RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W KGD2P19262 463 aaPredicted RBP2.62□□□□□ -1.99
SWR1YDR334W RBK1P25332 333 aa2.62□□□□□ -1.99
SWR1YDR334W YKL151CP36059 337 aa2.62□□□□□ -1.99
SWR1YDR334W HSL7P38274 827 aa2.62□□□□□ -1.99
SWR1YDR334W SAF1P38352 637 aa2.62□□□□□ -1.99
SWR1YDR334W EFM1P38732 585 aa2.62□□□□□ -1.99
SWR1YDR334W MNN1P39106 762 aa2.62□□□□□ -1.99
SWR1YDR334W TED1P40533 473 aa2.62□□□□□ -1.99
SWR1YDR334W TFG2P41896 400 aaPredicted RBP2.62□□□□□ -1.99
SWR1YDR334W YAR1P46683 200 aa2.62□□□□□ -1.99
SWR1YDR334W YJL181WP46987 611 aa2.62□□□□□ -1.99
SWR1YDR334W NET1P47035 1189 aa2.62□□□□□ -1.99
SWR1YDR334W RTA1P53047 317 aa2.62□□□□□ -1.99
SWR1YDR334W COG6P53959 839 aa2.62□□□□□ -1.99
SWR1YDR334W USA1Q03714 838 aa2.62□□□□□ -1.99
SWR1YDR334W COG4Q06096 861 aa2.62□□□□□ -1.99
SWR1YDR334W YSH1Q06224 779 aaPredicted RBP2.62□□□□□ -1.99
SWR1YDR334W YPL191CQ08930 360 aa2.62□□□□□ -1.99
SWR1YDR334W CHS5Q12114 671 aaKnown RBP2.62□□□□□ -1.99
SWR1YDR334W RPL8AP17076 256 aaKnown RBP2.62□□□□□ -1.99
SWR1YDR334W PRE10P21242 288 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
SWR1YDR334W RAD16P31244 790 aa2.62□□□□□ -1.99
SWR1YDR334W ABD1P32783 436 aaPredicted RBP2.62□□□□□ -1.99
SWR1YDR334W PPG1P32838 368 aa2.62□□□□□ -1.99
SWR1YDR334W TIM23P32897 222 aa2.62□□□□□ -1.99
SWR1YDR334W REC104P33323 182 aa2.62□□□□□ -1.99
SWR1YDR334W RRM3P38766 723 aa2.62□□□□□ -1.99
SWR1YDR334W EFM5P53200 248 aaKnown RBP2.62□□□□□ -1.99
SWR1YDR334W RBA50Q04418 439 aa2.62□□□□□ -1.99
SWR1YDR334W RPS4AP0CX35 261 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W RPS4BP0CX36 261 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W NIP1P32497 812 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W YKR073CP36153 106 aa2.61□□□□□ -1.99
SWR1YDR334W UBP13P38187 747 aa2.61□□□□□ -1.99
SWR1YDR334W TSL1P38427 1098 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W PEX7P39108 375 aa2.61□□□□□ -1.99
SWR1YDR334W SEC9P40357 651 aa2.61□□□□□ -1.99
SWR1YDR334W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SWR1YDR334W SSN8P47821 323 aa2.61□□□□□ -1.99
SWR1YDR334W PEX14P53112 341 aa2.61□□□□□ -1.99
SWR1YDR334W INA17Q02888 182 aa2.61□□□□□ -1.99
SWR1YDR334W REH1Q06709 432 aa2.61□□□□□ -1.99
SWR1YDR334W NTG2Q08214 380 aa2.61□□□□□ -1.99
SWR1YDR334W NBA1Q08229 501 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W NCP1P16603 691 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W RAD53P22216 821 aa2.61□□□□□ -1.99
SWR1YDR334W LAM1P38851 1228 aa2.61□□□□□ -1.99
SWR1YDR334W TPM2P40414 161 aa2.61□□□□□ -1.99
SWR1YDR334W MKT1P40850 830 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W MSC2Q03455 724 aa2.61□□□□□ -1.99
SWR1YDR334W UBX2Q04228 584 aa2.61□□□□□ -1.99
SWR1YDR334W HRD3Q05787 833 aa2.61□□□□□ -1.99
SWR1YDR334W PRP4P20053 465 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W SNT1P25357 1226 aa2.61□□□□□ -1.99
SWR1YDR334W MLS1P30952 554 aa2.61□□□□□ -1.99
SWR1YDR334W RPT3P33298 428 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W TOM20P35180 183 aa2.61□□□□□ -1.99
SWR1YDR334W BLI1P35727 113 aa2.61□□□□□ -1.99
SWR1YDR334W BYE1P36106 594 aa2.61□□□□□ -1.99
SWR1YDR334W APT2P36973 181 aa2.61□□□□□ -1.99
SWR1YDR334W KTR4P38131 464 aa2.61□□□□□ -1.99
SWR1YDR334W MAL31P38156 614 aa2.61□□□□□ -1.99
SWR1YDR334W SPC72P39723 622 aa2.61□□□□□ -1.99
SWR1YDR334W GID8P40208 455 aa2.61□□□□□ -1.99
SWR1YDR334W URM1P40554 99 aaPredicted RBP2.61□□□□□ -1.99
SWR1YDR334W MMM1P41800 426 aa2.61□□□□□ -1.99
SWR1YDR334W SPO74P45819 413 aa2.61□□□□□ -1.99
SWR1YDR334W YJR142WP47173 342 aa2.61□□□□□ -1.99
SWR1YDR334W UPF3P48412 387 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W YNL247WP53852 767 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W RSC58Q07979 502 aa2.61□□□□□ -1.99
SWR1YDR334W YVC1Q12324 675 aa2.61□□□□□ -1.99
SWR1YDR334W NBL1Q3E7Y6 73 aa2.61□□□□□ -1.99
SWR1YDR334W DBP2P24783 546 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W RFC3P38629 340 aa2.61□□□□□ -1.99
SWR1YDR334W SIC1P38634 284 aa2.61□□□□□ -1.99
SWR1YDR334W GIC1P38785 314 aa2.61□□□□□ -1.99
SWR1YDR334W YNG2P38806 282 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W YAP1801P38856 637 aa2.61□□□□□ -1.99
SWR1YDR334W PUS4P48567 403 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W KIP3P53086 805 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W SPO1P53541 631 aa2.61□□□□□ -1.99
SWR1YDR334W ZDS2P54786 942 aa2.61□□□□□ -1.99
SWR1YDR334W YDR541CQ03049 344 aa2.61□□□□□ -1.99
SWR1YDR334W GPI17Q04080 534 aa2.61□□□□□ -1.99
SWR1YDR334W HEL2Q05580 639 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W YLR225CQ05948 407 aaKnown RBP2.61□□□□□ -1.99
SWR1YDR334W NDL1Q06568 189 aa2.61□□□□□ -1.99
SWR1YDR334W MED7Q08278 222 aa2.61□□□□□ -1.99
SWR1YDR334W SGT1Q08446 395 aa2.61□□□□□ -1.99
SWR1YDR334W ENV7Q12003 364 aa2.61□□□□□ -1.99
SWR1YDR334W YDR215CQ12240 137 aa2.61□□□□□ -1.99
SWR1YDR334W ARE1P25628 610 aa2.6□□□□□ -1.99
SWR1YDR334W MEI4P29467 408 aa2.6□□□□□ -1.99
SWR1YDR334W MYO3P36006 1272 aa2.6□□□□□ -1.99
SWR1YDR334W FUI1P38196 639 aa2.6□□□□□ -1.99
SWR1YDR334W OPT1P40897 799 aa2.6□□□□□ -1.99
SWR1YDR334W OYE3P41816 400 aaPredicted RBP2.6□□□□□ -1.99
SWR1YDR334W CTH1P47976 325 aa2.6□□□□□ -1.99
SWR1YDR334W YAP1802P53309 568 aa2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms