RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	TY1B-LR1	Q12088	1755 aa	Known RBP	3.9	□□□□□ -1.79
RSA1	YPL193W	TY1B-NL1	Q12112	1755 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	TY1B-GR1	Q12141	1755 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	TY1B-BL	Q12490	1755 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	URE2	P23202	354 aa	Known RBP	3.9	□□□□□ -1.79
RSA1	YPL193W	PRP22	P24384	1145 aa	Known RBP	3.9	□□□□□ -1.79
RSA1	YPL193W	BEM4	P39011	633 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	JHD1	P40034	492 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	TIM50	Q02776	476 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	COG8	Q04632	607 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	YPS7	Q06325	596 aa		3.9	□□□□□ -1.79
RSA1	YPL193W	PHO8	P11491	566 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	TSR4	P25040	408 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	MSH2	P25847	964 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	THI4	P32318	326 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	MAL31	P38156	614 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	MNT3	P40549	630 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	BUD8	P41698	603 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	PXA1	P41909	870 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	BFA1	P47113	574 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	YNL018C	P53976	612 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	YPL216W	Q08964	1102 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	YLR125W	Q12138	136 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	VPS15	P22219	1454 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	MMS22	Q06164	1454 aa		3.89	□□□□□ -1.79
RSA1	YPL193W	TRM732	Q03496	1420 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	IME1	P21190	360 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	MRPL7	P36519	292 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	PCI8	P40512	444 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	COQ6	P53318	479 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	UGO1	Q03327	502 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	EFR3	Q03653	782 aa	Known RBP	3.88	□□□□□ -1.79
RSA1	YPL193W	YDL073W	Q07454	984 aa		3.88	□□□□□ -1.79
RSA1	YPL193W	NUP159	P40477	1460 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	YAP1	P19880	650 aa	Known RBP	3.87	□□□□□ -1.79
RSA1	YPL193W	CNE1	P27825	502 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	ASK1	P35734	292 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	PXL1	P36166	706 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	APD1	P38281	316 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	EXO1	P39875	702 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	BUD17	P53727	317 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
RSA1	YPL193W	RPN4	Q03465	531 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	NEW1	Q08972	1196 aa	Known RBP	3.87	□□□□□ -1.79
RSA1	YPL193W	YOR093C	Q12275	1648 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	NTE1	Q04958	1679 aa		3.87	□□□□□ -1.79
RSA1	YPL193W	TOP2	P06786	1428 aa	Known RBP	3.87	□□□□□ -1.79
RSA1	YPL193W	WHI2	P12611	486 aa		3.86	□□□□□ -1.79
RSA1	YPL193W	BST1	P43571	1029 aa		3.86	□□□□□ -1.79
RSA1	YPL193W	YGR054W	P53235	642 aa	Known RBP	3.86	□□□□□ -1.79
RSA1	YPL193W	DOP1	Q03921	1698 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	RPO21	P04050	1733 aa	Known RBP	3.85	□□□□□ -1.79
RSA1	YPL193W	SPC97	P38863	823 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	CRG1	P38892	291 aa	RIP-Chip data	3.85	□□□□□ -1.79	not detected
RSA1	YPL193W	OPT1	P40897	799 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	BUD6	P41697	788 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	YFL015C	P43578	164 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	SPO1	P53541	631 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	LSC1	P53598	329 aa	Known RBP	3.85	□□□□□ -1.79
RSA1	YPL193W	IDP3	P53982	420 aa	Known RBP	3.85	□□□□□ -1.79
RSA1	YPL193W	HER1	Q12276	1246 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	CRC1	Q12289	327 aa		3.85	□□□□□ -1.79
RSA1	YPL193W	MAF1	P41910	395 aa		3.84	□□□□□ -1.79
RSA1	YPL193W	MET13	P53128	600 aa		3.84	□□□□□ -1.79
RSA1	YPL193W	FDC1	Q03034	503 aa		3.84	□□□□□ -1.79
RSA1	YPL193W	CEF1	Q03654	590 aa	Predicted RBP	3.84	□□□□□ -1.79
RSA1	YPL193W	GUD1	Q07729	489 aa		3.84	□□□□□ -1.79
RSA1	YPL193W	YMR084W	A2P2R3	262 aa		3.83	□□□□□ -1.8
RSA1	YPL193W	YMR085W	P0CF18	432 aa		3.83	□□□□□ -1.8
RSA1	YPL193W	RNR3	P21672	869 aa	Known RBP	3.83	□□□□□ -1.8
RSA1	YPL193W	GCS1	P35197	352 aa		3.83	□□□□□ -1.8
RSA1	YPL193W	FTR1	P40088	404 aa		3.83	□□□□□ -1.8
RSA1	YPL193W	BSP1	Q06604	576 aa		3.83	□□□□□ -1.8
RSA1	YPL193W	STP4	Q07351	490 aa		3.83	□□□□□ -1.8
RSA1	YPL193W	NUP170	P38181	1502 aa		3.82	□□□□□ -1.8
RSA1	YPL193W	PRE4	P30657	266 aa		3.82	□□□□□ -1.8
RSA1	YPL193W	PPN1	Q04119	674 aa		3.82	□□□□□ -1.8
RSA1	YPL193W	YLR111W	Q12528	110 aa		3.82	□□□□□ -1.8
RSA1	YPL193W	SPO14	P36126	1683 aa		3.81	□□□□□ -1.8
RSA1	YPL193W	YPR089W	O13585	888 aa		3.81	□□□□□ -1.8
RSA1	YPL193W	DUN1	P39009	513 aa		3.81	□□□□□ -1.8
RSA1	YPL193W	GFD1	Q04839	188 aa	Known RBP	3.81	□□□□□ -1.8
RSA1	YPL193W	ENT2	Q05785	613 aa		3.81	□□□□□ -1.8
RSA1	YPL193W	NTG2	Q08214	380 aa		3.81	□□□□□ -1.8
RSA1	YPL193W	RDL1	Q12305	139 aa	Known RBP	3.81	□□□□□ -1.8
RSA1	YPL193W	RPS17A	P02407	136 aa	Known RBP	3.8	□□□□□ -1.8
RSA1	YPL193W	RPS17B	P14127	136 aa	Known RBP	3.8	□□□□□ -1.8
RSA1	YPL193W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
RSA1	YPL193W	YEL025C	P39991	1188 aa		3.8	□□□□□ -1.8
RSA1	YPL193W	SPP41	P38904	1435 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	GSY2	P27472	705 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	DHR2	P36009	735 aa	Predicted RBP	3.79	□□□□□ -1.8
RSA1	YPL193W	CDS1	P38221	457 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	TDA3	P38758	523 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	CCT4	P39078	528 aa	Known RBP	3.79	□□□□□ -1.8
RSA1	YPL193W	YIL024C	P40543	189 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	TAF4	P50105	388 aa		3.79	□□□□□ -1.8
RSA1	YPL193W	NOP15	P53927	220 aa	Predicted RBP	3.79	□□□□□ -1.8
RSA1	YPL193W	RPS15	Q01855	142 aa	Known RBP	3.79	□□□□□ -1.8
RSA1	YPL193W	WAR1	Q03631	944 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms