RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ythdc2B2RR83 1445 aaKnown RBP29.21■■■□□ 2.27
Trim54-201ENSMUST00000013771 Gpatch8A2A6A1 1505 aa29.21■■■□□ 2.27
Trim54-201ENSMUST00000013771 Top2aQ01320 1528 aaKnown RBP29.21■■■□□ 2.27
Trim54-201ENSMUST00000013771 Ccdc88bQ4QRL3 1481 aa29.2■■■□□ 2.26
Trim54-201ENSMUST00000013771 CadpsQ80TJ1 1355 aa29.19■■■□□ 2.26
Trim54-201ENSMUST00000013771 SynmQ70IV5 1561 aa29.18■■■□□ 2.26
Trim54-201ENSMUST00000013771 Shroom4Q1W617 1475 aa29.16■■■□□ 2.26
Trim54-201ENSMUST00000013771 Chd1P40201 1711 aa29.14■■■□□ 2.26
Trim54-201ENSMUST00000013771 Pprc1Q6NZN1 1644 aa29.14■■■□□ 2.26
Trim54-201ENSMUST00000013771 Rapgef2Q8CHG7 1496 aa29.13■■■□□ 2.25
Trim54-201ENSMUST00000013771 Soga1E1U8D0 1418 aa29.08■■■□□ 2.25
Trim54-201ENSMUST00000013771 Dnmt1P13864 1620 aaKnown RBP29.06■■■□□ 2.24
Trim54-201ENSMUST00000013771 Zeb1Q64318 1117 aa29.05■■■□□ 2.24
Trim54-201ENSMUST00000013771 Neo1P97798 1493 aa29■■■□□ 2.23
Trim54-201ENSMUST00000013771 Arhgap27A2AB59 869 aa28.99■■■□□ 2.23
Trim54-201ENSMUST00000013771 Setbp1Q9Z180 1582 aa28.97■■■□□ 2.23
Trim54-201ENSMUST00000013771 Abca16E9PWJ7 1678 aa28.96■■■□□ 2.23
Trim54-201ENSMUST00000013771 TchhA0A0B4J1F9 1599 aa28.95■■■□□ 2.23
Trim54-201ENSMUST00000013771 Abcc2Q8VI47 1543 aa28.95■■■□□ 2.22
Trim54-201ENSMUST00000013771 BC005561E9Q5E2 1589 aa28.94■■■□□ 2.22
Trim54-201ENSMUST00000013771 Map3k4O08648 1597 aa28.94■■■□□ 2.22
Trim54-201ENSMUST00000013771 Gm14025A2AP89 1413 aa28.93■■■□□ 2.22
Trim54-201ENSMUST00000013771 Chic1Q8CBW7 227 aa28.92■■■□□ 2.22
Trim54-201ENSMUST00000013771 WizO88286 1684 aaKnown RBP28.9■■■□□ 2.22
Trim54-201ENSMUST00000013771 Ppp1r18Q8BQ30 594 aa28.89■■■□□ 2.22
Trim54-201ENSMUST00000013771 PxdnQ3UQ28 1475 aa28.89■■■□□ 2.21
Trim54-201ENSMUST00000013771 Adamts12Q811B3 1600 aa28.84■■■□□ 2.21
Trim54-201ENSMUST00000013771 Ak9G3UYQ4 1894 aa28.83■■■□□ 2.21
Trim54-201ENSMUST00000013771 AI481877A2ALV5 1481 aa28.83■■■□□ 2.21
Trim54-201ENSMUST00000013771 EprsQ8CGC7 1512 aaKnown RBP28.82■■■□□ 2.2
Trim54-201ENSMUST00000013771 Eif4g1Q6NZJ6 1600 aaKnown RBP28.74■■■□□ 2.19
Trim54-201ENSMUST00000013771 Arhgef12Q8R4H2 1543 aaKnown RBP28.74■■■□□ 2.19
Trim54-201ENSMUST00000013771 Mroh2bQ7M6Y6 1581 aa28.73■■■□□ 2.19
Trim54-201ENSMUST00000013771 Ifnlr1Q8CGK5 535 aa28.73■■■□□ 2.19
Trim54-201ENSMUST00000013771 Slx4Q6P1D7 1565 aa28.72■■■□□ 2.19
Trim54-201ENSMUST00000013771 Npm2Q80W85 207 aa28.68■■■□□ 2.18
Trim54-201ENSMUST00000013771 Rpap1Q80TE0 1409 aa28.64■■■□□ 2.17
Trim54-201ENSMUST00000013771 Jph4Q80WT0 628 aa28.63■■■□□ 2.17
Trim54-201ENSMUST00000013771 Plekhg3Q4VAC9 1341 aa28.58■■■□□ 2.17
Trim54-201ENSMUST00000013771 Clasp1Q80TV8 1535 aaKnown RBP28.57■■■□□ 2.16
Trim54-201ENSMUST00000013771 Carmil1Q6EDY6 1374 aa28.56■■■□□ 2.16
Trim54-201ENSMUST00000013771 Gm7298A0A0N4SVU1 1476 aa28.55■■■□□ 2.16
Trim54-201ENSMUST00000013771 Fkbp15Q6P9Q6 1216 aaKnown RBP28.53■■■□□ 2.16
Trim54-201ENSMUST00000013771 AdgbG3UZ78 1657 aa28.53■■■□□ 2.16
Trim54-201ENSMUST00000013771 Ttc37F8VPK0 1563 aa28.51■■■□□ 2.15
Trim54-201ENSMUST00000013771 Map3k1P53349 1493 aa28.48■■■□□ 2.15
Trim54-201ENSMUST00000013771 Mapkbp1Q6NS57 1503 aa28.47■■■□□ 2.15
Trim54-201ENSMUST00000013771 Arid3cA6PWV5 409 aa28.46■■■□□ 2.15
Trim54-201ENSMUST00000013771 Abca5Q8K448 1642 aa28.43■■■□□ 2.14
Trim54-201ENSMUST00000013771 Igf1rQ60751 1373 aa28.42■■■□□ 2.14
Trim54-201ENSMUST00000013771 Lrrc9Q8CDN9 1456 aa28.39■■■□□ 2.14
Trim54-201ENSMUST00000013771 Polr1aO35134 1717 aaKnown RBP28.39■■■□□ 2.14
Trim54-201ENSMUST00000013771 WrnO09053 1401 aa28.39■■■□□ 2.13
Trim54-201ENSMUST00000013771 Depdc5P61460 1591 aa28.39■■■□□ 2.13
Trim54-201ENSMUST00000013771 Arhgef11Q68FM7 1552 aa28.39■■■□□ 2.13
Trim54-201ENSMUST00000013771 Rrbp1Q99PL5 1605 aaKnown RBP28.38■■■□□ 2.13
Trim54-201ENSMUST00000013771 Kdm5bQ80Y84 1544 aa28.35■■■□□ 2.13
Trim54-201ENSMUST00000013771 Arhgap35Q91YM2 1499 aa28.33■■■□□ 2.13
Trim54-201ENSMUST00000013771 Zfyve16Q80U44 1528 aa28.31■■■□□ 2.12
Trim54-201ENSMUST00000013771 Znf608Q56A10 1511 aa28.3■■■□□ 2.12
Trim54-201ENSMUST00000013771 Wdr7Q920I9 1489 aa28.27■■■□□ 2.12
Trim54-201ENSMUST00000013771 Plppr3Q7TPB0 716 aa28.23■■■□□ 2.11
Trim54-201ENSMUST00000013771 Fndc1E9Q043 1732 aa28.23■■■□□ 2.11
Trim54-201ENSMUST00000013771 Alpk3Q924C5 1678 aa28.22■■■□□ 2.11
Trim54-201ENSMUST00000013771 Cux1P53564 1515 aa28.19■■■□□ 2.1
Trim54-201ENSMUST00000013771 Clip1Q922J3 1391 aa28.16■■■□□ 2.1
Trim54-201ENSMUST00000013771 NhsB1AV60 1647 aa28.15■■■□□ 2.1
Trim54-201ENSMUST00000013771 Arhgap31A6X8Z5 1425 aa28.14■■■□□ 2.1
Trim54-201ENSMUST00000013771 Gab3Q8BSM5 595 aa28.14■■■□□ 2.1
Trim54-201ENSMUST00000013771 Cul7Q8VE73 1689 aa28.12■■■□□ 2.09
Trim54-201ENSMUST00000013771 Fyco1Q8VDC1 1437 aa28.11■■■□□ 2.09
Trim54-201ENSMUST00000013771 Ccdc141E9Q8Q6 1531 aa28.1■■■□□ 2.09
Trim54-201ENSMUST00000013771 Atp10dQ8K2X1 1416 aa28.09■■■□□ 2.09
Trim54-201ENSMUST00000013771 AglF8VPN4 1532 aa28.06■■■□□ 2.08
Trim54-201ENSMUST00000013771 Dnajc5gQ8C632 165 aa28.04■■■□□ 2.08
Trim54-201ENSMUST00000013771 Cep162Q6ZQ06 1403 aa27.96■■■□□ 2.07
Trim54-201ENSMUST00000013771 MlecQ6ZQI3 291 aaKnown RBP27.96■■■□□ 2.07
Trim54-201ENSMUST00000013771 Myt1lP97500 1187 aa27.95■■■□□ 2.07
Trim54-201ENSMUST00000013771 Gcc2Q8CHG3 1679 aa27.93■■■□□ 2.06
Trim54-201ENSMUST00000013771 Mroh2aD3Z750 1679 aa27.92■■■□□ 2.06
Trim54-201ENSMUST00000013771 Rnf17Q99MV7 1640 aa27.9■■■□□ 2.06
Trim54-201ENSMUST00000013771 Ncoa2Q61026 1462 aa27.87■■■□□ 2.05
Trim54-201ENSMUST00000013771 Kiaa1210E9Q0C6 1637 aa27.87■■■□□ 2.05
Trim54-201ENSMUST00000013771 Fancd2Q80V62 1450 aa27.87■■■□□ 2.05
Trim54-201ENSMUST00000013771 Abca8bQ8K440 1620 aa27.86■■■□□ 2.05
Trim54-201ENSMUST00000013771 A2mQ6GQT1 1474 aa27.84■■■□□ 2.05
Trim54-201ENSMUST00000013771 Rapgef6Q5NCJ1 1609 aa27.84■■■□□ 2.05
Trim54-201ENSMUST00000013771 BlmO88700 1416 aa27.81■■■□□ 2.04
Trim54-201ENSMUST00000013771 Kdm6bQ5NCY0 1641 aa27.79■■■□□ 2.04
Trim54-201ENSMUST00000013771 Ankrd26Q811D2 1581 aa27.78■■■□□ 2.04
Trim54-201ENSMUST00000013771 Kif27Q7M6Z4 1394 aa27.77■■■□□ 2.04
Trim54-201ENSMUST00000013771 Cyb5rlB1AS42 316 aa27.76■■■□□ 2.04
Trim54-201ENSMUST00000013771 Aebp1Q640N1 1128 aa27.76■■■□□ 2.04
Trim54-201ENSMUST00000013771 Arap1Q4LDD4 1452 aa27.74■■■□□ 2.03
Trim54-201ENSMUST00000013771 Magi1Q6RHR9 1471 aa27.73■■■□□ 2.03
Trim54-201ENSMUST00000013771 Naip2Q9QUK4 1447 aa27.69■■■□□ 2.02
Trim54-201ENSMUST00000013771 Brwd3A2AHJ4 1799 aa27.69■■■□□ 2.02
Trim54-201ENSMUST00000013771 Mlh3A0A1Y7VMP7 1443 aa27.65■■■□□ 2.02
Trim54-201ENSMUST00000013771 Prex2Q3LAC4 1598 aa27.65■■■□□ 2.02
Trim54-201ENSMUST00000013771 HrcG5E8J6 738 aa27.64■■■□□ 2.02
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms