RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W EMI2Q04409 500 aaKnown RBP10.52□□□□□ -0.73
SHH4YLR164W MDM38Q08179 573 aa10.52□□□□□ -0.73
SHH4YLR164W AIM41Q12032 185 aa10.52□□□□□ -0.73
SHH4YLR164W ZRT2Q12436 422 aa10.52□□□□□ -0.73
SHH4YLR164W MSD1P15179 658 aaKnown RBP10.51□□□□□ -0.73
SHH4YLR164W RPO26P20435 155 aa10.51□□□□□ -0.73
SHH4YLR164W PUF4P25339 888 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73 RIP-Chip
SHH4YLR164W LRE1P25579 583 aaKnown RBP10.51□□□□□ -0.73
SHH4YLR164W GCD6P32501 712 aaKnown RBP10.51□□□□□ -0.73
SHH4YLR164W PEP7P32609 515 aa10.51□□□□□ -0.73
SHH4YLR164W APM2P38700 605 aa10.51□□□□□ -0.73
SHH4YLR164W NMD3P38861 518 aaKnown RBP10.51□□□□□ -0.73
SHH4YLR164W END3P39013 349 aa10.51□□□□□ -0.73
SHH4YLR164W CCT4P39078 528 aaKnown RBP10.51□□□□□ -0.73
SHH4YLR164W AVT2P39981 480 aa10.51□□□□□ -0.73
SHH4YLR164W KHA1P40309 873 aa10.51□□□□□ -0.73
SHH4YLR164W PFD1P46988 109 aa10.51□□□□□ -0.73
SHH4YLR164W RPC17P47076 161 aa10.51□□□□□ -0.73
SHH4YLR164W YMR187CQ03236 431 aa10.51□□□□□ -0.73
SHH4YLR164W PUF3Q07807 879 aaKnown RBP RIP-Chip data10.51□□□□□ -0.73not detected
SHH4YLR164W RCL1Q08096 367 aaPredicted RBP10.51□□□□□ -0.73
SHH4YLR164W YRR1Q12172 810 aa10.51□□□□□ -0.73
SHH4YLR164W PUT4P15380 627 aa10.5□□□□□ -0.73
SHH4YLR164W PRP9P19736 530 aaKnown RBP10.5□□□□□ -0.73
SHH4YLR164W SEC1P30619 724 aaKnown RBP10.5□□□□□ -0.73
SHH4YLR164W GPI10P30777 616 aa10.5□□□□□ -0.73
SHH4YLR164W SRB2P34162 210 aa10.5□□□□□ -0.73
SHH4YLR164W WHI3P34761 661 aaKnown RBP10.5□□□□□ -0.73
SHH4YLR164W MRPL7P36519 292 aa10.5□□□□□ -0.73
SHH4YLR164W YEL023CP39992 682 aa10.5□□□□□ -0.73
SHH4YLR164W MAD1P40957 749 aa10.5□□□□□ -0.73
SHH4YLR164W YNL320WP42840 284 aa10.5□□□□□ -0.73
SHH4YLR164W YFL052WP43551 465 aa10.5□□□□□ -0.73
SHH4YLR164W NMD5P46970 1048 aa10.5□□□□□ -0.73
SHH4YLR164W ALY2P47029 1046 aa10.5□□□□□ -0.73
SHH4YLR164W YPL062WQ02781 134 aa10.5□□□□□ -0.73
SHH4YLR164W SKY1Q03656 742 aa10.5□□□□□ -0.73
SHH4YLR164W IVY1Q04934 453 aa10.5□□□□□ -0.73
SHH4YLR164W AIM39Q08223 395 aa10.5□□□□□ -0.73
SHH4YLR164W SAM3Q08986 587 aa10.5□□□□□ -0.73
SHH4YLR164W APM4Q99186 491 aa10.5□□□□□ -0.73
SHH4YLR164W SFL1P20134 766 aa10.49□□□□□ -0.73
SHH4YLR164W HMT1P38074 348 aa10.49□□□□□ -0.73
SHH4YLR164W PBP2P38151 413 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
SHH4YLR164W MMS21P38632 267 aa10.49□□□□□ -0.73
SHH4YLR164W RIM4P38741 713 aa10.49□□□□□ -0.73
SHH4YLR164W PMC1P38929 1173 aaPredicted RBP10.49□□□□□ -0.73
SHH4YLR164W ATG36P46983 293 aa10.49□□□□□ -0.73
SHH4YLR164W ERV41Q04651 352 aa10.49□□□□□ -0.73
SHH4YLR164W DDC1Q08949 612 aa10.49□□□□□ -0.73
SHH4YLR164W GPM2Q12008 311 aa10.49□□□□□ -0.73
SHH4YLR164W CNS1P33313 385 aa10.48□□□□□ -0.73
SHH4YLR164W TKL2P33315 681 aa10.48□□□□□ -0.73
SHH4YLR164W KDX1P36005 433 aa10.48□□□□□ -0.73
SHH4YLR164W APN2P38207 520 aa10.48□□□□□ -0.73
SHH4YLR164W PCM1P38628 557 aaKnown RBP10.48□□□□□ -0.73
SHH4YLR164W JHD1P40034 492 aa10.48□□□□□ -0.73
SHH4YLR164W PRK1P40494 810 aa10.48□□□□□ -0.73
SHH4YLR164W YIL054WP40524 105 aa10.48□□□□□ -0.73
SHH4YLR164W MIC19P43594 170 aa10.48□□□□□ -0.73
SHH4YLR164W YJL045WP47052 634 aa10.48□□□□□ -0.73
SHH4YLR164W MTG1Q03151 367 aaPredicted RBP10.48□□□□□ -0.73
SHH4YLR164W SXM1Q04175 944 aaKnown RBP10.48□□□□□ -0.73
SHH4YLR164W PRM6Q04705 352 aa10.48□□□□□ -0.73
SHH4YLR164W NOP6Q07623 225 aaKnown RBP10.48□□□□□ -0.73
SHH4YLR164W HRT3Q12347 344 aa10.48□□□□□ -0.73
SHH4YLR164W NOP58Q12499 511 aaKnown RBP10.48□□□□□ -0.73
SHH4YLR164W YLR422WQ06409 1932 aa10.48□□□□□ -0.73
SHH4YLR164W UBR2Q07963 1872 aa10.47□□□□□ -0.73
SHH4YLR164W HXT3P32466 567 aaKnown RBP10.47□□□□□ -0.73
SHH4YLR164W RRP1P35178 278 aaPredicted RBP10.47□□□□□ -0.73
SHH4YLR164W SHE3P38272 425 aaKnown RBP10.47□□□□□ -0.73
SHH4YLR164W HSL7P38274 827 aa10.47□□□□□ -0.73
SHH4YLR164W SWC5P38326 303 aa10.47□□□□□ -0.73
SHH4YLR164W MSG5P38590 489 aa10.47□□□□□ -0.73
SHH4YLR164W INP52P50942 1183 aa10.47□□□□□ -0.73
SHH4YLR164W NUT1P53114 1132 aa10.47□□□□□ -0.73
SHH4YLR164W CDC55Q00362 526 aa10.47□□□□□ -0.73
SHH4YLR164W KAP95Q06142 861 aaKnown RBP10.47□□□□□ -0.73
SHH4YLR164W YCR015CP25616 317 aa10.46□□□□□ -0.73
SHH4YLR164W MAC1P35192 417 aa10.46□□□□□ -0.73
SHH4YLR164W FMP10P40098 244 aa10.46□□□□□ -0.73
SHH4YLR164W FAF1P40546 346 aaPredicted RBP10.46□□□□□ -0.73
SHH4YLR164W YIR016WP40572 265 aa10.46□□□□□ -0.73
SHH4YLR164W CDC1P40986 491 aa10.46□□□□□ -0.73
SHH4YLR164W RSM26P47141 266 aa10.46□□□□□ -0.73
SHH4YLR164W YGR283CP53336 341 aaPredicted RBP10.46□□□□□ -0.73
SHH4YLR164W YNL040WP53960 456 aaPredicted RBP10.46□□□□□ -0.73
SHH4YLR164W INA17Q02888 182 aa10.46□□□□□ -0.73
SHH4YLR164W TAF9Q05027 157 aa10.46□□□□□ -0.73
SHH4YLR164W ACM1Q08981 209 aa10.46□□□□□ -0.73
SHH4YLR164W NUR1Q12066 484 aa10.46□□□□□ -0.73
SHH4YLR164W TUB3P09734 445 aaKnown RBP10.45□□□□□ -0.74
SHH4YLR164W AEP2P22136 580 aa10.45□□□□□ -0.74
SHH4YLR164W YBR053CP38235 358 aa10.45□□□□□ -0.74
SHH4YLR164W FLC2P39719 783 aa10.45□□□□□ -0.74
SHH4YLR164W SAW1P39735 261 aa10.45□□□□□ -0.74
SHH4YLR164W TMA108P40462 946 aa10.45□□□□□ -0.74
SHH4YLR164W RSC8P43609 557 aaKnown RBP10.45□□□□□ -0.74
SHH4YLR164W ADA2Q02336 434 aa10.45□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms