RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C NPR3P38742 1146 aa1.97□□□□□ -2.09
MSH6YDR097C RRM3P38766 723 aa1.97□□□□□ -2.09
MSH6YDR097C MAF1P41910 395 aa1.97□□□□□ -2.09
MSH6YDR097C GPD2P41911 440 aaKnown RBP1.97□□□□□ -2.09
MSH6YDR097C YGR250CP53316 781 aaKnown RBP1.97□□□□□ -2.09
MSH6YDR097C TIM10P87108 93 aa1.97□□□□□ -2.09
MSH6YDR097C YVH1Q02256 364 aaKnown RBP1.97□□□□□ -2.09
MSH6YDR097C LEE1Q02799 301 aaKnown RBP1.97□□□□□ -2.09
MSH6YDR097C YDR444WQ04093 687 aa1.97□□□□□ -2.09
MSH6YDR097C ARP9Q05123 467 aa1.97□□□□□ -2.09
MSH6YDR097C RSC58Q07979 502 aa1.97□□□□□ -2.09
MSH6YDR097C VTS1Q08831 523 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
MSH6YDR097C SOD2P00447 233 aa1.96□□□□□ -2.09
MSH6YDR097C HSP82P02829 709 aaKnown RBP1.96□□□□□ -2.09
MSH6YDR097C CDC31P06704 161 aaKnown RBP1.96□□□□□ -2.09
MSH6YDR097C POL3P15436 1097 aa1.96□□□□□ -2.09
MSH6YDR097C SEC15P22224 910 aa1.96□□□□□ -2.09
MSH6YDR097C MTH1P35198 433 aa1.96□□□□□ -2.09
MSH6YDR097C FLR1P38124 548 aa1.96□□□□□ -2.09
MSH6YDR097C STB5P38699 743 aa1.96□□□□□ -2.09
MSH6YDR097C ESL1P40456 1118 aa1.96□□□□□ -2.09
MSH6YDR097C CTH1P47976 325 aa1.96□□□□□ -2.09
MSH6YDR097C ZIP2P53061 704 aa1.96□□□□□ -2.09
MSH6YDR097C TNA1P53322 534 aa1.96□□□□□ -2.09
MSH6YDR097C NOG2P53742 486 aaKnown RBP1.96□□□□□ -2.09
MSH6YDR097C NOP15P53927 220 aaPredicted RBP1.96□□□□□ -2.09
MSH6YDR097C YLR149CQ99296 730 aa1.96□□□□□ -2.09
MSH6YDR097C SEM1O94742 89 aa1.96□□□□□ -2.1
MSH6YDR097C RER1P25560 188 aa1.96□□□□□ -2.1
MSH6YDR097C YCL049CP25577 312 aa1.96□□□□□ -2.1
MSH6YDR097C RPS7AP26786 190 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C RPT3P33298 428 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C SPC72P39723 622 aa1.96□□□□□ -2.1
MSH6YDR097C RMD8P43620 662 aa1.96□□□□□ -2.1
MSH6YDR097C SSY5P47002 699 aa1.96□□□□□ -2.1
MSH6YDR097C GCV2P49095 1034 aa1.96□□□□□ -2.1
MSH6YDR097C YAP1802P53309 568 aa1.96□□□□□ -2.1
MSH6YDR097C GPD1Q00055 391 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C STP3Q05937 343 aa1.96□□□□□ -2.1
MSH6YDR097C ARR3Q06598 404 aa1.96□□□□□ -2.1
MSH6YDR097C HRK1Q08732 759 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C UPC2Q12151 913 aa1.96□□□□□ -2.1
MSH6YDR097C HAL9Q12180 1030 aa1.96□□□□□ -2.1
MSH6YDR097C TAH18Q12181 623 aa1.96□□□□□ -2.1
MSH6YDR097C ARP7Q12406 477 aa1.96□□□□□ -2.1
MSH6YDR097C NHA1Q99271 985 aa1.96□□□□□ -2.1
MSH6YDR097C YML133CQ03099 1374 aa1.96□□□□□ -2.1
MSH6YDR097C YLL067CQ07888 1374 aa1.96□□□□□ -2.1
MSH6YDR097C SPS1P08458 490 aa1.96□□□□□ -2.1
MSH6YDR097C PMS1P14242 873 aa1.96□□□□□ -2.1
MSH6YDR097C PRP4P20053 465 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C VMA8P32610 256 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C PHM8P40025 321 aa1.96□□□□□ -2.1
MSH6YDR097C KHA1P40309 873 aa1.96□□□□□ -2.1
MSH6YDR097C UBP7P40453 1071 aa1.96□□□□□ -2.1
MSH6YDR097C SDP1P40479 209 aa1.96□□□□□ -2.1
MSH6YDR097C ZAP1P47043 880 aa1.96□□□□□ -2.1
MSH6YDR097C ATP22P50273 684 aaPredicted RBP1.96□□□□□ -2.1
MSH6YDR097C SAP4P53036 818 aa1.96□□□□□ -2.1
MSH6YDR097C ARG5,6Q01217 863 aa1.96□□□□□ -2.1
MSH6YDR097C TAF11Q04226 346 aa1.96□□□□□ -2.1
MSH6YDR097C YCG1Q06680 1035 aa1.96□□□□□ -2.1
MSH6YDR097C YOR352WQ08816 343 aa1.96□□□□□ -2.1
MSH6YDR097C CFT1Q06632 1357 aaKnown RBP1.96□□□□□ -2.1
MSH6YDR097C TPK1P06244 397 aa1.95□□□□□ -2.1
MSH6YDR097C YEL076C-AP0CX16 216 aa1.95□□□□□ -2.1
MSH6YDR097C YLR464WP0CX17 216 aa1.95□□□□□ -2.1
MSH6YDR097C RPS4AP0CX35 261 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C RPS4BP0CX36 261 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C ADH4P10127 382 aa1.95□□□□□ -2.1
MSH6YDR097C TPM1P17536 199 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C YCK2P23292 546 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C CAD1P24813 409 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C CWH43P25618 953 aa1.95□□□□□ -2.1
MSH6YDR097C TRK2P28584 889 aa1.95□□□□□ -2.1
MSH6YDR097C CCT3P39077 534 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C YEL076CP39971 216 aa1.95□□□□□ -2.1
MSH6YDR097C LSM5P40089 93 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C CTF18P49956 741 aa1.95□□□□□ -2.1
MSH6YDR097C YKR011CQ02209 353 aa1.95□□□□□ -2.1
MSH6YDR097C SYF1Q04048 859 aaPredicted RBP1.95□□□□□ -2.1
MSH6YDR097C RTK1Q12100 620 aaPredicted RBP1.95□□□□□ -2.1
MSH6YDR097C SMC6Q12749 1114 aa1.95□□□□□ -2.1
MSH6YDR097C YLR302CO13544 120 aa1.95□□□□□ -2.1
MSH6YDR097C SIR3P06701 978 aa1.95□□□□□ -2.1
MSH6YDR097C OLE1P21147 510 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C ADP1P25371 1049 aa1.95□□□□□ -2.1
MSH6YDR097C TEF4P36008 412 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C SDS22P36047 338 aa1.95□□□□□ -2.1
MSH6YDR097C SET3P36124 751 aa1.95□□□□□ -2.1
MSH6YDR097C YEL025CP39991 1188 aa1.95□□□□□ -2.1
MSH6YDR097C BST1P43571 1029 aa1.95□□□□□ -2.1
MSH6YDR097C SGM1P47166 707 aa1.95□□□□□ -2.1
MSH6YDR097C MNT2P53059 558 aa1.95□□□□□ -2.1
MSH6YDR097C VPS62P53285 467 aa1.95□□□□□ -2.1
MSH6YDR097C MTD1Q02046 320 aaKnown RBP1.95□□□□□ -2.1
MSH6YDR097C MFB1Q04922 465 aa1.95□□□□□ -2.1
MSH6YDR097C NMD4Q12129 218 aa1.95□□□□□ -2.1
MSH6YDR097C MED1Q12321 566 aa1.95□□□□□ -2.1
MSH6YDR097C PCD1Q12524 340 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms