RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W GNP1P48813 663 aa3.83□□□□□ -1.8
MSD1YPL104W SCS3P53012 380 aa3.83□□□□□ -1.8
MSD1YPL104W RPA49Q01080 415 aaPredicted RBP3.83□□□□□ -1.8
MSD1YPL104W SPO20Q04359 397 aa3.83□□□□□ -1.8
MSD1YPL104W RPS3P05750 240 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W NAT1P12945 854 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W SDH2P21801 266 aa3.82□□□□□ -1.8
MSD1YPL104W CBF2P32504 956 aa3.82□□□□□ -1.8
MSD1YPL104W SKG6P32900 734 aaPredicted RBP3.82□□□□□ -1.8
MSD1YPL104W GPT2P36148 743 aa3.82□□□□□ -1.8
MSD1YPL104W MRX3P38172 270 aa3.82□□□□□ -1.8
MSD1YPL104W EXO5P38289 585 aa3.82□□□□□ -1.8
MSD1YPL104W PRE3P38624 215 aa3.82□□□□□ -1.8
MSD1YPL104W HIS2P38635 335 aa3.82□□□□□ -1.8
MSD1YPL104W ETP1P38748 585 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W TDA3P38758 523 aa3.82□□□□□ -1.8
MSD1YPL104W YTA12P40341 825 aa3.82□□□□□ -1.8
MSD1YPL104W PFD1P46988 109 aa3.82□□□□□ -1.8
MSD1YPL104W RPC17P47076 161 aa3.82□□□□□ -1.8
MSD1YPL104W HLJ1P48353 224 aa3.82□□□□□ -1.8
MSD1YPL104W MNP1P53163 194 aaPredicted RBP3.82□□□□□ -1.8
MSD1YPL104W TFB2Q02939 513 aa3.82□□□□□ -1.8
MSD1YPL104W DIG1Q03063 452 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W CEF1Q03654 590 aaPredicted RBP3.82□□□□□ -1.8
MSD1YPL104W TRS130Q03660 1102 aa3.82□□□□□ -1.8
MSD1YPL104W MSH6Q03834 1242 aa3.82□□□□□ -1.8
MSD1YPL104W PPM1Q04081 328 aa3.82□□□□□ -1.8
MSD1YPL104W SHE9Q04172 456 aa3.82□□□□□ -1.8
MSD1YPL104W ECM7Q06200 448 aa3.82□□□□□ -1.8
MSD1YPL104W HDA2Q06629 674 aa3.82□□□□□ -1.8
MSD1YPL104W IWR1Q07532 353 aaPredicted RBP3.82□□□□□ -1.8
MSD1YPL104W NUR1Q12066 484 aa3.82□□□□□ -1.8
MSD1YPL104W RMP1Q12530 201 aa3.82□□□□□ -1.8
MSD1YPL104W CDC8P00572 216 aa3.82□□□□□ -1.8
MSD1YPL104W SNA3P14359 133 aa3.82□□□□□ -1.8
MSD1YPL104W CDC42P19073 191 aa3.82□□□□□ -1.8
MSD1YPL104W DAL2P25335 343 aa3.82□□□□□ -1.8
MSD1YPL104W SBA1P28707 216 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W LYP1P32487 611 aa3.82□□□□□ -1.8
MSD1YPL104W TMT1P32643 299 aa3.82□□□□□ -1.8
MSD1YPL104W NFU1P32860 256 aa3.82□□□□□ -1.8
MSD1YPL104W MMS4P38257 691 aa3.82□□□□□ -1.8
MSD1YPL104W KSP1P38691 1029 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W NAB3P38996 802 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
MSD1YPL104W SPC72P39723 622 aa3.82□□□□□ -1.8
MSD1YPL104W ALR2P43553 858 aa3.82□□□□□ -1.8
MSD1YPL104W JJJ3P47138 172 aa3.82□□□□□ -1.8
MSD1YPL104W YGL140CP53120 1219 aa3.82□□□□□ -1.8
MSD1YPL104W YGR111WP53265 400 aa3.82□□□□□ -1.8
MSD1YPL104W URH1Q04179 340 aa3.82□□□□□ -1.8
MSD1YPL104W VTI1Q04338 217 aa3.82□□□□□ -1.8
MSD1YPL104W PMT7Q06644 662 aa3.82□□□□□ -1.8
MSD1YPL104W NOP6Q07623 225 aaKnown RBP3.82□□□□□ -1.8
MSD1YPL104W SHS1Q07657 551 aa3.82□□□□□ -1.8
MSD1YPL104W ICL2Q12031 575 aa3.82□□□□□ -1.8
MSD1YPL104W GIS3Q12418 502 aa3.82□□□□□ -1.8
MSD1YPL104W ZRT2Q12436 422 aa3.82□□□□□ -1.8
MSD1YPL104W AI5_BETAQ9ZZX0 354 aa3.82□□□□□ -1.8
MSD1YPL104W WHI2P12611 486 aa3.81□□□□□ -1.8
MSD1YPL104W COX11P19516 300 aaKnown RBP3.81□□□□□ -1.8
MSD1YPL104W AFT1P22149 690 aa3.81□□□□□ -1.8
MSD1YPL104W GCG1P32656 232 aaKnown RBP3.81□□□□□ -1.8
MSD1YPL104W CSG2P35206 410 aa3.81□□□□□ -1.8
MSD1YPL104W CIN4P39110 191 aa3.81□□□□□ -1.8
MSD1YPL104W YIL165CP40446 119 aa3.81□□□□□ -1.8
MSD1YPL104W SBE2P42223 864 aaKnown RBP3.81□□□□□ -1.8
MSD1YPL104W BRO1P48582 844 aa3.81□□□□□ -1.8
MSD1YPL104W ECI1Q05871 280 aa3.81□□□□□ -1.8
MSD1YPL104W REC8Q12188 680 aa3.81□□□□□ -1.8
MSD1YPL104W TMA17Q12513 150 aa3.81□□□□□ -1.8
MSD1YPL104W ECM3Q99252 613 aa3.81□□□□□ -1.8
MSD1YPL104W YLR462WO13556 202 aa3.8□□□□□ -1.8
MSD1YPL104W KAR1P11927 433 aa3.8□□□□□ -1.8
MSD1YPL104W IME1P21190 360 aa3.8□□□□□ -1.8
MSD1YPL104W RNR1P21524 888 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W PUF4P25339 888 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
MSD1YPL104W DBF4P32325 704 aa3.8□□□□□ -1.8
MSD1YPL104W TRM2P33753 639 aa3.8□□□□□ -1.8
MSD1YPL104W BET3P36149 193 aa3.8□□□□□ -1.8
MSD1YPL104W NCL1P38205 684 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W OLA1P38219 394 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W YHL049CP38722 271 aa3.8□□□□□ -1.8
MSD1YPL104W YEL075CP39972 122 aa3.8□□□□□ -1.8
MSD1YPL104W YER189WP40104 122 aa3.8□□□□□ -1.8
MSD1YPL104W YFL064CP43540 174 aa3.8□□□□□ -1.8
MSD1YPL104W MIC19P43594 170 aa3.8□□□□□ -1.8
MSD1YPL104W PHO86P46956 311 aa3.8□□□□□ -1.8
MSD1YPL104W DAS1P47005 663 aa3.8□□□□□ -1.8
MSD1YPL104W HSV2P50079 448 aaPredicted RBP3.8□□□□□ -1.8
MSD1YPL104W PEX8P53248 589 aa3.8□□□□□ -1.8
MSD1YPL104W DRN1P53255 507 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W UTP8P53276 713 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W CUS1Q02554 436 aaPredicted RBP3.8□□□□□ -1.8
MSD1YPL104W MSC2Q03455 724 aa3.8□□□□□ -1.8
MSD1YPL104W YDR222WQ04925 415 aa3.8□□□□□ -1.8
MSD1YPL104W ABP140Q08641 628 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W APL5Q08951 932 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W RIO1Q12196 484 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W SPO21Q12411 609 aa3.8□□□□□ -1.8
MSD1YPL104W ZPS1Q12512 249 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms