RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W PMT3P47190 753 aa3.52□□□□□ -1.85
CTK3YML112W TAF4P50105 388 aa3.52□□□□□ -1.85
CTK3YML112W SPO1P53541 631 aa3.52□□□□□ -1.85
CTK3YML112W YNR029CP53729 429 aaKnown RBP3.52□□□□□ -1.85
CTK3YML112W DAK1P54838 584 aaKnown RBP3.52□□□□□ -1.85
CTK3YML112W YDR179W-AQ03983 463 aa3.52□□□□□ -1.85
CTK3YML112W AFT2Q08957 416 aa3.52□□□□□ -1.85
CTK3YML112W YTM1Q12024 460 aaPredicted RBP3.52□□□□□ -1.85
CTK3YML112W STE4P18851 423 aa3.51□□□□□ -1.85
CTK3YML112W PPE1P38796 400 aa3.51□□□□□ -1.85
CTK3YML112W THI6P41835 540 aa3.51□□□□□ -1.85
CTK3YML112W IES1P43579 692 aa3.51□□□□□ -1.85
CTK3YML112W UME1Q03010 460 aa3.51□□□□□ -1.85
CTK3YML112W FDC1Q03034 503 aa3.51□□□□□ -1.85
CTK3YML112W YHM2Q04013 314 aa3.51□□□□□ -1.85
CTK3YML112W ULA1Q12059 462 aa3.51□□□□□ -1.85
CTK3YML112W HFI1Q12060 488 aa3.51□□□□□ -1.85
CTK3YML112W ERG11P10614 530 aa3.5□□□□□ -1.85
CTK3YML112W GLN4P13188 809 aaKnown RBP3.5□□□□□ -1.85
CTK3YML112W OAF3P36023 863 aa3.5□□□□□ -1.85
CTK3YML112W DID4P36108 232 aa3.5□□□□□ -1.85
CTK3YML112W CDS1P38221 457 aa3.5□□□□□ -1.85
CTK3YML112W FAT1P38225 669 aa3.5□□□□□ -1.85
CTK3YML112W CRG1P38892 291 aaRIP-Chip data3.5□□□□□ -1.85not detected
CTK3YML112W FTR1P40088 404 aa3.5□□□□□ -1.85
CTK3YML112W MNN11P46985 422 aaKnown RBP3.5□□□□□ -1.85
CTK3YML112W YJR142WP47173 342 aa3.5□□□□□ -1.85
CTK3YML112W YGL117WP53133 265 aa3.5□□□□□ -1.85
CTK3YML112W NSE5Q03718 556 aa3.5□□□□□ -1.85
CTK3YML112W TRS23Q03784 219 aa3.5□□□□□ -1.85
CTK3YML112W RIM13Q03792 727 aa3.5□□□□□ -1.85
CTK3YML112W SEG1Q04279 960 aa3.5□□□□□ -1.85
CTK3YML112W ARG7Q04728 441 aa3.5□□□□□ -1.85
CTK3YML112W RPS21AP0C0V8 87 aaKnown RBP3.49□□□□□ -1.85
CTK3YML112W PIH1P38768 344 aa3.49□□□□□ -1.85
CTK3YML112W OAF1P39720 1047 aaPredicted RBP3.49□□□□□ -1.85
CTK3YML112W TAX4P47030 604 aa3.49□□□□□ -1.85
CTK3YML112W YGR054WP53235 642 aaKnown RBP3.49□□□□□ -1.85
CTK3YML112W CPR8P53728 308 aa3.49□□□□□ -1.85
CTK3YML112W PTA1Q01329 785 aaPredicted RBP3.49□□□□□ -1.85
CTK3YML112W EFR3Q03653 782 aaKnown RBP3.49□□□□□ -1.85
CTK3YML112W CEF1Q03654 590 aaPredicted RBP3.49□□□□□ -1.85
CTK3YML112W HFD1Q04458 532 aa3.49□□□□□ -1.85
CTK3YML112W TUP1P16649 713 aa3.48□□□□□ -1.85
CTK3YML112W AAD3P25612 363 aa3.48□□□□□ -1.85
CTK3YML112W PRM2P40534 656 aa3.48□□□□□ -1.85
CTK3YML112W VID28P40547 921 aa3.48□□□□□ -1.85
CTK3YML112W GPP1P41277 250 aaKnown RBP3.48□□□□□ -1.85
CTK3YML112W GPG1P53130 126 aa3.48□□□□□ -1.85
CTK3YML112W TIM50Q02776 476 aa3.48□□□□□ -1.85
CTK3YML112W HLR1Q04429 423 aa3.48□□□□□ -1.85
CTK3YML112W YGR161W-CQ3E744 92 aa3.48□□□□□ -1.85
CTK3YML112W APM4Q99186 491 aa3.48□□□□□ -1.85
CTK3YML112W NUP145P49687 1317 aa3.47□□□□□ -1.85
CTK3YML112W PGK1P00560 416 aaKnown RBP3.47□□□□□ -1.85
CTK3YML112W CDC26P14724 124 aa3.47□□□□□ -1.85
CTK3YML112W NUP1P20676 1076 aa3.47□□□□□ -1.85
CTK3YML112W CNE1P27825 502 aa3.47□□□□□ -1.85
CTK3YML112W MRPL7P36519 292 aa3.47□□□□□ -1.85
CTK3YML112W YHR033WP38690 423 aa3.47□□□□□ -1.85
CTK3YML112W RIM4P38741 713 aa3.47□□□□□ -1.85
CTK3YML112W YIP4P53093 235 aa3.47□□□□□ -1.85
CTK3YML112W MFM1Q02783 413 aa3.47□□□□□ -1.85
CTK3YML112W ICT1Q12385 394 aa3.47□□□□□ -1.85
CTK3YML112W ZPS1Q12512 249 aa3.47□□□□□ -1.85
CTK3YML112W ACO1P19414 778 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
CTK3YML112W APN1P22936 367 aa3.46□□□□□ -1.86
CTK3YML112W PTP1P25044 335 aa3.46□□□□□ -1.86
CTK3YML112W DGR2P32330 852 aa3.46□□□□□ -1.86
CTK3YML112W MF(ALPHA)2P32435 120 aa3.46□□□□□ -1.86
CTK3YML112W FPR3P38911 411 aaKnown RBP3.46□□□□□ -1.86
CTK3YML112W BNA3P47039 444 aaKnown RBP3.46□□□□□ -1.86
CTK3YML112W YGR237CP50089 785 aa3.46□□□□□ -1.86
CTK3YML112W GLO1P50107 326 aa3.46□□□□□ -1.86
CTK3YML112W AIM41Q12032 185 aa3.46□□□□□ -1.86
CTK3YML112W FAP7Q12055 197 aaPredicted RBP3.46□□□□□ -1.86
CTK3YML112W AI5_ALPHAQ9ZZX1 630 aa3.46□□□□□ -1.86
CTK3YML112W PMA2P19657 947 aa3.45□□□□□ -1.86
CTK3YML112W MTC7P32633 139 aa3.45□□□□□ -1.86
CTK3YML112W DHR2P36009 735 aaPredicted RBP3.45□□□□□ -1.86
CTK3YML112W YEL025CP39991 1188 aa3.45□□□□□ -1.86
CTK3YML112W XBP1P40489 647 aa3.45□□□□□ -1.86
CTK3YML112W ATG36P46983 293 aa3.45□□□□□ -1.86
CTK3YML112W ENP2P48234 707 aaKnown RBP3.45□□□□□ -1.86
CTK3YML112W ARR3Q06598 404 aa3.45□□□□□ -1.86
CTK3YML112W YDL073WQ07454 984 aa3.45□□□□□ -1.86
CTK3YML112W YPL216WQ08964 1102 aa3.45□□□□□ -1.86
CTK3YML112W CPA2P03965 1118 aaKnown RBP3.44□□□□□ -1.86
CTK3YML112W HOT13P36078 116 aa3.44□□□□□ -1.86
CTK3YML112W EHT1P38295 451 aa3.44□□□□□ -1.86
CTK3YML112W COQ6P53318 479 aa3.44□□□□□ -1.86
CTK3YML112W BUD17P53727 317 aa3.44□□□□□ -1.86
CTK3YML112W YNL018CP53976 612 aa3.44□□□□□ -1.86
CTK3YML112W YCG1Q06680 1035 aa3.44□□□□□ -1.86
CTK3YML112W YAP7Q08182 245 aa3.44□□□□□ -1.86
CTK3YML112W LEU2P04173 364 aaPredicted RBP3.43□□□□□ -1.86
CTK3YML112W WHI2P12611 486 aa3.43□□□□□ -1.86
CTK3YML112W CAP1P28495 268 aaKnown RBP3.43□□□□□ -1.86
CTK3YML112W TMT1P32643 299 aa3.43□□□□□ -1.86
CTK3YML112W RMA1P36001 430 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms