RNA–Protein interactions for RNA: YOR373W

NUD1, Transcript of Component of the spindle pole body outer plaque, yeast

Gene NUD1, Length 2,556 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUD1	YOR373W	RAD33	Q04231	177 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	MLC2	Q06580	163 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	OPY2	Q06810	360 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	SPO75	Q07798	868 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	NIC96	P34077	839 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	KTR4	P38131	464 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	CIR1	P42940	261 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	PBP1	P53297	722 aa	Known RBP	5.88	□□□□□ -1.47
NUD1	YOR373W	MEP3	P53390	489 aa		5.88	□□□□□ -1.47
NUD1	YOR373W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.88	□□□□□ -1.47	not detected
NUD1	YOR373W	GLK1	P17709	500 aa	Known RBP	5.87	□□□□□ -1.47
NUD1	YOR373W	VAN1	P23642	535 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	CDC15	P27636	974 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	YEL1	P34225	687 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	HEL1	P36113	551 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	SOL3	P38858	249 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	YIL166C	P40445	542 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	MOB1	P40484	314 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	RSM25	P40496	264 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	ULI1	P43604	169 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	PFD1	P46988	109 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	NPY1	P53164	384 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	PNG1	Q02890	363 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	SHS1	Q07657	551 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	PRC1	P00729	532 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	RAD16	P31244	790 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	SLA2	P33338	968 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	DHR2	P36009	735 aa	Predicted RBP	5.87	□□□□□ -1.47
NUD1	YOR373W	EAP1	P36041	632 aa	Known RBP	5.87	□□□□□ -1.47
NUD1	YOR373W	YHL008C	P38750	627 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	UBP5	P39944	805 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	LEM3	P42838	414 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	KRE33	P53914	1056 aa	Known RBP	5.87	□□□□□ -1.47
NUD1	YOR373W	CDC55	Q00362	526 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	STP1	Q00947	519 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	EEB1	Q02891	456 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	YPR109W	Q06104	294 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	ZPS1	Q12512	249 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	CTF3	Q12748	733 aa		5.87	□□□□□ -1.47
NUD1	YOR373W	ADE4	P04046	510 aa	Known RBP	5.86	□□□□□ -1.47
NUD1	YOR373W	TPK1	P06244	397 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	OM45	P16547	393 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	DAL7	P21826	554 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	PRE9	P23638	258 aa	Known RBP	5.86	□□□□□ -1.47
NUD1	YOR373W	VPS3	P23643	1011 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	APL1	P27351	700 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	APM2	P38700	605 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	XDJ1	P39102	459 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	RTT105	P40063	208 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	SDS3	P40505	327 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	POL31	P46957	487 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	SMC3	P47037	1230 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	SWA2	Q06677	668 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	FMP25	Q08023	583 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	MCD1	Q12158	566 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	APM4	Q99186	491 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	DAL80	P26343	269 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
NUD1	YOR373W	BET3	P36149	193 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	SHE3	P38272	425 aa	Known RBP	5.86	□□□□□ -1.47
NUD1	YOR373W	SIP5	P40210	489 aa	Known RBP	5.86	□□□□□ -1.47
NUD1	YOR373W	IRR1	P40541	1150 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	RAD17	P48581	401 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	YNR063W	P53749	607 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	SNP1	Q00916	300 aa	Predicted RBP	5.86	□□□□□ -1.47
NUD1	YOR373W	CWC21	Q03375	135 aa	Known RBP	5.86	□□□□□ -1.47
NUD1	YOR373W	BRE4	Q07660	1125 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	TLG2	Q08144	397 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	MDM38	Q08179	573 aa		5.86	□□□□□ -1.47
NUD1	YOR373W	GPA1	P08539	472 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	SLY41	P22215	453 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	MSP1	P28737	362 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	MKK2	P32491	506 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	RAD55	P38953	406 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	MEF2	P39677	819 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	VPS25	P47142	202 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	PSP1	P50896	841 aa	Known RBP	5.85	□□□□□ -1.47
NUD1	YOR373W	SPC98	P53540	846 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	ALF1	P53904	254 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	TAF11	Q04226	346 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	FAL1	Q12099	399 aa	Known RBP	5.85	□□□□□ -1.47
NUD1	YOR373W	TRS33	Q99394	268 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	RIP-Chip
NUD1	YOR373W	REC107	P21651	314 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	TRK2	P28584	889 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	PEX28	P38848	579 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	CCC2	P38995	1004 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	TOS3	P43637	560 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	AIP1	P46680	615 aa	Known RBP	5.85	□□□□□ -1.47
NUD1	YOR373W	STR2	P47164	639 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	HSH155	P49955	971 aa	Known RBP	5.85	□□□□□ -1.47
NUD1	YOR373W	HSV2	P50079	448 aa	Predicted RBP	5.85	□□□□□ -1.47
NUD1	YOR373W	KEL2	P50090	882 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	YNL011C	P53980	444 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	LEE1	Q02799	301 aa	Known RBP	5.85	□□□□□ -1.47
NUD1	YOR373W	LCD1	Q04377	747 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	FRA1	Q07825	749 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	TAF10	Q12030	206 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	YDL206W	Q12424	762 aa		5.85	□□□□□ -1.47
NUD1	YOR373W	BAP2	P38084	609 aa		5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms