RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	RPC53	P25441	422 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	FUN30	P31380	1131 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	MFT1	P33441	392 aa	Known RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	TVP38	P36164	337 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	APE3	P37302	537 aa	Known RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	YAP1801	P38856	637 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	HMF1	P40037	129 aa	Known RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	VFA1	P40080	203 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	ALR2	P43553	858 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	VID30	P53076	958 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	UTP8	P53276	713 aa	Known RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	CAF130	P53280	1122 aa	Predicted RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	TOF1	P53840	1238 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	ALF1	P53904	254 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	NCS2	P53923	493 aa	Predicted RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	YMR321C	Q04898	105 aa		5.78	□□□□□ -1.48
ROX3	YBL093C	NEW1	Q08972	1196 aa	Known RBP	5.78	□□□□□ -1.48
ROX3	YBL093C	PPR1	P07272	904 aa	Predicted RBP	5.77	□□□□□ -1.49
ROX3	YBL093C	SSB1	P11484	613 aa	Known RBP	5.77	□□□□□ -1.49
ROX3	YBL093C	PHO8	P11491	566 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	TUP1	P16649	713 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	SPO12	P17123	173 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	ARE1	P25628	610 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	YUR1	P26725	428 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	CDC11	P32458	415 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	YSC83	P32792	385 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	TFC4	P33339	1025 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	MNN4	P36044	1178 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	YRO2	P38079	344 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	GIC1	P38785	314 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	SSB2	P40150	613 aa	Known RBP	5.77	□□□□□ -1.49
ROX3	YBL093C	LCB2	P40970	561 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	PFD1	P46988	109 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	TIM54	P47045	478 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
ROX3	YBL093C	ERP6	P53198	216 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	ERG5	P54781	538 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	UME1	Q03010	460 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	YLR287C	Q05881	355 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	VPS38	Q05919	439 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	XYL2	Q07993	356 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	RRP6	Q12149	733 aa	Known RBP	5.77	□□□□□ -1.49
ROX3	YBL093C	TY3A-G	Q12173	290 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	TY3A-I	Q99219	290 aa		5.77	□□□□□ -1.49
ROX3	YBL093C	ENA1	P13587	1091 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	HSP60	P19882	572 aa	Known RBP	5.76	□□□□□ -1.49
ROX3	YBL093C	RRP43	P25359	394 aa	Predicted RBP	5.76	□□□□□ -1.49
ROX3	YBL093C	COT1	P32798	439 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	UBP13	P38187	747 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	ERC1	P38767	581 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	YEL025C	P39991	1188 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	ZRG8	P40021	1076 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	SHQ1	P40486	507 aa	Predicted RBP	5.76	□□□□□ -1.49
ROX3	YBL093C	OSW7	P43611	510 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	CCM1	P48237	864 aa	Predicted RBP	5.76	□□□□□ -1.49
ROX3	YBL093C	SPT20	P50875	604 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	SCS3	P53012	380 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	TAD1	P53065	400 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	HUL5	P53119	910 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	ENA2	Q01896	1091 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	GCN5	Q03330	439 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	COQ9	Q05779	260 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	YPR196W	Q06595	470 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	PLP2	Q12017	286 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	CDC53	Q12018	815 aa	Known RBP	5.76	□□□□□ -1.49
ROX3	YBL093C	ENA5	Q12691	1091 aa		5.76	□□□□□ -1.49
ROX3	YBL093C	CDC48	P25694	835 aa	Known RBP	5.75	□□□□□ -1.49
ROX3	YBL093C	RGT1	P32862	1170 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	TOD6	P34219	525 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	YKR078W	P36158	585 aa	Known RBP	5.75	□□□□□ -1.49
ROX3	YBL093C	IES1	P43579	692 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	RPS7B	P48164	190 aa	Known RBP	5.75	□□□□□ -1.49
ROX3	YBL093C	TAM41	P53230	385 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	GTF1	P53260	183 aa	Predicted RBP	5.75	□□□□□ -1.49
ROX3	YBL093C	RXT3	Q07458	294 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	RLP24	Q07915	199 aa	Known RBP	5.75	□□□□□ -1.49
ROX3	YBL093C	SMC5	Q08204	1093 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	GPB1	Q08886	897 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	TRM11	Q12463	433 aa		5.75	□□□□□ -1.49
ROX3	YBL093C	KIN82	P25341	720 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	RME1	P32338	300 aa	Known RBP	5.74	□□□□□ -1.49
ROX3	YBL093C	HBS1	P32769	611 aa	Known RBP	5.74	□□□□□ -1.49
ROX3	YBL093C	STO1	P34160	861 aa	Known RBP	5.74	□□□□□ -1.49
ROX3	YBL093C	ATG19	P35193	415 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	THI80	P35202	319 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	SIT1	P39980	628 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	SEC9	P40357	651 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	SDS3	P40505	327 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	EFM4	P40516	257 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	BOP3	P53958	396 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	DON1	Q05610	365 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	YLR297W	Q05899	129 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	CSR1	Q06705	408 aa	Known RBP	5.74	□□□□□ -1.49
ROX3	YBL093C	IES4	Q08561	116 aa		5.74	□□□□□ -1.49
ROX3	YBL093C	MTF2	P10849	440 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	POX1	P13711	748 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
ROX3	YBL093C	RAD57	P25301	460 aa		5.73	□□□□□ -1.49
ROX3	YBL093C	EFT1	P32324	842 aa	Known RBP	5.73	□□□□□ -1.49
ROX3	YBL093C	RPC82	P32349	654 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms