RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCI8	YIL071C	HMO1	Q03973	246 aa	Known RBP	4.21	□□□□□ -1.73
PCI8	YIL071C	LAM4	P38800	1345 aa		4.21	□□□□□ -1.73
PCI8	YIL071C	TPK2	P06245	380 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	ESL2	P36168	1195 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	APL3	P38065	1025 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	PMT6	P42934	759 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	IRC8	P47046	822 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	BNA2	P47125	453 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	COX18	P53239	316 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	PDS5	Q04264	1277 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	IRC3	Q06683	689 aa		4.21	□□□□□ -1.74
PCI8	YIL071C	USO1	P25386	1790 aa		4.2	□□□□□ -1.74
PCI8	YIL071C	BCS1	P32839	456 aa		4.2	□□□□□ -1.74
PCI8	YIL071C	BIT2	P38346	545 aa		4.2	□□□□□ -1.74
PCI8	YIL071C	YAP3	P38749	330 aa		4.2	□□□□□ -1.74
PCI8	YIL071C	NMA2	P53204	395 aa		4.2	□□□□□ -1.74
PCI8	YIL071C	SSF2	Q12153	453 aa	Predicted RBP	4.2	□□□□□ -1.74
PCI8	YIL071C	RAD9	P14737	1309 aa		4.19	□□□□□ -1.74
PCI8	YIL071C	YHR097C	P38809	366 aa	Known RBP	4.19	□□□□□ -1.74
PCI8	YIL071C	NOP9	P47077	666 aa	Known RBP	4.19	□□□□□ -1.74
PCI8	YIL071C	CHS5	Q12114	671 aa	Known RBP	4.19	□□□□□ -1.74
PCI8	YIL071C	AI5_ALPHA	Q9ZZX1	630 aa		4.19	□□□□□ -1.74
PCI8	YIL071C	YML133C	Q03099	1374 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	YLL067C	Q07888	1374 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	YLL066C	Q99208	1374 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	RAD18	P10862	487 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	RAD4	P14736	754 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	SPE2	P21182	396 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	YSH1	Q06224	779 aa	Predicted RBP	4.18	□□□□□ -1.74
PCI8	YIL071C	THI22	Q06490	572 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	ECM3	Q99252	613 aa		4.18	□□□□□ -1.74
PCI8	YIL071C	EUG1	P32474	517 aa		4.17	□□□□□ -1.74
PCI8	YIL071C	ATG36	P46983	293 aa		4.17	□□□□□ -1.74
PCI8	YIL071C	NEW1	Q08972	1196 aa	Known RBP	4.17	□□□□□ -1.74
PCI8	YIL071C	AIM44	Q99299	758 aa		4.17	□□□□□ -1.74
PCI8	YIL071C	BET3	P36149	193 aa		4.16	□□□□□ -1.74
PCI8	YIL071C	CTP1	P38152	299 aa		4.16	□□□□□ -1.74
PCI8	YIL071C	MPS3	P47069	682 aa		4.16	□□□□□ -1.74
PCI8	YIL071C	NPY1	P53164	384 aa		4.16	□□□□□ -1.74
PCI8	YIL071C	NGL2	Q03264	515 aa	Known RBP	4.16	□□□□□ -1.74
PCI8	YIL071C	RKI1	Q12189	258 aa		4.16	□□□□□ -1.74
PCI8	YIL071C	TY4B-H	P0C2J7	1802 aa		4.15	□□□□□ -1.74
PCI8	YIL071C	TY4B-J	P47024	1803 aa		4.15	□□□□□ -1.74
PCI8	YIL071C	YIL177C	P40434	1758 aa		4.15	□□□□□ -1.74
PCI8	YIL071C	YJL225C	P40889	1758 aa		4.15	□□□□□ -1.74
PCI8	YIL071C	ECM32	P32644	1121 aa	Known RBP	4.15	□□□□□ -1.75
PCI8	YIL071C	PAM1	P37304	830 aa	Known RBP	4.15	□□□□□ -1.75
PCI8	YIL071C	RSC8	P43609	557 aa	Known RBP	4.15	□□□□□ -1.75
PCI8	YIL071C	TY4A-J	P47023	414 aa		4.15	□□□□□ -1.75
PCI8	YIL071C	TIM54	P47045	478 aa		4.15	□□□□□ -1.75
PCI8	YIL071C	SNU71	P53207	620 aa	Known RBP	4.15	□□□□□ -1.75
PCI8	YIL071C	YDR179W-A	Q03983	463 aa		4.15	□□□□□ -1.75
PCI8	YIL071C	Q0142	Q9ZZW4	58 aa		4.15	□□□□□ -1.75
PCI8	YIL071C	CFT1	Q06632	1357 aa	Known RBP	4.14	□□□□□ -1.75
PCI8	YIL071C	NTH1	P32356	751 aa		4.14	□□□□□ -1.75
PCI8	YIL071C	BEM3	P32873	1128 aa		4.14	□□□□□ -1.75
PCI8	YIL071C	RPN10	P38886	268 aa	Known RBP	4.14	□□□□□ -1.75
PCI8	YIL071C	GID8	P40208	455 aa		4.14	□□□□□ -1.75
PCI8	YIL071C	ARG7	Q04728	441 aa		4.14	□□□□□ -1.75
PCI8	YIL071C	YEF3	P16521	1044 aa	Known RBP	4.13	□□□□□ -1.75
PCI8	YIL071C	VBA3	P25594	458 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	AAD3	P25612	363 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	KHA1	P40309	873 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	PIP2	P52960	996 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	DIP5	P53388	608 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	ATP23	P53722	227 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
PCI8	YIL071C	VPS36	Q06696	566 aa		4.13	□□□□□ -1.75
PCI8	YIL071C	KRE5	P22023	1365 aa		4.12	□□□□□ -1.75
PCI8	YIL071C	PSK1	P31374	1356 aa		4.12	□□□□□ -1.75
PCI8	YIL071C	NOP1	P15646	327 aa	Known RBP	4.12	□□□□□ -1.75
PCI8	YIL071C	IOC4	Q04213	475 aa		4.12	□□□□□ -1.75
PCI8	YIL071C	APC1	P53886	1748 aa		4.12	□□□□□ -1.75
PCI8	YIL071C	RRP5	Q05022	1729 aa	Known RBP	4.12	□□□□□ -1.75
PCI8	YIL071C	TSR4	P25040	408 aa		4.11	□□□□□ -1.75
PCI8	YIL071C	FEN2	P25621	512 aa	Known RBP	4.11	□□□□□ -1.75
PCI8	YIL071C	SEC6	P32844	805 aa		4.11	□□□□□ -1.75
PCI8	YIL071C	SPC97	P38863	823 aa		4.11	□□□□□ -1.75
PCI8	YIL071C	SCW4	P53334	386 aa	Known RBP	4.11	□□□□□ -1.75
PCI8	YIL071C	ERG13	P54839	491 aa	Known RBP	4.11	□□□□□ -1.75
PCI8	YIL071C	UFO1	Q04511	668 aa		4.11	□□□□□ -1.75
PCI8	YIL071C	FLC1	Q08967	793 aa		4.11	□□□□□ -1.75
PCI8	YIL071C	TUP1	P16649	713 aa		4.1	□□□□□ -1.75
PCI8	YIL071C	YEL1	P34225	687 aa		4.1	□□□□□ -1.75
PCI8	YIL071C	CHZ1	P40019	153 aa	Predicted RBP	4.1	□□□□□ -1.75
PCI8	YIL071C	YNL195C	P40168	261 aa		4.1	□□□□□ -1.75
PCI8	YIL071C	RFX1	P48743	811 aa		4.1	□□□□□ -1.75
PCI8	YIL071C	RPN7	Q06103	429 aa	Known RBP	4.1	□□□□□ -1.75
PCI8	YIL071C	RPP0	P05317	312 aa	Known RBP	4.09	□□□□□ -1.75
PCI8	YIL071C	ERG20	P08524	352 aa	Known RBP	4.09	□□□□□ -1.75
PCI8	YIL071C	YRF1-2	P40105	1681 aa		4.09	□□□□□ -1.76
PCI8	YIL071C	AUS1	Q08409	1394 aa		4.09	□□□□□ -1.76
PCI8	YIL071C	URB1	P34241	1764 aa	Known RBP	4.09	□□□□□ -1.76
PCI8	YIL071C	MRPL9	P31334	269 aa		4.08	□□□□□ -1.76
PCI8	YIL071C	MCD4	P36051	919 aa		4.08	□□□□□ -1.76
PCI8	YIL071C	CCT4	P39078	528 aa	Known RBP	4.08	□□□□□ -1.76
PCI8	YIL071C	VPS27	P40343	622 aa	Known RBP	4.08	□□□□□ -1.76
PCI8	YIL071C	RTA1	P53047	317 aa		4.08	□□□□□ -1.76
PCI8	YIL071C	PCL10	P53124	433 aa		4.08	□□□□□ -1.76
PCI8	YIL071C	YGL117W	P53133	265 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 84 ms