RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W DBF4P32325 704 aa2.5□□□□□ -2.01
TRA1YHR099W VPS45P38932 577 aa2.5□□□□□ -2.01
TRA1YHR099W FLC2P39719 783 aa2.5□□□□□ -2.01
TRA1YHR099W FAR8Q05040 523 aa2.5□□□□□ -2.01
TRA1YHR099W SNQ2P32568 1501 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W VPS1P21576 704 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W COX13P32799 129 aa2.5□□□□□ -2.01
TRA1YHR099W VAM7P32912 316 aa2.5□□□□□ -2.01
TRA1YHR099W HES1P35843 434 aa2.5□□□□□ -2.01
TRA1YHR099W TPO5P36029 618 aa2.5□□□□□ -2.01
TRA1YHR099W EGD2P38879 174 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W FAR3P46671 204 aa2.5□□□□□ -2.01
TRA1YHR099W YGR026WP53217 278 aa2.5□□□□□ -2.01
TRA1YHR099W VOA1P53262 265 aa2.5□□□□□ -2.01
TRA1YHR099W YGR266WP53326 701 aa2.5□□□□□ -2.01
TRA1YHR099W GOR1P53839 350 aa2.5□□□□□ -2.01
TRA1YHR099W CDC55Q00362 526 aa2.5□□□□□ -2.01
TRA1YHR099W EAR1Q03212 550 aa2.5□□□□□ -2.01
TRA1YHR099W YOL036WQ08206 761 aa2.5□□□□□ -2.01
TRA1YHR099W HMS1Q12398 434 aa2.5□□□□□ -2.01
TRA1YHR099W CFT1Q06632 1357 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W RIT1P23796 513 aa2.5□□□□□ -2.01
TRA1YHR099W MNR2P35724 969 aa2.5□□□□□ -2.01
TRA1YHR099W SHG1P38337 142 aa2.5□□□□□ -2.01
TRA1YHR099W YHL017WP38745 532 aa2.5□□□□□ -2.01
TRA1YHR099W AKR1P39010 764 aa2.5□□□□□ -2.01
TRA1YHR099W MET28P40573 187 aa2.5□□□□□ -2.01
TRA1YHR099W CAK1P43568 368 aaPredicted RBP2.5□□□□□ -2.01
TRA1YHR099W TAF6P53040 516 aa2.5□□□□□ -2.01
TRA1YHR099W SPP1Q03012 353 aa2.5□□□□□ -2.01
TRA1YHR099W EFR3Q03653 782 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W DYN3Q04949 312 aa2.5□□□□□ -2.01
TRA1YHR099W VPS74Q06385 345 aa2.5□□□□□ -2.01
TRA1YHR099W YDL144CQ07589 356 aa2.5□□□□□ -2.01
TRA1YHR099W KOG1P38873 1557 aa2.5□□□□□ -2.01
TRA1YHR099W CDC8P00572 216 aa2.5□□□□□ -2.01
TRA1YHR099W TSL1P38427 1098 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W SEC28P40509 296 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W LYS5P50113 272 aa2.5□□□□□ -2.01
TRA1YHR099W HTL1Q9URQ5 78 aa2.5□□□□□ -2.01
TRA1YHR099W CAN1P04817 590 aa2.5□□□□□ -2.01
TRA1YHR099W PFK1P16861 987 aaKnown RBP2.5□□□□□ -2.01
TRA1YHR099W RGD2P43556 714 aa2.5□□□□□ -2.01
TRA1YHR099W RRP46P53256 223 aaPredicted RBP2.5□□□□□ -2.01
TRA1YHR099W RPA49Q01080 415 aaPredicted RBP2.5□□□□□ -2.01
TRA1YHR099W YMR155WQ03795 547 aa2.5□□□□□ -2.01
TRA1YHR099W THP1Q08231 455 aa2.5□□□□□ -2.01
TRA1YHR099W APL4Q12028 832 aa2.5□□□□□ -2.01
TRA1YHR099W ATG29Q12092 213 aa2.5□□□□□ -2.01
TRA1YHR099W POM33Q12164 279 aa2.5□□□□□ -2.01
TRA1YHR099W INO1P11986 533 aa2.49□□□□□ -2.01
TRA1YHR099W KIN1P13185 1064 aa2.49□□□□□ -2.01
TRA1YHR099W PDX1P16451 410 aa2.49□□□□□ -2.01
TRA1YHR099W VPS34P22543 875 aa2.49□□□□□ -2.01
TRA1YHR099W PSO2P30620 661 aa2.49□□□□□ -2.01
TRA1YHR099W ECM32P32644 1121 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W KAP122P32767 1081 aa2.49□□□□□ -2.01
TRA1YHR099W MNN1P39106 762 aa2.49□□□□□ -2.01
TRA1YHR099W EXO1P39875 702 aa2.49□□□□□ -2.01
TRA1YHR099W ITT1Q04638 464 aa2.49□□□□□ -2.01
TRA1YHR099W TMA46Q12000 345 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W HER1Q12276 1246 aa2.49□□□□□ -2.01
TRA1YHR099W MSS1P32559 526 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W CSE4P36012 229 aa2.49□□□□□ -2.01
TRA1YHR099W AVT6P40074 448 aa2.49□□□□□ -2.01
TRA1YHR099W TOK1P40310 691 aa2.49□□□□□ -2.01
TRA1YHR099W PDS1P40316 373 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W SYO1Q07395 620 aa2.49□□□□□ -2.01
TRA1YHR099W YDL129WQ07555 291 aa2.49□□□□□ -2.01
TRA1YHR099W SGT1Q08446 395 aa2.49□□□□□ -2.01
TRA1YHR099W UAF30Q08747 228 aa2.49□□□□□ -2.01
TRA1YHR099W MLH3Q12083 715 aa2.49□□□□□ -2.01
TRA1YHR099W PRE9P23638 258 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W YME2P32843 850 aa2.49□□□□□ -2.01
TRA1YHR099W SSN8P47821 323 aa2.49□□□□□ -2.01
TRA1YHR099W COS6P53344 381 aa2.49□□□□□ -2.01
TRA1YHR099W COS1P53822 381 aa2.49□□□□□ -2.01
TRA1YHR099W APM1Q00776 475 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W RPN4Q03465 531 aa2.49□□□□□ -2.01
TRA1YHR099W CSN9Q03981 162 aa2.49□□□□□ -2.01
TRA1YHR099W RAD30Q04049 632 aa2.49□□□□□ -2.01
TRA1YHR099W UTP21Q06078 939 aaPredicted RBP2.49□□□□□ -2.01
TRA1YHR099W TRL1P09880 827 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W CNB1P25296 175 aa2.49□□□□□ -2.01
TRA1YHR099W UBC8P28263 218 aa2.49□□□□□ -2.01
TRA1YHR099W TOD6P34219 525 aa2.49□□□□□ -2.01
TRA1YHR099W GPT2P36148 743 aa2.49□□□□□ -2.01
TRA1YHR099W TGL4P36165 910 aa2.49□□□□□ -2.01
TRA1YHR099W RTG3P38165 486 aa2.49□□□□□ -2.01
TRA1YHR099W ATG36P46983 293 aa2.49□□□□□ -2.01
TRA1YHR099W PRO2P54885 456 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W YNG1Q08465 219 aa2.49□□□□□ -2.01
TRA1YHR099W TFC8Q12308 588 aa2.49□□□□□ -2.01
TRA1YHR099W PTC7P38797 343 aa2.49□□□□□ -2.01
TRA1YHR099W NPR2P39923 615 aa2.49□□□□□ -2.01
TRA1YHR099W IES5P40060 125 aa2.49□□□□□ -2.01
TRA1YHR099W FYV10P40492 516 aa2.49□□□□□ -2.01
TRA1YHR099W LSM8P47093 109 aaKnown RBP2.49□□□□□ -2.01
TRA1YHR099W SAS4Q04003 481 aa2.49□□□□□ -2.01
TRA1YHR099W TRS120Q04183 1289 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 93 ms