RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 HXT7P39004 570 aa3.45□□□□□ -1.86
snR54snR54 DUN1P39009 513 aa3.45□□□□□ -1.86
snR54snR54 SPO1P53541 631 aa3.45□□□□□ -1.86
snR54snR54 ECM9Q02202 377 aa3.45□□□□□ -1.86
snR54snR54 NGL2Q03264 515 aaKnown RBP3.45□□□□□ -1.86
snR54snR54 MTQ2Q03920 221 aaPredicted RBP3.45□□□□□ -1.86
snR54snR54 SLK19Q08581 821 aaKnown RBP3.45□□□□□ -1.86
snR54snR54 SEC65P29478 273 aa3.44□□□□□ -1.86
snR54snR54 PRE4P30657 266 aa3.44□□□□□ -1.86
snR54snR54 FAT1P38225 669 aa3.44□□□□□ -1.86
snR54snR54 CRG1P38892 291 aaRIP-Chip data3.44□□□□□ -1.86not detected
snR54snR54 CCT5P40413 562 aaKnown RBP3.44□□□□□ -1.86
snR54snR54 SEG1Q04279 960 aa3.44□□□□□ -1.86
snR54snR54 ARG7Q04728 441 aa3.44□□□□□ -1.86
snR54snR54 RPS21AP0C0V8 87 aaKnown RBP3.43□□□□□ -1.86
snR54snR54 AAD3P25612 363 aa3.43□□□□□ -1.86
snR54snR54 OAF3P36023 863 aa3.43□□□□□ -1.86
snR54snR54 CDS1P38221 457 aa3.43□□□□□ -1.86
snR54snR54 FTR1P40088 404 aa3.43□□□□□ -1.86
snR54snR54 IES1P43579 692 aa3.43□□□□□ -1.86
snR54snR54 YJR142WP47173 342 aa3.43□□□□□ -1.86
snR54snR54 TAF4P50105 388 aa3.43□□□□□ -1.86
snR54snR54 YHM2Q04013 314 aa3.43□□□□□ -1.86
snR54snR54 YAP7Q08182 245 aa3.43□□□□□ -1.86
snR54snR54 LEU2P04173 364 aaPredicted RBP3.42□□□□□ -1.86
snR54snR54 MRPL7P36519 292 aa3.42□□□□□ -1.86
snR54snR54 PPE1P38796 400 aa3.42□□□□□ -1.86
snR54snR54 VID28P40547 921 aa3.42□□□□□ -1.86
snR54snR54 PIP2P52960 996 aa3.42□□□□□ -1.86
snR54snR54 YIP4P53093 235 aa3.42□□□□□ -1.86
snR54snR54 GPG1P53130 126 aa3.42□□□□□ -1.86
snR54snR54 YGL117WP53133 265 aa3.42□□□□□ -1.86
snR54snR54 YGR054WP53235 642 aaKnown RBP3.42□□□□□ -1.86
snR54snR54 FDC1Q03034 503 aa3.42□□□□□ -1.86
snR54snR54 PPN1Q04119 674 aa3.42□□□□□ -1.86
snR54snR54 NUP145P49687 1317 aa3.42□□□□□ -1.86
snR54snR54 PGK1P00560 416 aaKnown RBP3.41□□□□□ -1.86
snR54snR54 CDC26P14724 124 aa3.41□□□□□ -1.86
snR54snR54 TMT1P32643 299 aa3.41□□□□□ -1.86
snR54snR54 HOT13P36078 116 aa3.41□□□□□ -1.86
snR54snR54 EHT1P38295 451 aa3.41□□□□□ -1.86
snR54snR54 RIM4P38741 713 aa3.41□□□□□ -1.86
snR54snR54 NMD2P38798 1089 aaKnown RBP3.41□□□□□ -1.86
snR54snR54 OAF1P39720 1047 aaPredicted RBP3.41□□□□□ -1.86
snR54snR54 XBP1P40489 647 aa3.41□□□□□ -1.86
snR54snR54 PRM2P40534 656 aa3.41□□□□□ -1.86
snR54snR54 GZF3P42944 551 aaKnown RBP3.41□□□□□ -1.86
snR54snR54 DAK1P54838 584 aaKnown RBP3.41□□□□□ -1.86
snR54snR54 MFM1Q02783 413 aa3.41□□□□□ -1.86
snR54snR54 UME1Q03010 460 aa3.41□□□□□ -1.86
snR54snR54 EFR3Q03653 782 aaKnown RBP3.41□□□□□ -1.86
snR54snR54 HFI1Q12060 488 aa3.41□□□□□ -1.86
snR54snR54 ICT1Q12385 394 aa3.41□□□□□ -1.86
snR54snR54 AI5_ALPHAQ9ZZX1 630 aa3.41□□□□□ -1.86
snR54snR54 MBR1P23493 339 aa3.4□□□□□ -1.87
snR54snR54 YHR033WP38690 423 aa3.4□□□□□ -1.87
snR54snR54 BNA3P47039 444 aaKnown RBP3.4□□□□□ -1.87
snR54snR54 GLO1P50107 326 aa3.4□□□□□ -1.87
snR54snR54 CPR8P53728 308 aa3.4□□□□□ -1.87
snR54snR54 NSE5Q03718 556 aa3.4□□□□□ -1.87
snR54snR54 UTP14Q04500 899 aaKnown RBP3.4□□□□□ -1.87
snR54snR54 APN1P22936 367 aa3.39□□□□□ -1.87
snR54snR54 MTC7P32633 139 aa3.39□□□□□ -1.87
snR54snR54 THI6P41835 540 aa3.39□□□□□ -1.87
snR54snR54 YNR029CP53729 429 aaKnown RBP3.39□□□□□ -1.87
snR54snR54 YTM1Q12024 460 aaPredicted RBP3.39□□□□□ -1.87
snR54snR54 GPP1P41277 250 aaKnown RBP3.38□□□□□ -1.87
snR54snR54 MNN11P46985 422 aaKnown RBP3.38□□□□□ -1.87
snR54snR54 YDL183CP48569 320 aa3.38□□□□□ -1.87
snR54snR54 BUD17P53727 317 aa3.38□□□□□ -1.87
snR54snR54 PTA1Q01329 785 aaPredicted RBP3.38□□□□□ -1.87
snR54snR54 HLR1Q04429 423 aa3.38□□□□□ -1.87
snR54snR54 YCG1Q06680 1035 aa3.38□□□□□ -1.87
snR54snR54 ZPS1Q12512 249 aa3.38□□□□□ -1.87
snR54snR54 APM4Q99186 491 aa3.38□□□□□ -1.87
snR54snR54 SEC3P33332 1336 aaKnown RBP3.38□□□□□ -1.87
snR54snR54 CPA2P03965 1118 aaKnown RBP3.37□□□□□ -1.87
snR54snR54 PMA2P19657 947 aa3.37□□□□□ -1.87
snR54snR54 PTP1P25044 335 aa3.37□□□□□ -1.87
snR54snR54 CNE1P27825 502 aa3.37□□□□□ -1.87
snR54snR54 MF(ALPHA)2P32435 120 aa3.37□□□□□ -1.87
snR54snR54 DAL3P32459 195 aa3.37□□□□□ -1.87
snR54snR54 SER1P33330 395 aaKnown RBP3.37□□□□□ -1.87
snR54snR54 PIH1P38768 344 aa3.37□□□□□ -1.87
snR54snR54 GAT1P43574 510 aa3.37□□□□□ -1.87
snR54snR54 NET1P47035 1189 aa3.37□□□□□ -1.87
snR54snR54 PMT3P47190 753 aa3.37□□□□□ -1.87
snR54snR54 YNL018CP53976 612 aa3.37□□□□□ -1.87
snR54snR54 RPS15Q01855 142 aaKnown RBP3.37□□□□□ -1.87
snR54snR54 YPL216WQ08964 1102 aa3.37□□□□□ -1.87
snR54snR54 FRE7Q12333 620 aa3.37□□□□□ -1.87
snR54snR54 YGR161W-CQ3E744 92 aa3.37□□□□□ -1.87
snR54snR54 RPL7AP05737 244 aaKnown RBP3.36□□□□□ -1.87
snR54snR54 HMG2P12684 1045 aa3.36□□□□□ -1.87
snR54snR54 ACO1P19414 778 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
snR54snR54 YEL025CP39991 1188 aa3.36□□□□□ -1.87
snR54snR54 LTP1P40347 161 aa3.36□□□□□ -1.87
snR54snR54 YGR237CP50089 785 aa3.36□□□□□ -1.87
snR54snR54 CEF1Q03654 590 aaPredicted RBP3.36□□□□□ -1.87
snR54snR54 FAP7Q12055 197 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms