RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	MLH2	Q07980	695 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	SNF5	P18480	905 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	CDC42	P19073	191 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	MIH1	P23748	554 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	YKL050C	P35736	922 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	DDC1	Q08949	612 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	POL30	P15873	258 aa	Known RBP	5.92	□□□□□ -1.46
RSC30	YHR056C	XRS2	P33301	854 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	RCL1	Q08096	367 aa	Predicted RBP	5.92	□□□□□ -1.46
RSC30	YHR056C	CIR2	Q08822	631 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	HMI1	Q12039	706 aa		5.92	□□□□□ -1.46
RSC30	YHR056C	CYC8	P14922	966 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	DAL82	P21705	255 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	VAC8	P39968	578 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	YPS6	P40583	537 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	SUN4	P53616	420 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	GPD1	Q00055	391 aa	Known RBP	5.91	□□□□□ -1.46
RSC30	YHR056C	RRT12	P25381	491 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	YJL070C	P40361	888 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	UBP7	P40453	1071 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	VTC4	P47075	721 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	RGA2	Q06407	1009 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	NDD1	Q08887	554 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	NHA1	Q99271	985 aa		5.91	□□□□□ -1.46
RSC30	YHR056C	APM3	P38153	483 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	RFT1	P38206	574 aa	Predicted RBP	5.9	□□□□□ -1.46
RSC30	YHR056C	PCA1	P38360	1216 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	NPR3	P38742	1146 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	PFD1	P46988	109 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	YGL140C	P53120	1219 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	TBF1	Q02457	562 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	YFT2	Q06676	274 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	THI73	Q07904	523 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	GPR1	Q12361	961 aa		5.9	□□□□□ -1.46
RSC30	YHR056C	BRR2	P32639	2163 aa	Known RBP	5.9	□□□□□ -1.47
RSC30	YHR056C	SBP1	P10080	294 aa	Known RBP	5.9	□□□□□ -1.47
RSC30	YHR056C	SLX5	P32828	619 aa	Known RBP	5.9	□□□□□ -1.47
RSC30	YHR056C	BNI4	P53858	892 aa		5.9	□□□□□ -1.47
RSC30	YHR056C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.9	□□□□□ -1.47	not detected
RSC30	YHR056C	PPM1	Q04081	328 aa		5.9	□□□□□ -1.47
RSC30	YHR056C	RSB1	Q08417	382 aa		5.9	□□□□□ -1.47
RSC30	YHR056C	SAM3	Q08986	587 aa		5.9	□□□□□ -1.47
RSC30	YHR056C	RPL1A	P0CX43	217 aa	Known RBP	5.89	□□□□□ -1.47
RSC30	YHR056C	RPL1B	P0CX44	217 aa	Known RBP	5.89	□□□□□ -1.47
RSC30	YHR056C	ABD1	P32783	436 aa	Predicted RBP	5.89	□□□□□ -1.47
RSC30	YHR056C	SLD2	P34252	453 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	YBR053C	P38235	358 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	CHS7	P38843	316 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	BST1	P43571	1029 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	YOL024W	Q08172	172 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	SEC6	P32844	805 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	PRP24	P49960	444 aa	Known RBP	5.89	□□□□□ -1.47
RSC30	YHR056C	AQR1	P53943	586 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	AI5_BETA	Q9ZZX0	354 aa		5.89	□□□□□ -1.47
RSC30	YHR056C	CPA2	P03965	1118 aa	Known RBP	5.88	□□□□□ -1.47
RSC30	YHR056C	TRK2	P28584	889 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	CPR7	P47103	393 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	HOS3	Q02959	697 aa	Known RBP	5.88	□□□□□ -1.47
RSC30	YHR056C	TAF9	Q05027	157 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	VID22	Q05934	901 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	JIP3	O13555	125 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	SUC2	P00724	532 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	RGP1	P16664	663 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	MIC60	P36112	540 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	LTP1	P40347	161 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	RTS3	P53289	263 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	SUR7	P54003	302 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	COG4	Q06096	861 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	ECM3	Q99252	613 aa		5.88	□□□□□ -1.47
RSC30	YHR056C	ABF1	P14164	731 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	MAL33	P38157	468 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	FUI1	P38196	639 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	GIR2	Q03768	265 aa	Predicted RBP	5.87	□□□□□ -1.47
RSC30	YHR056C	YMR018W	Q04364	514 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	YML096W	Q04489	525 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	PER33	Q12144	273 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	YER152C	P10356	443 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	MDM38	Q08179	573 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	ARP7	Q12406	477 aa		5.87	□□□□□ -1.47
RSC30	YHR056C	PPR1	P07272	904 aa	Predicted RBP	5.86	□□□□□ -1.47
RSC30	YHR056C	MIS1	P09440	975 aa	Known RBP	5.86	□□□□□ -1.47
RSC30	YHR056C	ARF2	P19146	181 aa	Known RBP	5.86	□□□□□ -1.47
RSC30	YHR056C	IME1	P21190	360 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	DAL81	P21657	970 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	SBE2	P42223	864 aa	Known RBP	5.86	□□□□□ -1.47
RSC30	YHR056C	ALR2	P43553	858 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	YTP1	P53584	459 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	PRM1	P53835	661 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	CDC73	Q06697	393 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	NAG1	Q8TGN9	163 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	RPS3	P05750	240 aa	Known RBP	5.86	□□□□□ -1.47
RSC30	YHR056C	PMT1	P33775	817 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	ELO1	P39540	310 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	ARO80	Q04052	950 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	VPS54	Q12071	889 aa		5.86	□□□□□ -1.47
RSC30	YHR056C	CYM1	P32898	989 aa		5.85	□□□□□ -1.47
RSC30	YHR056C	SLX8	P40072	274 aa		5.85	□□□□□ -1.47
RSC30	YHR056C	RPL34B	P40525	121 aa	Known RBP	5.85	□□□□□ -1.47
RSC30	YHR056C	TGL2	P54857	326 aa		5.85	□□□□□ -1.47
RSC30	YHR056C	SPG3	Q04398	127 aa	Predicted RBP	5.85	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms