RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YNL146WP53906 100 aa4.21□□□□□ -1.73
PTA1YAL043C OSW2Q12202 724 aa4.21□□□□□ -1.73
PTA1YAL043C BI3Q9ZZW7 517 aa4.21□□□□□ -1.73
PTA1YAL043C ENO2P00925 437 aaKnown RBP4.21□□□□□ -1.74
PTA1YAL043C PEP5P12868 1029 aa4.21□□□□□ -1.74
PTA1YAL043C CDC42P19073 191 aa4.21□□□□□ -1.74
PTA1YAL043C CDC20P26309 610 aa4.21□□□□□ -1.74
PTA1YAL043C RPL5P26321 297 aaKnown RBP4.21□□□□□ -1.74
PTA1YAL043C MRE11P32829 692 aa4.21□□□□□ -1.74
PTA1YAL043C PEP12P32854 288 aa4.21□□□□□ -1.74
PTA1YAL043C HSP78P33416 811 aa4.21□□□□□ -1.74
PTA1YAL043C MCR1P36060 302 aaKnown RBP4.21□□□□□ -1.74
PTA1YAL043C ETR1P38071 380 aa4.21□□□□□ -1.74
PTA1YAL043C SOL4P53315 255 aa4.21□□□□□ -1.74
PTA1YAL043C HST2P53686 357 aa4.21□□□□□ -1.74
PTA1YAL043C OSH6Q02201 448 aa4.21□□□□□ -1.74
PTA1YAL043C CWC21Q03375 135 aaKnown RBP4.21□□□□□ -1.74
PTA1YAL043C YMR209CQ03648 457 aa4.21□□□□□ -1.74
PTA1YAL043C HFD1Q04458 532 aa4.21□□□□□ -1.74
PTA1YAL043C YLR257WQ06146 321 aaKnown RBP4.21□□□□□ -1.74
PTA1YAL043C UBX5Q06682 500 aa4.21□□□□□ -1.74
PTA1YAL043C MDM38Q08179 573 aa4.21□□□□□ -1.74
PTA1YAL043C SMC5Q08204 1093 aa4.21□□□□□ -1.74
PTA1YAL043C IES4Q08561 116 aa4.21□□□□□ -1.74
PTA1YAL043C SEM1O94742 89 aa4.2□□□□□ -1.74
PTA1YAL043C ADE4P04046 510 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C TCP1P12612 559 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C KAR4P25583 335 aa4.2□□□□□ -1.74
PTA1YAL043C SEC21P32074 935 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C PYC2P32327 1180 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C BUD2P33314 1104 aa4.2□□□□□ -1.74
PTA1YAL043C TGL4P36165 910 aa4.2□□□□□ -1.74
PTA1YAL043C SPC97P38863 823 aa4.2□□□□□ -1.74
PTA1YAL043C YIL001WP40560 513 aa4.2□□□□□ -1.74
PTA1YAL043C FIG4P42837 879 aa4.2□□□□□ -1.74
PTA1YAL043C SCD6P45978 349 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
PTA1YAL043C FAR3P46671 204 aa4.2□□□□□ -1.74
PTA1YAL043C PHO86P46956 311 aa4.2□□□□□ -1.74
PTA1YAL043C MDR1P53258 950 aa4.2□□□□□ -1.74
PTA1YAL043C TUB4P53378 473 aa4.2□□□□□ -1.74
PTA1YAL043C KTR5P53966 522 aaPredicted RBP4.2□□□□□ -1.74
PTA1YAL043C CUS1Q02554 436 aaPredicted RBP4.2□□□□□ -1.74
PTA1YAL043C TRS130Q03660 1102 aa4.2□□□□□ -1.74
PTA1YAL043C RKM2Q03942 479 aa4.2□□□□□ -1.74
PTA1YAL043C ERV41Q04651 352 aa4.2□□□□□ -1.74
PTA1YAL043C GTB1Q04924 702 aa4.2□□□□□ -1.74
PTA1YAL043C SPH1Q06160 661 aa4.2□□□□□ -1.74
PTA1YAL043C SBP1P10080 294 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C PMS1P14242 873 aa4.2□□□□□ -1.74
PTA1YAL043C SLY41P22215 453 aa4.2□□□□□ -1.74
PTA1YAL043C VAC17P25591 423 aa4.2□□□□□ -1.74
PTA1YAL043C URA7P28274 579 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C EUG1P32474 517 aa4.2□□□□□ -1.74
PTA1YAL043C PDX3P38075 228 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C PCA1P38360 1216 aa4.2□□□□□ -1.74
PTA1YAL043C SHC1P39000 512 aa4.2□□□□□ -1.74
PTA1YAL043C PIK1P39104 1066 aa4.2□□□□□ -1.74
PTA1YAL043C PAC1P39946 494 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C RIO2P40160 425 aaKnown RBP4.2□□□□□ -1.74
PTA1YAL043C CHS6P40955 746 aa4.2□□□□□ -1.74
PTA1YAL043C SCS3P53012 380 aa4.2□□□□□ -1.74
PTA1YAL043C TAF6P53040 516 aa4.2□□□□□ -1.74
PTA1YAL043C YGR127WP53275 312 aa4.2□□□□□ -1.74
PTA1YAL043C COS6P53344 381 aa4.2□□□□□ -1.74
PTA1YAL043C PRM6Q04705 352 aa4.2□□□□□ -1.74
PTA1YAL043C FAR10Q06001 478 aa4.2□□□□□ -1.74
PTA1YAL043C CDD1Q06549 142 aa4.2□□□□□ -1.74
PTA1YAL043C ATG20Q07528 640 aa4.2□□□□□ -1.74
PTA1YAL043C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
PTA1YAL043C AAD15Q08361 143 aa4.2□□□□□ -1.74
PTA1YAL043C TRE1Q08919 783 aa4.2□□□□□ -1.74
PTA1YAL043C YPR202WQ08993 238 aa4.2□□□□□ -1.74
PTA1YAL043C OCA6Q12454 224 aa4.2□□□□□ -1.74
PTA1YAL043C AI5_BETAQ9ZZX0 354 aa4.2□□□□□ -1.74
PTA1YAL043C ERG20P08524 352 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C URE2P23202 354 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C KIN82P25341 720 aa4.19□□□□□ -1.74
PTA1YAL043C RAD14P28519 371 aa4.19□□□□□ -1.74
PTA1YAL043C COT1P32798 439 aa4.19□□□□□ -1.74
PTA1YAL043C HES1P35843 434 aa4.19□□□□□ -1.74
PTA1YAL043C AGP2P38090 596 aa4.19□□□□□ -1.74
PTA1YAL043C PMC1P38929 1173 aaPredicted RBP4.19□□□□□ -1.74
PTA1YAL043C SLX8P40072 274 aa4.19□□□□□ -1.74
PTA1YAL043C LIA1P47120 325 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C YGR117CP53270 476 aa4.19□□□□□ -1.74
PTA1YAL043C VPS9P54787 451 aa4.19□□□□□ -1.74
PTA1YAL043C REX2P54964 269 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C ADY3Q07732 790 aa4.19□□□□□ -1.74
PTA1YAL043C CHS5Q12114 671 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C YVC1Q12324 675 aa4.19□□□□□ -1.74
PTA1YAL043C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
PTA1YAL043C TUB3P09734 445 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C YML002WP0CF17 737 aa4.19□□□□□ -1.74
PTA1YAL043C VMA2P16140 517 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C TKL1P23254 680 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C YCR015CP25616 317 aa4.19□□□□□ -1.74
PTA1YAL043C SEC1P30619 724 aaKnown RBP4.19□□□□□ -1.74
PTA1YAL043C SIN4P32259 974 aa4.19□□□□□ -1.74
PTA1YAL043C TMT1P32643 299 aa4.19□□□□□ -1.74
PTA1YAL043C NUP120P35729 1037 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms