RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C POM34Q12445 299 aa2.15□□□□□ -2.07
NIP100YPL174C SIR3P06701 978 aa2.14□□□□□ -2.07
NIP100YPL174C THI6P41835 540 aa2.14□□□□□ -2.07
NIP100YPL174C PMT6P42934 759 aa2.14□□□□□ -2.07
NIP100YPL174C MPS3P47069 682 aa2.14□□□□□ -2.07
NIP100YPL174C MFM1Q02783 413 aa2.14□□□□□ -2.07
NIP100YPL174C UTP14Q04500 899 aaKnown RBP2.14□□□□□ -2.07
NIP100YPL174C THI7Q05998 598 aa2.14□□□□□ -2.07
NIP100YPL174C ORM2Q06144 216 aa2.14□□□□□ -2.07
NIP100YPL174C FRS1P15624 595 aaKnown RBP2.14□□□□□ -2.07
NIP100YPL174C NUP1P20676 1076 aa2.14□□□□□ -2.07
NIP100YPL174C IMG2P25642 146 aaPredicted RBP2.14□□□□□ -2.07
NIP100YPL174C BIT2P38346 545 aa2.14□□□□□ -2.07
NIP100YPL174C PMC1P38929 1173 aaPredicted RBP2.14□□□□□ -2.07
NIP100YPL174C RFX1P48743 811 aa2.14□□□□□ -2.07
NIP100YPL174C FHN1P53279 174 aa2.14□□□□□ -2.07
NIP100YPL174C BRE5P53741 515 aaKnown RBP2.14□□□□□ -2.07
NIP100YPL174C NGL2Q03264 515 aaKnown RBP2.14□□□□□ -2.07
NIP100YPL174C TRS23Q03784 219 aa2.14□□□□□ -2.07
NIP100YPL174C ARO10Q06408 635 aa2.14□□□□□ -2.07
NIP100YPL174C VPS36Q06696 566 aa2.14□□□□□ -2.07
NIP100YPL174C ERG11P10614 530 aa2.13□□□□□ -2.07
NIP100YPL174C PET127P32606 800 aa2.13□□□□□ -2.07
NIP100YPL174C YHR097CP38809 366 aaKnown RBP2.13□□□□□ -2.07
NIP100YPL174C PXA1P41909 870 aa2.13□□□□□ -2.07
NIP100YPL174C CCT7P42943 550 aaKnown RBP2.13□□□□□ -2.07
NIP100YPL174C SPO1P53541 631 aa2.13□□□□□ -2.07
NIP100YPL174C PTA1Q01329 785 aaPredicted RBP2.13□□□□□ -2.07
NIP100YPL174C LEE1Q02799 301 aaKnown RBP2.13□□□□□ -2.07
NIP100YPL174C LAM4P38800 1345 aa2.13□□□□□ -2.07
NIP100YPL174C PTP1P25044 335 aa2.13□□□□□ -2.07
NIP100YPL174C SAT4P25333 603 aaKnown RBP2.13□□□□□ -2.07
NIP100YPL174C MRPL9P31334 269 aa2.13□□□□□ -2.07
NIP100YPL174C YHR033WP38690 423 aa2.13□□□□□ -2.07
NIP100YPL174C PPE1P38796 400 aa2.13□□□□□ -2.07
NIP100YPL174C NMD2P38798 1089 aaKnown RBP2.13□□□□□ -2.07
NIP100YPL174C RET2P43621 546 aa2.13□□□□□ -2.07
NIP100YPL174C DIP5P53388 608 aa2.13□□□□□ -2.07
NIP100YPL174C ARP4P80428 489 aa2.13□□□□□ -2.07
NIP100YPL174C THI22Q06490 572 aa2.13□□□□□ -2.07
NIP100YPL174C AFT2Q08957 416 aa2.13□□□□□ -2.07
NIP100YPL174C SUT2Q12286 268 aa2.13□□□□□ -2.07
NIP100YPL174C TPK2P06245 380 aa2.12□□□□□ -2.07
NIP100YPL174C ADE5,7P07244 802 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C MDM10P18409 493 aa2.12□□□□□ -2.07
NIP100YPL174C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
NIP100YPL174C SEC65P29478 273 aa2.12□□□□□ -2.07
NIP100YPL174C ELF1P36053 145 aa2.12□□□□□ -2.07
NIP100YPL174C SET3P36124 751 aa2.12□□□□□ -2.07
NIP100YPL174C TYS1P36421 394 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C PIH1P38768 344 aa2.12□□□□□ -2.07
NIP100YPL174C SSZ1P38788 538 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C NUG1P40010 520 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C UFO1Q04511 668 aa2.12□□□□□ -2.07
NIP100YPL174C HOF1Q05080 669 aa2.12□□□□□ -2.07
NIP100YPL174C YPL216WQ08964 1102 aa2.12□□□□□ -2.07
NIP100YPL174C FAP7Q12055 197 aaPredicted RBP2.12□□□□□ -2.07
NIP100YPL174C NDJ1Q12366 352 aa2.12□□□□□ -2.07
NIP100YPL174C YNL162W-AQ3E7A8 72 aa2.12□□□□□ -2.07
NIP100YPL174C VPS34P22543 875 aa2.12□□□□□ -2.07
NIP100YPL174C MIH1P23748 554 aa2.12□□□□□ -2.07
NIP100YPL174C AKL1P38080 1108 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C CTP1P38152 299 aa2.12□□□□□ -2.07
NIP100YPL174C CKB2P38930 258 aa2.12□□□□□ -2.07
NIP100YPL174C YJR039WP47107 1121 aa2.12□□□□□ -2.07
NIP100YPL174C YJR096WP47137 282 aa2.12□□□□□ -2.07
NIP100YPL174C SQS1P53866 767 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C DAK1P54838 584 aaKnown RBP2.12□□□□□ -2.07
NIP100YPL174C SEC5P89102 971 aa2.12□□□□□ -2.07
NIP100YPL174C AIM41Q12032 185 aa2.12□□□□□ -2.07
NIP100YPL174C RKI1Q12189 258 aa2.12□□□□□ -2.07
NIP100YPL174C TAF3Q12297 353 aa2.12□□□□□ -2.07
NIP100YPL174C RPS17AP02407 136 aaKnown RBP2.11□□□□□ -2.07
NIP100YPL174C RPS17BP14127 136 aaKnown RBP2.11□□□□□ -2.07
NIP100YPL174C TMN3P40071 706 aa2.11□□□□□ -2.07
NIP100YPL174C PMT3P47190 753 aa2.11□□□□□ -2.07
NIP100YPL174C YLR407WQ06070 228 aa2.11□□□□□ -2.07
NIP100YPL174C THI73Q07904 523 aa2.11□□□□□ -2.07
NIP100YPL174C BMS1Q08965 1183 aaKnown RBP2.11□□□□□ -2.07
NIP100YPL174C RPL8AP17076 256 aaKnown RBP2.11□□□□□ -2.07
NIP100YPL174C DGR2P32330 852 aa2.11□□□□□ -2.07
NIP100YPL174C YDR179W-AQ03983 463 aa2.11□□□□□ -2.07
NIP100YPL174C YFT2Q06676 274 aa2.11□□□□□ -2.07
NIP100YPL174C DCS2Q12123 353 aa2.11□□□□□ -2.07
NIP100YPL174C YKU70P32807 602 aa2.1□□□□□ -2.07
NIP100YPL174C BIT61P47041 543 aa2.1□□□□□ -2.07
NIP100YPL174C ASN1P49089 572 aaKnown RBP2.1□□□□□ -2.07
NIP100YPL174C GLO1P50107 326 aa2.1□□□□□ -2.07
NIP100YPL174C MDR1P53258 950 aa2.1□□□□□ -2.07
NIP100YPL174C DNM1P54861 757 aa2.1□□□□□ -2.07
NIP100YPL174C HFD1Q04458 532 aa2.1□□□□□ -2.07
NIP100YPL174C MRI1Q06489 411 aaKnown RBP2.1□□□□□ -2.07
NIP100YPL174C FPR3P38911 411 aaKnown RBP2.1□□□□□ -2.07
NIP100YPL174C RNR4P49723 345 aaKnown RBP2.1□□□□□ -2.07
NIP100YPL174C RIM13Q03792 727 aa2.1□□□□□ -2.07
NIP100YPL174C STP4Q07351 490 aa2.1□□□□□ -2.07
NIP100YPL174C SEC12P11655 471 aa2.09□□□□□ -2.07
NIP100YPL174C EMP70P32802 667 aa2.09□□□□□ -2.07
NIP100YPL174C UGP1P32861 499 aaKnown RBP2.09□□□□□ -2.07
NIP100YPL174C XBP1P40489 647 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 833.6 ms