RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C LYS9P38999 446 aa3.73□□□□□ -1.81
VPS53YJL029C MDJ2P42834 146 aa3.73□□□□□ -1.81
VPS53YJL029C SNZ3P43545 298 aa3.73□□□□□ -1.81
VPS53YJL029C SNZ2P53824 298 aa3.73□□□□□ -1.81
VPS53YJL029C YNL247WP53852 767 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C EAF7P53911 425 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C HPF1Q05164 967 aa3.73□□□□□ -1.81
VPS53YJL029C AIM39Q08223 395 aa3.73□□□□□ -1.81
VPS53YJL029C TMA16Q08687 178 aa3.73□□□□□ -1.81
VPS53YJL029C LPX1Q12405 387 aaKnown RBP3.73□□□□□ -1.81
VPS53YJL029C YBL113CQ7M4S9 792 aa3.73□□□□□ -1.81
VPS53YJL029C VPS5Q92331 675 aa3.73□□□□□ -1.81
VPS53YJL029C CBF2P32504 956 aa3.72□□□□□ -1.81
VPS53YJL029C ABD1P32783 436 aaPredicted RBP3.72□□□□□ -1.81
VPS53YJL029C SMC1P32908 1225 aa3.72□□□□□ -1.81
VPS53YJL029C EBP2P36049 427 aaKnown RBP3.72□□□□□ -1.81
VPS53YJL029C CRP1P38845 465 aaKnown RBP3.72□□□□□ -1.81
VPS53YJL029C EXO1P39875 702 aa3.72□□□□□ -1.81
VPS53YJL029C VAC8P39968 578 aa3.72□□□□□ -1.81
VPS53YJL029C PSY2P40164 858 aa3.72□□□□□ -1.81
VPS53YJL029C OSW5P40219 148 aa3.72□□□□□ -1.81
VPS53YJL029C UFE1P41834 346 aa3.72□□□□□ -1.81
VPS53YJL029C YJR079WP47126 109 aa3.72□□□□□ -1.81
VPS53YJL029C KXD1P53158 218 aa3.72□□□□□ -1.81
VPS53YJL029C YNR061CP53747 219 aa3.72□□□□□ -1.81
VPS53YJL029C VPS75P53853 264 aa3.72□□□□□ -1.81
VPS53YJL029C SND1Q04007 877 aa3.72□□□□□ -1.81
VPS53YJL029C YLR012CQ07927 99 aa3.72□□□□□ -1.81
VPS53YJL029C HMI1Q12039 706 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-DR4O74302 440 aa3.72□□□□□ -1.81
VPS53YJL029C MIS1P09440 975 aaKnown RBP3.72□□□□□ -1.81
VPS53YJL029C TY1A-HP0C2I4 478 aaKnown RBP3.72□□□□□ -1.81
VPS53YJL029C TY1A-AP0CX57 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-PR1P0CX58 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-ORP0CX59 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-PR2P0CX60 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-DR5P0CX65 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-ER2P0CX66 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-GR3P0CX67 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-LR1P0CX68 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-MR2P0CX69 440 aa3.72□□□□□ -1.81
VPS53YJL029C SIR1P21691 654 aa3.72□□□□□ -1.81
VPS53YJL029C ROX1P25042 368 aa3.72□□□□□ -1.81
VPS53YJL029C SWE1P32944 819 aa3.72□□□□□ -1.81
VPS53YJL029C XRS2P33301 854 aa3.72□□□□□ -1.81
VPS53YJL029C MRPL10P36520 322 aa3.72□□□□□ -1.81
VPS53YJL029C MRPL40P36534 297 aa3.72□□□□□ -1.81
VPS53YJL029C YBR056WP38081 501 aa3.72□□□□□ -1.81
VPS53YJL029C RKM3P38222 552 aa3.72□□□□□ -1.81
VPS53YJL029C SPT8P38915 602 aa3.72□□□□□ -1.81
VPS53YJL029C PRM9P39551 298 aa3.72□□□□□ -1.81
VPS53YJL029C RMD8P43620 662 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-JR2P47099 440 aa3.72□□□□□ -1.81
VPS53YJL029C YGR111WP53265 400 aa3.72□□□□□ -1.81
VPS53YJL029C CAF120P53836 1060 aa3.72□□□□□ -1.81
VPS53YJL029C PIR3Q03180 325 aa3.72□□□□□ -1.81
VPS53YJL029C CLU1Q03690 1277 aaKnown RBP3.72□□□□□ -1.81
VPS53YJL029C TY1A-DR1Q03856 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-ML1Q04706 440 aaKnown RBP3.72□□□□□ -1.81
VPS53YJL029C YML053CQ04978 212 aa3.72□□□□□ -1.81
VPS53YJL029C YLR287CQ05881 355 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-BRQ12217 440 aa3.72□□□□□ -1.81
VPS53YJL029C SPO21Q12411 609 aa3.72□□□□□ -1.81
VPS53YJL029C WHI5Q12416 295 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-NL2Q12470 440 aa3.72□□□□□ -1.81
VPS53YJL029C TY1A-GR2Q12485 440 aa3.72□□□□□ -1.81
VPS53YJL029C BI2P03873 423 aa3.71□□□□□ -1.81
VPS53YJL029C BI4P03879 638 aa3.71□□□□□ -1.81
VPS53YJL029C TUP1P16649 713 aa3.71□□□□□ -1.81
VPS53YJL029C SRB2P34162 210 aa3.71□□□□□ -1.81
VPS53YJL029C SEG2P34250 1132 aa3.71□□□□□ -1.81
VPS53YJL029C ERP2P39704 215 aa3.71□□□□□ -1.81
VPS53YJL029C PRK1P40494 810 aa3.71□□□□□ -1.81
VPS53YJL029C DJP1P40564 432 aa3.71□□□□□ -1.81
VPS53YJL029C VTC4P47075 721 aa3.71□□□□□ -1.81
VPS53YJL029C YGR021WP53212 290 aa3.71□□□□□ -1.81
VPS53YJL029C TDA7P53882 636 aaPredicted RBP3.71□□□□□ -1.81
VPS53YJL029C CWC2Q12046 339 aaPredicted RBP3.71□□□□□ -1.81
VPS53YJL029C BI3Q9ZZW7 517 aa3.71□□□□□ -1.81
VPS53YJL029C MSH3P25336 1018 aa3.71□□□□□ -1.82
VPS53YJL029C SEC1P30619 724 aaKnown RBP3.71□□□□□ -1.82
VPS53YJL029C SHM1P37292 490 aaPredicted RBP3.71□□□□□ -1.82
VPS53YJL029C SWC5P38326 303 aa3.71□□□□□ -1.82
VPS53YJL029C SPC72P39723 622 aa3.71□□□□□ -1.82
VPS53YJL029C YDR222WQ04925 415 aa3.71□□□□□ -1.82
VPS53YJL029C AAD4Q07747 329 aa3.71□□□□□ -1.82
VPS53YJL029C PUF3Q07807 879 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
VPS53YJL029C THI20Q08224 551 aa3.71□□□□□ -1.82
VPS53YJL029C ARP7Q12406 477 aa3.71□□□□□ -1.82
VPS53YJL029C MSB2P32334 1306 aa3.71□□□□□ -1.82
VPS53YJL029C RPS6AP0CX37 236 aaKnown RBP3.7□□□□□ -1.82
VPS53YJL029C RPS6BP0CX38 236 aaPredicted RBP3.7□□□□□ -1.82
VPS53YJL029C SEC2P17065 759 aa3.7□□□□□ -1.82
VPS53YJL029C PYC2P32327 1180 aaKnown RBP3.7□□□□□ -1.82
VPS53YJL029C KAP104P38217 918 aaKnown RBP3.7□□□□□ -1.82
VPS53YJL029C EXO5P38289 585 aa3.7□□□□□ -1.82
VPS53YJL029C OCA5P38738 679 aa3.7□□□□□ -1.82
VPS53YJL029C QNS1P38795 714 aaKnown RBP3.7□□□□□ -1.82
VPS53YJL029C LAM1P38851 1228 aa3.7□□□□□ -1.82
VPS53YJL029C DUN1P39009 513 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms