000021056 Calcoco2A2A6M5 331 aa12.27□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Pes1Q9EQ61 584 aaKnown RBP12.26□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Smarca2Q6DIC0 1577 aa12.25□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Htatsf1Q8BGC0 757 aa12.25□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Erich6bQ9D4S6 220 aa12.24□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Stk24Q99KH8 431 aa12.23□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Ercc6F8VPZ5 1481 aa12.21□□□□□ -0.45
Scn4a-201ENSMUST00000021056 Taok2Q6ZQ29 1240 aa12.21□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Gm20521D3Z5F7 333 aa12.2□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Ccer2J3QPU5 274 aa12.2□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Gm6268A2A3U9 297 aa12.2□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Stag3O70576 1240 aa12.2□□□□□ -0.46
Scn4a-201ENSMUST00000021056 MsnP26041 577 aaKnown RBP12.19□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Fam71e1A1L3C1 212 aa12.18□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Ccdc27Q3V036 639 aa12.18□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Rgl3Q3UYI5 709 aa12.17□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Mroh3A0A1D5RM54 893 aa12.16□□□□□ -0.46
Scn4a-201ENSMUST00000021056 HdgfP51859 237 aaKnown RBP12.16□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Anapc15P60007 132 aa12.16□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Pcmtd1P59913 357 aa12.15□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Rrp7aQ9D1C9 280 aaKnown RBP12.15□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Mrs2Q5NCE8 434 aa12.15□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Apbb1Q9QXJ1 710 aa12.15□□□□□ -0.46
Scn4a-201ENSMUST00000021056 Iqcf3Q9D498 203 aa12.15□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Ftsj3Q9DBE9 838 aaKnown RBP12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Mapk8ip3Q9ESN9 1337 aa12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 1700019A02RikA0A087WPV9 146 aa12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Sall2Q9QX96 1004 aa12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Bcl11aQ9QYE3 773 aa12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 BlmO88700 1416 aa12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Dnttip2Q8R2M2 758 aaKnown RBP12.14□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Isy1Q69ZQ2 285 aaKnown RBP12.13□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Sh3bp5Q9Z131 463 aa12.13□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Bcl11bQ99PV8 884 aa12.13□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Irx3P81067 507 aa12.12□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Ciz1Q8VEH2 845 aa12.12□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Chrna2Q91X60 512 aa12.12□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Armcx1Q9CX83 456 aa12.12□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Zfp777B9EKF4 885 aa12.11□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Gm973E9Q295 1059 aa12.11□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Arid3cA6PWV5 409 aa12.1□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Dbr1Q923B1 550 aa12.1□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Kiaa0754Q69ZZ9 979 aa12.1□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Psme1P97371 249 aa12.09□□□□□ -0.47
Scn4a-201ENSMUST00000021056 Kif15Q6P9L6 1387 aa12.09□□□□□ -0.47
Scn4a-201ENSMUST00000021056 AU015836B2RUM3 263 aa12.08□□□□□ -0.48
Scn4a-201ENSMUST00000021056 Hsp90b1P08113 802 aaKnown RBP12.08□□□□□ -0.48
Scn4a-201ENSMUST00000021056 Sox12Q04890 314 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms