RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Ccdc27Q3V036 639 aa23.78■■□□□ 1.4
Sptbn4-201ENSMUST00000011895 CanxP35564 591 aaKnown RBP23.77■■□□□ 1.4
Sptbn4-201ENSMUST00000011895 Eid3Q3V124 375 aa23.75■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Abcc8B2RUS7 1588 aa23.75■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Zfp777B9EKF4 885 aa23.74■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Trim30dE9PWL0 497 aa23.73■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Ppm1gQ61074 542 aa23.72■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Mrs2Q5NCE8 434 aa23.72■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Sall2Q9QX96 1004 aa23.71■■□□□ 1.39
Sptbn4-201ENSMUST00000011895 Map7O88735 730 aa23.7■■□□□ 1.38
Sptbn4-201ENSMUST00000011895 PnnO35691 725 aaKnown RBP23.67■■□□□ 1.38
Sptbn4-201ENSMUST00000011895 Mapk8ip2Q9ERE9 830 aa23.67■■□□□ 1.38
Sptbn4-201ENSMUST00000011895 Rad21Q61550 635 aaKnown RBP23.66■■□□□ 1.38
Sptbn4-201ENSMUST00000011895 Ifnlr1Q8CGK5 535 aa23.63■■□□□ 1.37
Sptbn4-201ENSMUST00000011895 BlmO88700 1416 aa23.62■■□□□ 1.37
Sptbn4-201ENSMUST00000011895 PtmsQ9D0J8 101 aaKnown RBP23.59■■□□□ 1.37
Sptbn4-201ENSMUST00000011895 Calcoco2A2A6M5 331 aa23.59■■□□□ 1.37
Sptbn4-201ENSMUST00000011895 Mbd3Q9Z2D8 285 aaKnown RBP23.58■■□□□ 1.37
Sptbn4-201ENSMUST00000011895 Cwc22Q8C5N3 908 aaKnown RBP23.55■■□□□ 1.36
Sptbn4-201ENSMUST00000011895 Gm973E9Q295 1059 aa23.54■■□□□ 1.36
Sptbn4-201ENSMUST00000011895 Vsig10D3YX43 558 aa23.53■■□□□ 1.36
Sptbn4-201ENSMUST00000011895 Casc1Q6TDU8 730 aa23.52■■□□□ 1.36
Sptbn4-201ENSMUST00000011895 Tnnt2P50752 301 aa23.51■■□□□ 1.35
Sptbn4-201ENSMUST00000011895 Gm38655A0A286YDK6 273 aa23.5■■□□□ 1.35
Sptbn4-201ENSMUST00000011895 Plcb2A3KGF7 1181 aa23.48■■□□□ 1.35
Sptbn4-201ENSMUST00000011895 Rangap1P46061 589 aaKnown RBP23.48■■□□□ 1.35
Sptbn4-201ENSMUST00000011895 IqubQ8CDK3 788 aa23.48■■□□□ 1.35
Sptbn4-201ENSMUST00000011895 Ofd1Q80Z25 1017 aa23.46■■□□□ 1.35
Sptbn4-201ENSMUST00000011895 Iqcf3Q9D498 203 aa23.41■■□□□ 1.34
Sptbn4-201ENSMUST00000011895 KnstrnQ9D9Z1 312 aaKnown RBP23.41■■□□□ 1.34
Sptbn4-201ENSMUST00000011895 MccE9PWI3 1003 aa23.41■■□□□ 1.34
Sptbn4-201ENSMUST00000011895 AU015836B2RUM3 263 aa23.4■■□□□ 1.34
Sptbn4-201ENSMUST00000011895 Safb2Q80YR5 991 aaKnown RBP23.39■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 Wwc2Q6NXJ0 1187 aa23.39■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 Mapk8ip3Q9ESN9 1337 aa23.37■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 Irx3P81067 507 aa23.35■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 NudcO35685 332 aaKnown RBP23.35■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 Setd5Q5XJV7 1441 aa23.35■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 Pde3bQ61409 1100 aa23.35■■□□□ 1.33
Sptbn4-201ENSMUST00000011895 Mia2Q91ZV0 1396 aa23.32■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Pes1Q9EQ61 584 aaKnown RBP23.31■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Fkbp15Q6P9Q6 1216 aaKnown RBP23.29■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Eea1Q8BL66 1411 aa23.29■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Mak16Q8BGS0 296 aaKnown RBP23.29■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 SetQ9EQU5 289 aaKnown RBP23.28■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Ccdc18Q640L5 1455 aa23.28■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Chic2Q9D9G3 165 aa23.28■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Trim26Q99PN3 545 aa23.28■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Exosc9Q9JHI7 438 aaKnown RBP23.27■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 Fam71e1A1L3C1 212 aa23.27■■□□□ 1.32
Sptbn4-201ENSMUST00000011895 MsnP26041 577 aaKnown RBP23.23■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 HnrnpuQ8VEK3 800 aaKnown RBP23.22■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 4933402E13RikQ9D4D2 429 aa23.22■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 Eif4g2Q62448 906 aaKnown RBP23.22■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 Gm6268A2A3U9 297 aa23.21■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 Rgl3Q3UYI5 709 aa23.21■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 Srpk2O54781 681 aaKnown RBP23.21■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 P3h3Q8CG70 732 aa23.21■■□□□ 1.31
Sptbn4-201ENSMUST00000011895 Cald1E9QA15 768 aaKnown RBP23.19■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Card11Q8CIS0 1159 aa23.17■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Baz1aO88379 1555 aa23.17■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Arid4bA2CG63 1314 aaKnown RBP23.16■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Dnai2A2AC93 623 aa23.16■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Znf316Q6PGE4 1016 aa23.16■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Ubl4bQ9CQ84 188 aa23.15■■□□□ 1.3
Sptbn4-201ENSMUST00000011895 Fhad1A6PWD2 1420 aa23.14■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Tpm3-rs7D3Z2H9 248 aa23.13■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 RdxP26043 583 aaKnown RBP23.13■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Mtus2Q3UHD3 1353 aa23.12■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Erich6bQ9D4S6 220 aa23.11■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Mroh3A0A1D5RM54 893 aa23.11■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Bcl11aQ9QYE3 773 aa23.1■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Rwdd1Q9CQK7 243 aa23.1■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Plppr3Q7TPB0 716 aa23.1■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Tcerg1Q8CGF7 1100 aaKnown RBP23.08■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 Map7d2A2AG50 781 aa23.08■■□□□ 1.29
Sptbn4-201ENSMUST00000011895 1700123L14RikQ3V2K7 440 aa23.06■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Hsp90b1P08113 802 aaKnown RBP23.05■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Rsf1E9PWW9 1441 aaKnown RBP23.05■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Sh3bp5Q9Z131 463 aa23.04■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 R3hcc1Q8BSI6 488 aa23.03■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Smarce1O54941 411 aaKnown RBP23.03■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Dnttip2Q8R2M2 758 aaKnown RBP23.03■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Golga3P55937 1487 aa23.02■■□□□ 1.28
Sptbn4-201ENSMUST00000011895 Ercc6F8VPZ5 1481 aa23.01■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 Rrp12Q6P5B0 1295 aaKnown RBP23.01■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 NacadQ5SWP3 1504 aa23.01■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 Sart3Q9JLI8 962 aaKnown RBP23■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 Gm20521D3Z5F7 333 aa23■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 Dnai1Q8C0M8 701 aa23■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 Kdm2aP59997 1161 aa22.96■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 EspnQ9ET47 871 aa22.95■■□□□ 1.27
Sptbn4-201ENSMUST00000011895 Anapc15P60007 132 aa22.93■■□□□ 1.26
Sptbn4-201ENSMUST00000011895 Ddrgk1Q80WW9 315 aa22.93■■□□□ 1.26
Sptbn4-201ENSMUST00000011895 Stag3O70576 1240 aa22.91■■□□□ 1.26
Sptbn4-201ENSMUST00000011895 Atp6v1dP57746 247 aa22.89■■□□□ 1.26
Sptbn4-201ENSMUST00000011895 Pcmtd1P59913 357 aa22.89■■□□□ 1.25
Sptbn4-201ENSMUST00000011895 Apbb1Q9QXJ1 710 aa22.88■■□□□ 1.25
Sptbn4-201ENSMUST00000011895 Irx6Q9ER75 438 aa22.88■■□□□ 1.25
Sptbn4-201ENSMUST00000011895 Chmp5Q9D7S9 219 aa22.88■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms