RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 MET13P53128 600 aa3.51□□□□□ -1.85
snR42snR42 CDC55Q00362 526 aa3.51□□□□□ -1.85
snR42snR42 VPS20Q04272 221 aa3.51□□□□□ -1.85
snR42snR42 COQ9Q05779 260 aa3.51□□□□□ -1.85
snR42snR42 ADY4Q05955 493 aa3.51□□□□□ -1.85
snR42snR42 RSC58Q07979 502 aa3.51□□□□□ -1.85
snR42snR42 NBA1Q08229 501 aaKnown RBP3.51□□□□□ -1.85
snR42snR42 CPA2P03965 1118 aaKnown RBP3.5□□□□□ -1.85
snR42snR42 HXK1P04806 485 aaKnown RBP3.5□□□□□ -1.85
snR42snR42 TCP1P12612 559 aaKnown RBP3.5□□□□□ -1.85
snR42snR42 PGI1P12709 554 aaKnown RBP3.5□□□□□ -1.85
snR42snR42 SSD1P24276 1250 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
snR42snR42 PUF4P25339 888 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
snR42snR42 RPC53P25441 422 aa3.5□□□□□ -1.85
snR42snR42 URK1P27515 501 aa3.5□□□□□ -1.85
snR42snR42 CSE2P33308 149 aa3.5□□□□□ -1.85
snR42snR42 VPS35P34110 944 aa3.5□□□□□ -1.85
snR42snR42 MNR2P35724 969 aa3.5□□□□□ -1.85
snR42snR42 PET10P36139 283 aa3.5□□□□□ -1.85
snR42snR42 SIP3P38717 1229 aa3.5□□□□□ -1.85
snR42snR42 YHR131CP38835 850 aa3.5□□□□□ -1.85
snR42snR42 FAF1P40546 346 aaPredicted RBP3.5□□□□□ -1.85
snR42snR42 OPT1P40897 799 aa3.5□□□□□ -1.85
snR42snR42 LAM5P43560 674 aa3.5□□□□□ -1.85
snR42snR42 UBA2P52488 636 aa3.5□□□□□ -1.85
snR42snR42 PNG1Q02890 363 aa3.5□□□□□ -1.85
snR42snR42 YLR455WQ06188 304 aa3.5□□□□□ -1.85
snR42snR42 MMR1Q06324 491 aa3.5□□□□□ -1.85
snR42snR42 DCS2Q12123 353 aa3.5□□□□□ -1.85
snR42snR42 PCD1Q12524 340 aa3.5□□□□□ -1.85
snR42snR42 YPR117WQ06116 2489 aa3.5□□□□□ -1.85
snR42snR42 ADE4P04046 510 aaKnown RBP3.49□□□□□ -1.85
snR42snR42 BIK1P11709 440 aa3.49□□□□□ -1.85
snR42snR42 TAF13P11747 167 aa3.49□□□□□ -1.85
snR42snR42 ALG1P16661 449 aa3.49□□□□□ -1.85
snR42snR42 PFK1P16861 987 aaKnown RBP3.49□□□□□ -1.85
snR42snR42 HCM1P25364 564 aa3.49□□□□□ -1.85
snR42snR42 ADK2P26364 225 aa3.49□□□□□ -1.85
snR42snR42 SKG6P32900 734 aaPredicted RBP3.49□□□□□ -1.85
snR42snR42 PRX1P34227 261 aaKnown RBP3.49□□□□□ -1.85
snR42snR42 MRPL7P36519 292 aa3.49□□□□□ -1.85
snR42snR42 RDH54P38086 958 aa3.49□□□□□ -1.85
snR42snR42 PPS1P38148 807 aa3.49□□□□□ -1.85
snR42snR42 MAL33P38157 468 aa3.49□□□□□ -1.85
snR42snR42 UBP13P38187 747 aa3.49□□□□□ -1.85
snR42snR42 VID24P38263 362 aa3.49□□□□□ -1.85
snR42snR42 YHL026CP38740 315 aa3.49□□□□□ -1.85
snR42snR42 BUD16P39988 312 aa3.49□□□□□ -1.85
snR42snR42 YJL045WP47052 634 aa3.49□□□□□ -1.85
snR42snR42 RTT102P53330 157 aa3.49□□□□□ -1.85
snR42snR42 TOF1P53840 1238 aa3.49□□□□□ -1.85
snR42snR42 YNL146WP53906 100 aa3.49□□□□□ -1.85
snR42snR42 ROD1Q02805 837 aa3.49□□□□□ -1.85
snR42snR42 CWC21Q03375 135 aaKnown RBP3.49□□□□□ -1.85
snR42snR42 UTP5Q04177 643 aaKnown RBP3.49□□□□□ -1.85
snR42snR42 LCD1Q04377 747 aa3.49□□□□□ -1.85
snR42snR42 PSR2Q07949 397 aa3.49□□□□□ -1.85
snR42snR42 IES4Q08561 116 aa3.49□□□□□ -1.85
snR42snR42 MNL2Q12205 849 aa3.49□□□□□ -1.85
snR42snR42 PTC5Q12511 572 aa3.49□□□□□ -1.85
snR42snR42 YDR034W-BQ6Q5X2 51 aa3.49□□□□□ -1.85
snR42snR42 SCP160P06105 1222 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
snR42snR42 YEL076C-AP0CX16 216 aa3.48□□□□□ -1.85
snR42snR42 YLR464WP0CX17 216 aa3.48□□□□□ -1.85
snR42snR42 CKA2P19454 339 aa3.48□□□□□ -1.85
snR42snR42 ADE2P21264 571 aaKnown RBP3.48□□□□□ -1.85
snR42snR42 STE11P23561 717 aa3.48□□□□□ -1.85
snR42snR42 PRP22P24384 1145 aaKnown RBP3.48□□□□□ -1.85
snR42snR42 SYN8P31377 255 aa3.48□□□□□ -1.85
snR42snR42 SEC21P32074 935 aaKnown RBP3.48□□□□□ -1.85
snR42snR42 TMT1P32643 299 aa3.48□□□□□ -1.85
snR42snR42 YSC84P32793 468 aa3.48□□□□□ -1.85
snR42snR42 COT1P32798 439 aa3.48□□□□□ -1.85
snR42snR42 CCL1P37366 393 aa3.48□□□□□ -1.85
snR42snR42 SLX1P38324 304 aa3.48□□□□□ -1.85
snR42snR42 PCM1P38628 557 aaKnown RBP3.48□□□□□ -1.85
snR42snR42 ERC1P38767 581 aa3.48□□□□□ -1.85
snR42snR42 YEL076CP39971 216 aa3.48□□□□□ -1.85
snR42snR42 MMF1P40185 145 aaKnown RBP3.48□□□□□ -1.85
snR42snR42 SCD6P45978 349 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
snR42snR42 NPA3P47122 385 aa3.48□□□□□ -1.85
snR42snR42 YGR153WP48238 217 aa3.48□□□□□ -1.85
snR42snR42 MON1P53129 644 aa3.48□□□□□ -1.85
snR42snR42 CUL3P53202 744 aa3.48□□□□□ -1.85
snR42snR42 NOG1Q02892 647 aaKnown RBP3.48□□□□□ -1.85
snR42snR42 COG8Q04632 607 aa3.48□□□□□ -1.85
snR42snR42 FUS2Q05670 677 aa3.48□□□□□ -1.85
snR42snR42 SHS1Q07657 551 aa3.48□□□□□ -1.85
snR42snR42 YPL150WQ12152 901 aa3.48□□□□□ -1.85
snR42snR42 YOR022CQ12204 715 aa3.48□□□□□ -1.85
snR42snR42 CYC1P00044 109 aaPredicted RBP3.47□□□□□ -1.85
snR42snR42 HIS4P00815 799 aaKnown RBP3.47□□□□□ -1.85
snR42snR42 CIT2P08679 460 aa3.47□□□□□ -1.85
snR42snR42 POL3P15436 1097 aa3.47□□□□□ -1.85
snR42snR42 RSA4P25382 515 aaKnown RBP3.47□□□□□ -1.85
snR42snR42 RDS1P25611 832 aa3.47□□□□□ -1.85
snR42snR42 CDC15P27636 974 aa3.47□□□□□ -1.85
snR42snR42 PRR1P28708 518 aa3.47□□□□□ -1.85
snR42snR42 PMI40P29952 429 aaKnown RBP3.47□□□□□ -1.85
snR42snR42 DPH2P32461 534 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms