RNA–Protein interactions for RNA: ENSMUST00000011895.13

Sptbn4-201, Transcript of Spectrin beta chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Sptbn4, Length 8,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-201ENSMUST00000011895 Rhox8Q6VSS7 320 aa30.99■■■□□ 2.55
Sptbn4-201ENSMUST00000011895 Rpgrip1Q9EPQ2 1331 aa30.19■■■□□ 2.42
Sptbn4-201ENSMUST00000011895 Cngb1E1AZ71 1325 aa29.64■■■□□ 2.34
Sptbn4-201ENSMUST00000011895 Las1lA2BE28 776 aaKnown RBP29.32■■■□□ 2.28
Sptbn4-201ENSMUST00000011895 Pelp1Q9DBD5 1123 aaKnown RBP29.18■■■□□ 2.26
Sptbn4-201ENSMUST00000011895 Rtl1Q7M732 1744 aa28.08■■■□□ 2.09
Sptbn4-201ENSMUST00000011895 Wdr66E9Q743 1299 aa27.91■■■□□ 2.06
Sptbn4-201ENSMUST00000011895 Amer1Q7TS75 1132 aa27.75■■■□□ 2.03
Sptbn4-201ENSMUST00000011895 Ube2uB1AUC4 352 aa27.64■■■□□ 2.02
Sptbn4-201ENSMUST00000011895 Ehmt2Q9Z148 1263 aaKnown RBP27.62■■■□□ 2.01
Sptbn4-201ENSMUST00000011895 Stra8P70278 393 aa27.58■■■□□ 2.01
Sptbn4-201ENSMUST00000011895 Esf1Q3V1V3 845 aaKnown RBP27.49■■□□□ 1.99
Sptbn4-201ENSMUST00000011895 CenpbP27790 599 aa27.49■■□□□ 1.99
Sptbn4-201ENSMUST00000011895 Ccdc180J3QNE4 1664 aa27.45■■□□□ 1.99
Sptbn4-201ENSMUST00000011895 Zeb1Q64318 1117 aa27.4■■□□□ 1.98
Sptbn4-201ENSMUST00000011895 4930567H17RikQ3V0K5 233 aa27.36■■□□□ 1.97
Sptbn4-201ENSMUST00000011895 Trim41Q5NCC3 630 aa27.27■■□□□ 1.96
Sptbn4-201ENSMUST00000011895 Myt1Q8CFC2 1127 aa27.13■■□□□ 1.93
Sptbn4-201ENSMUST00000011895 Ccdc136Q3TVA9 1136 aa27.11■■□□□ 1.93
Sptbn4-201ENSMUST00000011895 Npm2Q80W85 207 aa27.1■■□□□ 1.93
Sptbn4-201ENSMUST00000011895 NefmP08553 848 aa27.08■■□□□ 1.93
Sptbn4-201ENSMUST00000011895 Acin1Q9JIX8 1338 aaKnown RBP26.81■■□□□ 1.88
Sptbn4-201ENSMUST00000011895 NischQ80TM9 1593 aa26.81■■□□□ 1.88
Sptbn4-201ENSMUST00000011895 Gab3Q8BSM5 595 aa26.7■■□□□ 1.86
Sptbn4-201ENSMUST00000011895 Myt1lP97500 1187 aa26.6■■□□□ 1.85
Sptbn4-201ENSMUST00000011895 Tnnt3Q9QZ47 272 aa26.52■■□□□ 1.84
Sptbn4-201ENSMUST00000011895 Anp32bQ9EST5 272 aaKnown RBP26.47■■□□□ 1.83
Sptbn4-201ENSMUST00000011895 NeflP08551 543 aa26.41■■□□□ 1.82
Sptbn4-201ENSMUST00000011895 Rtl5Q5DTT4 599 aa26.32■■□□□ 1.8
Sptbn4-201ENSMUST00000011895 Cdk11bP24788 784 aaKnown RBP26.29■■□□□ 1.8
Sptbn4-201ENSMUST00000011895 4933416C03RikQ3V063 378 aa26.26■■□□□ 1.79
Sptbn4-201ENSMUST00000011895 Ttbk1Q6PCN3 1308 aa26.25■■□□□ 1.79
Sptbn4-201ENSMUST00000011895 NrdcQ8BHG1 1161 aa26.2■■□□□ 1.78
Sptbn4-201ENSMUST00000011895 Slc24a1Q91WD8 1130 aa26.19■■□□□ 1.78
Sptbn4-201ENSMUST00000011895 UbtfP25976 765 aaKnown RBP26.19■■□□□ 1.78
Sptbn4-201ENSMUST00000011895 HrcG5E8J6 738 aa25.95■■□□□ 1.74
Sptbn4-201ENSMUST00000011895 Nop58Q6DFW4 536 aaKnown RBP25.81■■□□□ 1.72
Sptbn4-201ENSMUST00000011895 NclP09405 707 aaKnown RBP25.76■■□□□ 1.71
Sptbn4-201ENSMUST00000011895 Pcgf6Q99NA9 353 aa25.64■■□□□ 1.7
Sptbn4-201ENSMUST00000011895 Os9Q8K2C7 672 aa25.51■■□□□ 1.67
Sptbn4-201ENSMUST00000011895 Fam50aQ9WV03 339 aaKnown RBP25.5■■□□□ 1.67
Sptbn4-201ENSMUST00000011895 DiexfQ8BTT6 772 aaKnown RBP25.49■■□□□ 1.67
Sptbn4-201ENSMUST00000011895 TonslQ6NZL6 1363 aa25.48■■□□□ 1.67
Sptbn4-201ENSMUST00000011895 Eif5bQ05D44 1216 aaKnown RBP25.44■■□□□ 1.66
Sptbn4-201ENSMUST00000011895 Neurod1Q60867 357 aa25.42■■□□□ 1.66
Sptbn4-201ENSMUST00000011895 Anp32aO35381 247 aa25.26■■□□□ 1.63
Sptbn4-201ENSMUST00000011895 Hdac5Q9Z2V6 1113 aa25.21■■□□□ 1.63
Sptbn4-201ENSMUST00000011895 Il27Q8K3I6 234 aa25.18■■□□□ 1.62
Sptbn4-201ENSMUST00000011895 Zcchc6Q5BLK4 1491 aaKnown RBP25.11■■□□□ 1.61
Sptbn4-201ENSMUST00000011895 DaxxO35613 739 aa25.08■■□□□ 1.61
Sptbn4-201ENSMUST00000011895 Ythdc1E9Q5K9 736 aaKnown RBP25.08■■□□□ 1.61
Sptbn4-201ENSMUST00000011895 ClspnQ80YR7 1315 aa25.07■■□□□ 1.6
Sptbn4-201ENSMUST00000011895 Ap3b1Q9Z1T1 1105 aa24.92■■□□□ 1.58
Sptbn4-201ENSMUST00000011895 Supt5hO55201 1082 aaKnown RBP24.9■■□□□ 1.58
Sptbn4-201ENSMUST00000011895 Ccdc9Q8VC31 543 aaKnown RBP24.86■■□□□ 1.57
Sptbn4-201ENSMUST00000011895 Nlrp6Q91WS2 869 aa24.79■■□□□ 1.56
Sptbn4-201ENSMUST00000011895 Upf2A2AT37 1269 aaKnown RBP24.75■■□□□ 1.55
Sptbn4-201ENSMUST00000011895 CatipB9EKE5 520 aa24.74■■□□□ 1.55
Sptbn4-201ENSMUST00000011895 Mier1Q5UAK0 511 aa24.71■■□□□ 1.55
Sptbn4-201ENSMUST00000011895 Abcc9P70170 1546 aa24.64■■□□□ 1.54
Sptbn4-201ENSMUST00000011895 Gm13697A2AK42 830 aa24.57■■□□□ 1.52
Sptbn4-201ENSMUST00000011895 Ccer2J3QPU5 274 aa24.56■■□□□ 1.52
Sptbn4-201ENSMUST00000011895 Hsp90aa1P07901 733 aaKnown RBP24.52■■□□□ 1.52
Sptbn4-201ENSMUST00000011895 Hnrnpul2Q00PI9 745 aaKnown RBP24.48■■□□□ 1.51
Sptbn4-201ENSMUST00000011895 Ppargc1bQ8VHJ7 1014 aa24.46■■□□□ 1.51
Sptbn4-201ENSMUST00000011895 Anks4bQ8K3X6 423 aa24.45■■□□□ 1.5
Sptbn4-201ENSMUST00000011895 Aplp2Q06335 707 aa24.45■■□□□ 1.5
Sptbn4-201ENSMUST00000011895 Npm1Q61937 292 aaKnown RBP24.43■■□□□ 1.5
Sptbn4-201ENSMUST00000011895 Dcaf1Q80TR8 1506 aa24.41■■□□□ 1.5
Sptbn4-201ENSMUST00000011895 Polr3glQ8R0C0 218 aa24.37■■□□□ 1.49
Sptbn4-201ENSMUST00000011895 Gm35339A0A140LHH9 1649 aa24.35■■□□□ 1.49
Sptbn4-201ENSMUST00000011895 Brd4Q9ESU6 1400 aaKnown RBP24.31■■□□□ 1.48
Sptbn4-201ENSMUST00000011895 Atp1b4Q99ME6 356 aa24.29■■□□□ 1.48
Sptbn4-201ENSMUST00000011895 Trim44Q9QXA7 346 aa24.28■■□□□ 1.48
Sptbn4-201ENSMUST00000011895 Calr4Q3TQS0 420 aa24.26■■□□□ 1.47
Sptbn4-201ENSMUST00000011895 Erich6D3Z6S9 713 aa24.23■■□□□ 1.47
Sptbn4-201ENSMUST00000011895 Gm13695A2AK44 830 aa24.22■■□□□ 1.47
Sptbn4-201ENSMUST00000011895 Plekhg3Q4VAC9 1341 aa24.22■■□□□ 1.47
Sptbn4-201ENSMUST00000011895 Zbtb7cQ8VCZ7 619 aa24.2■■□□□ 1.47
Sptbn4-201ENSMUST00000011895 Cep164Q5DU05 1446 aa24.18■■□□□ 1.46
Sptbn4-201ENSMUST00000011895 Chic1Q8CBW7 227 aa24.15■■□□□ 1.46
Sptbn4-201ENSMUST00000011895 Lmod2Q3UHZ5 550 aa24.15■■□□□ 1.46
Sptbn4-201ENSMUST00000011895 Wdr43Q6ZQL4 677 aaKnown RBP24.14■■□□□ 1.45
Sptbn4-201ENSMUST00000011895 Lmod3E9QA62 571 aa24.12■■□□□ 1.45
Sptbn4-201ENSMUST00000011895 Adam1bQ8R534 806 aa24.11■■□□□ 1.45
Sptbn4-201ENSMUST00000011895 ArxO35085 564 aa24.1■■□□□ 1.45
Sptbn4-201ENSMUST00000011895 Ppp4r2Q0VGB7 417 aa24.1■■□□□ 1.45
Sptbn4-201ENSMUST00000011895 Clip1Q922J3 1391 aa24.1■■□□□ 1.45
Sptbn4-201ENSMUST00000011895 DekQ7TNV0 380 aaKnown RBP24.08■■□□□ 1.44
Sptbn4-201ENSMUST00000011895 Clstn2Q9ER65 966 aa24.03■■□□□ 1.44
Sptbn4-201ENSMUST00000011895 Htatsf1Q8BGC0 757 aa24.03■■□□□ 1.44
Sptbn4-201ENSMUST00000011895 Rb1cc1Q9ESK9 1588 aa23.97■■□□□ 1.43
Sptbn4-201ENSMUST00000011895 Csrnp3P59055 597 aa23.95■■□□□ 1.42
Sptbn4-201ENSMUST00000011895 Fgd1P52734 960 aa23.91■■□□□ 1.42
Sptbn4-201ENSMUST00000011895 Zbtb4Q5F293 982 aa23.9■■□□□ 1.42
Sptbn4-201ENSMUST00000011895 Hsp90ab1P11499 724 aaKnown RBP23.86■■□□□ 1.41
Sptbn4-201ENSMUST00000011895 Chmp4bQ9D8B3 224 aaKnown RBP23.85■■□□□ 1.41
Sptbn4-201ENSMUST00000011895 Znf326O88291 580 aa23.82■■□□□ 1.4
Sptbn4-201ENSMUST00000011895 PtmaP26350 111 aa23.81■■□□□ 1.4
Sptbn4-201ENSMUST00000011895 Prdm10Q3UTQ7 1184 aa23.78■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms