RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SUN4P53616 420 aa2.62□□□□□ -1.99
SGD1YLR336C RNT1Q02555 471 aa2.62□□□□□ -1.99
SGD1YLR336C PHM6Q05637 104 aa2.62□□□□□ -1.99
SGD1YLR336C YOL073CQ08232 322 aa2.62□□□□□ -1.99
SGD1YLR336C TMA7Q3E764 64 aaKnown RBP2.62□□□□□ -1.99
SGD1YLR336C KAR1P11927 433 aa2.61□□□□□ -1.99
SGD1YLR336C TRM2P33753 639 aa2.61□□□□□ -1.99
SGD1YLR336C PPS1P38148 807 aa2.61□□□□□ -1.99
SGD1YLR336C CCT3P39077 534 aaKnown RBP2.61□□□□□ -1.99
SGD1YLR336C YOR378WQ08902 515 aa2.61□□□□□ -1.99
SGD1YLR336C SLX4Q12098 748 aa2.61□□□□□ -1.99
SGD1YLR336C POM34Q12445 299 aa2.61□□□□□ -1.99
SGD1YLR336C PPR1P07272 904 aaPredicted RBP2.61□□□□□ -1.99
SGD1YLR336C ERG20P08524 352 aaKnown RBP2.61□□□□□ -1.99
SGD1YLR336C PRE4P30657 266 aa2.61□□□□□ -1.99
SGD1YLR336C MVD1P32377 396 aaKnown RBP2.61□□□□□ -1.99
SGD1YLR336C HIS7P33734 552 aaKnown RBP2.61□□□□□ -1.99
SGD1YLR336C SFB3P38810 929 aa2.61□□□□□ -1.99
SGD1YLR336C PEA2P40091 420 aa2.61□□□□□ -1.99
SGD1YLR336C PXA1P41909 870 aa2.61□□□□□ -1.99
SGD1YLR336C IRC5P43610 853 aa2.61□□□□□ -1.99
SGD1YLR336C PAN2P53010 1115 aaPredicted RBP2.61□□□□□ -1.99
SGD1YLR336C PEX15Q08215 383 aa2.61□□□□□ -1.99
SGD1YLR336C CWC2Q12046 339 aaPredicted RBP2.61□□□□□ -1.99
SGD1YLR336C ACO1P19414 778 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SGD1YLR336C BCS1P32839 456 aa2.6□□□□□ -1.99
SGD1YLR336C CDS1P38221 457 aa2.6□□□□□ -1.99
SGD1YLR336C TAF4P50105 388 aa2.6□□□□□ -1.99
SGD1YLR336C YMR206WQ03695 313 aa2.6□□□□□ -1.99
SGD1YLR336C VBA4Q04602 768 aaKnown RBP2.6□□□□□ -1.99
SGD1YLR336C OMS1Q06668 471 aa2.6□□□□□ -1.99
SGD1YLR336C FEN2P25621 512 aaKnown RBP2.6□□□□□ -1.99
SGD1YLR336C DGR2P32330 852 aa2.6□□□□□ -1.99
SGD1YLR336C MTC7P32633 139 aa2.6□□□□□ -1.99
SGD1YLR336C YKL222CP35995 705 aa2.6□□□□□ -1.99
SGD1YLR336C EMP65P40085 556 aa2.6□□□□□ -1.99
SGD1YLR336C DIA2Q08496 732 aaPredicted RBP2.6□□□□□ -1.99
SGD1YLR336C RPS9BP05755 195 aaKnown RBP2.59□□□□□ -1.99
SGD1YLR336C SIR3P06701 978 aa2.59□□□□□ -1.99
SGD1YLR336C YEL076C-AP0CX16 216 aa2.59□□□□□ -1.99
SGD1YLR336C YLR464WP0CX17 216 aa2.59□□□□□ -1.99
SGD1YLR336C SST2P11972 698 aaKnown RBP2.59□□□□□ -1.99
SGD1YLR336C SRP68P38687 599 aaKnown RBP2.59□□□□□ -1.99
SGD1YLR336C CRG1P38892 291 aaRIP-Chip data2.59□□□□□ -1.99 RIP-Chip
SGD1YLR336C YEL076CP39971 216 aa2.59□□□□□ -1.99
SGD1YLR336C FMP52P40008 231 aa2.59□□□□□ -1.99
SGD1YLR336C YIL077CP40508 320 aa2.59□□□□□ -1.99
SGD1YLR336C RFX1P48743 811 aa2.59□□□□□ -1.99
SGD1YLR336C SLI1P53304 468 aa2.59□□□□□ -1.99
SGD1YLR336C MUK1Q02866 612 aa2.59□□□□□ -1.99
SGD1YLR336C MLH3Q12083 715 aa2.59□□□□□ -1.99
SGD1YLR336C YKL033W-AQ86ZR7 236 aa2.59□□□□□ -1.99
SGD1YLR336C TUB2P02557 457 aaKnown RBP2.59□□□□□ -2
SGD1YLR336C MSS1P32559 526 aaPredicted RBP2.59□□□□□ -2
SGD1YLR336C NIC96P34077 839 aa2.59□□□□□ -2
SGD1YLR336C PHO11P35842 467 aa2.59□□□□□ -2
SGD1YLR336C COS111P38308 924 aa2.59□□□□□ -2
SGD1YLR336C YHR033WP38690 423 aa2.59□□□□□ -2
SGD1YLR336C PHO12P38693 467 aa2.59□□□□□ -2
SGD1YLR336C AIM21P40563 679 aa2.59□□□□□ -2
SGD1YLR336C MSE1P48525 536 aa2.59□□□□□ -2
SGD1YLR336C FHN1P53279 174 aa2.59□□□□□ -2
SGD1YLR336C YFT2Q06676 274 aa2.59□□□□□ -2
SGD1YLR336C PUS9Q12069 462 aa2.59□□□□□ -2
SGD1YLR336C ZRT2Q12436 422 aa2.59□□□□□ -2
SGD1YLR336C GAL1P04385 528 aa2.58□□□□□ -2
SGD1YLR336C KIN82P25341 720 aa2.58□□□□□ -2
SGD1YLR336C RMA1P36001 430 aaKnown RBP2.58□□□□□ -2
SGD1YLR336C REV7P38927 245 aa2.58□□□□□ -2
SGD1YLR336C FTR1P40088 404 aa2.58□□□□□ -2
SGD1YLR336C PRM2P40534 656 aa2.58□□□□□ -2
SGD1YLR336C DAS1P47005 663 aa2.58□□□□□ -2
SGD1YLR336C YDL183CP48569 320 aa2.58□□□□□ -2
SGD1YLR336C MET14Q02196 202 aa2.58□□□□□ -2
SGD1YLR336C NSE5Q03718 556 aa2.58□□□□□ -2
SGD1YLR336C RTK1Q12100 620 aaPredicted RBP2.58□□□□□ -2
SGD1YLR336C CHS7P38843 316 aa2.58□□□□□ -2
SGD1YLR336C CEG1Q01159 459 aaPredicted RBP2.58□□□□□ -2
SGD1YLR336C MTD1Q02046 320 aaKnown RBP2.58□□□□□ -2
SGD1YLR336C TIM50Q02776 476 aa2.58□□□□□ -2
SGD1YLR336C CHS5Q12114 671 aaKnown RBP2.58□□□□□ -2
SGD1YLR336C TUP1P16649 713 aa2.57□□□□□ -2
SGD1YLR336C KCC4P25389 1037 aa2.57□□□□□ -2
SGD1YLR336C UBS1P38290 277 aa2.57□□□□□ -2
SGD1YLR336C YIL092WP40497 633 aa2.57□□□□□ -2
SGD1YLR336C TEL2P53038 688 aa2.57□□□□□ -2
SGD1YLR336C ATP4P05626 244 aa2.57□□□□□ -2
SGD1YLR336C THR1P17423 357 aaKnown RBP2.57□□□□□ -2
SGD1YLR336C PRP22P24384 1145 aaKnown RBP2.57□□□□□ -2
SGD1YLR336C SET3P36124 751 aa2.57□□□□□ -2
SGD1YLR336C EHT1P38295 451 aa2.57□□□□□ -2
SGD1YLR336C STL1P39932 569 aa2.57□□□□□ -2
SGD1YLR336C KHA1P40309 873 aa2.57□□□□□ -2
SGD1YLR336C TPM2P40414 161 aa2.57□□□□□ -2
SGD1YLR336C MAD2P40958 196 aa2.57□□□□□ -2
SGD1YLR336C MPS3P47069 682 aa2.57□□□□□ -2
SGD1YLR336C MNT2P53059 558 aa2.57□□□□□ -2
SGD1YLR336C RTS3P53289 263 aa2.57□□□□□ -2
SGD1YLR336C PPN1Q04119 674 aa2.57□□□□□ -2
SGD1YLR336C PIF1P07271 859 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 86.1 ms