RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C RKI1Q12189 258 aa3.3□□□□□ -1.88
SMB1YER029C SEC65P29478 273 aa3.29□□□□□ -1.88
SMB1YER029C MTC7P32633 139 aa3.29□□□□□ -1.88
SMB1YER029C GMH1P36125 273 aa3.29□□□□□ -1.88
SMB1YER029C MUP3P38734 546 aa3.29□□□□□ -1.88
SMB1YER029C YHM2Q04013 314 aa3.29□□□□□ -1.88
SMB1YER029C VBA4Q04602 768 aaKnown RBP3.29□□□□□ -1.88
SMB1YER029C PHO5P00635 467 aa3.28□□□□□ -1.88
SMB1YER029C GLN4P13188 809 aaKnown RBP3.28□□□□□ -1.88
SMB1YER029C TUP1P16649 713 aa3.28□□□□□ -1.88
SMB1YER029C PRE4P30657 266 aa3.28□□□□□ -1.88
SMB1YER029C YMC2P38087 329 aa3.28□□□□□ -1.88
SMB1YER029C CDS1P38221 457 aa3.28□□□□□ -1.88
SMB1YER029C UBP12P39538 1254 aa3.28□□□□□ -1.88
SMB1YER029C XBP1P40489 647 aa3.28□□□□□ -1.88
SMB1YER029C VID28P40547 921 aa3.28□□□□□ -1.88
SMB1YER029C PXA1P41909 870 aa3.28□□□□□ -1.88
SMB1YER029C YGR237CP50089 785 aa3.28□□□□□ -1.88
SMB1YER029C MRK1P50873 501 aa3.28□□□□□ -1.88
SMB1YER029C NSE5Q03718 556 aa3.28□□□□□ -1.88
SMB1YER029C HLR1Q04429 423 aa3.28□□□□□ -1.88
SMB1YER029C YSH1Q06224 779 aaPredicted RBP3.28□□□□□ -1.88
SMB1YER029C LAM4P38800 1345 aa3.27□□□□□ -1.89
SMB1YER029C RPS9BP05755 195 aaKnown RBP3.27□□□□□ -1.89
SMB1YER029C ERG11P10614 530 aa3.27□□□□□ -1.89
SMB1YER029C MF(ALPHA)2P32435 120 aa3.27□□□□□ -1.89
SMB1YER029C SER1P33330 395 aaKnown RBP3.27□□□□□ -1.89
SMB1YER029C BRN1P38170 754 aa3.27□□□□□ -1.89
SMB1YER029C PRM2P40534 656 aa3.27□□□□□ -1.89
SMB1YER029C TAF4P50105 388 aa3.27□□□□□ -1.89
SMB1YER029C NMA2P53204 395 aa3.27□□□□□ -1.89
SMB1YER029C FDC1Q03034 503 aa3.27□□□□□ -1.89
SMB1YER029C CIR2Q08822 631 aa3.27□□□□□ -1.89
SMB1YER029C PGK1P00560 416 aaKnown RBP3.26□□□□□ -1.89
SMB1YER029C ABF1P14164 731 aa3.26□□□□□ -1.89
SMB1YER029C ACO1P19414 778 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SMB1YER029C DAL3P32459 195 aa3.26□□□□□ -1.89
SMB1YER029C DID4P36108 232 aa3.26□□□□□ -1.89
SMB1YER029C CRG1P38892 291 aaRIP-Chip data3.26□□□□□ -1.89not detected
SMB1YER029C FTR1P40088 404 aa3.26□□□□□ -1.89
SMB1YER029C BFA1P47113 574 aa3.26□□□□□ -1.89
SMB1YER029C YDL183CP48569 320 aa3.26□□□□□ -1.89
SMB1YER029C TIM50Q02776 476 aa3.26□□□□□ -1.89
SMB1YER029C YDR179W-AQ03983 463 aa3.26□□□□□ -1.89
SMB1YER029C PPN1Q04119 674 aa3.26□□□□□ -1.89
SMB1YER029C HFD1Q04458 532 aa3.26□□□□□ -1.89
SMB1YER029C SLK19Q08581 821 aaKnown RBP3.26□□□□□ -1.89
SMB1YER029C FAP7Q12055 197 aaPredicted RBP3.26□□□□□ -1.89
SMB1YER029C LEU2P04173 364 aaPredicted RBP3.25□□□□□ -1.89
SMB1YER029C STE4P18851 423 aa3.25□□□□□ -1.89
SMB1YER029C PRP22P24384 1145 aaKnown RBP3.25□□□□□ -1.89
SMB1YER029C KCC4P25389 1037 aa3.25□□□□□ -1.89
SMB1YER029C NTH1P32356 751 aa3.25□□□□□ -1.89
SMB1YER029C ELF1P36053 145 aa3.25□□□□□ -1.89
SMB1YER029C MRPL7P36519 292 aa3.25□□□□□ -1.89
SMB1YER029C DUN1P39009 513 aa3.25□□□□□ -1.89
SMB1YER029C TMN3P40071 706 aa3.25□□□□□ -1.89
SMB1YER029C GPP2P40106 250 aaKnown RBP3.25□□□□□ -1.89
SMB1YER029C MEP2P41948 499 aa3.25□□□□□ -1.89
SMB1YER029C PMT6P42934 759 aa3.25□□□□□ -1.89
SMB1YER029C YGL081WP53156 320 aa3.25□□□□□ -1.89
SMB1YER029C DIP5P53388 608 aa3.25□□□□□ -1.89
SMB1YER029C PTA1Q01329 785 aaPredicted RBP3.25□□□□□ -1.89
SMB1YER029C UFO1Q04511 668 aa3.25□□□□□ -1.89
SMB1YER029C ATP12P22135 325 aa3.24□□□□□ -1.89
SMB1YER029C SEC15P22224 910 aa3.24□□□□□ -1.89
SMB1YER029C HXT4P32467 576 aa3.24□□□□□ -1.89
SMB1YER029C GRX4P32642 244 aa3.24□□□□□ -1.89
SMB1YER029C DUG1P43616 481 aaKnown RBP3.24□□□□□ -1.89
SMB1YER029C NIT2P47016 307 aa3.24□□□□□ -1.89
SMB1YER029C ASN1P49089 572 aaKnown RBP3.24□□□□□ -1.89
SMB1YER029C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
SMB1YER029C TPK2P06245 380 aa3.23□□□□□ -1.89
SMB1YER029C HMG2P12684 1045 aa3.23□□□□□ -1.89
SMB1YER029C NUP1P20676 1076 aa3.23□□□□□ -1.89
SMB1YER029C APL3P38065 1025 aa3.23□□□□□ -1.89
SMB1YER029C YGR054WP53235 642 aaKnown RBP3.23□□□□□ -1.89
SMB1YER029C RPS15Q01855 142 aaKnown RBP3.23□□□□□ -1.89
SMB1YER029C STE12P13574 688 aa3.22□□□□□ -1.89
SMB1YER029C YMC1P32331 307 aa3.22□□□□□ -1.89
SMB1YER029C EUG1P32474 517 aa3.22□□□□□ -1.89
SMB1YER029C EHT1P38295 451 aa3.22□□□□□ -1.89
SMB1YER029C PMC1P38929 1173 aaPredicted RBP3.22□□□□□ -1.89
SMB1YER029C YEN1P40028 759 aa3.22□□□□□ -1.89
SMB1YER029C SPC98P53540 846 aa3.22□□□□□ -1.89
SMB1YER029C EFR3Q03653 782 aaKnown RBP3.22□□□□□ -1.89
SMB1YER029C ARG7Q04728 441 aa3.22□□□□□ -1.89
SMB1YER029C ARR3Q06598 404 aa3.22□□□□□ -1.89
SMB1YER029C YCG1Q06680 1035 aa3.22□□□□□ -1.89
SMB1YER029C HOP1P20050 605 aa3.21□□□□□ -1.9
SMB1YER029C ENP1P38333 483 aaKnown RBP3.21□□□□□ -1.9
SMB1YER029C YHR033WP38690 423 aa3.21□□□□□ -1.9
SMB1YER029C IRC5P43610 853 aa3.21□□□□□ -1.9
SMB1YER029C ENP2P48234 707 aaKnown RBP3.21□□□□□ -1.9
SMB1YER029C RNR4P49723 345 aaKnown RBP3.21□□□□□ -1.9
SMB1YER029C YGL117WP53133 265 aa3.21□□□□□ -1.9
SMB1YER029C SKY1Q03656 742 aa3.21□□□□□ -1.9
SMB1YER029C NGL1Q08213 363 aaKnown RBP3.21□□□□□ -1.9
SMB1YER029C RMA1P36001 430 aaKnown RBP3.2□□□□□ -1.9
SMB1YER029C PPE1P38796 400 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms