RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W BOP3P53958 396 aa3.69□□□□□ -1.82
NUP60YAR002W ORC4P54791 529 aa3.69□□□□□ -1.82
NUP60YAR002W SML1Q04964 104 aa3.69□□□□□ -1.82
NUP60YAR002W TDA5Q06417 326 aaKnown RBP3.69□□□□□ -1.82
NUP60YAR002W YOR059CQ08448 450 aaKnown RBP3.69□□□□□ -1.82
NUP60YAR002W TCO89Q08921 799 aa3.69□□□□□ -1.82
NUP60YAR002W PLP2Q12017 286 aa3.69□□□□□ -1.82
NUP60YAR002W RKM4Q12504 494 aa3.69□□□□□ -1.82
NUP60YAR002W PPR1P07272 904 aaPredicted RBP3.68□□□□□ -1.82
NUP60YAR002W SSB1P11484 613 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W DPB3P27344 201 aa3.68□□□□□ -1.82
NUP60YAR002W SBA1P28707 216 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W KIP1P28742 1111 aa3.68□□□□□ -1.82
NUP60YAR002W NAM7P30771 971 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W PGM1P33401 570 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W PHO88P38264 188 aaPredicted RBP3.68□□□□□ -1.82
NUP60YAR002W ACA1P39970 489 aa3.68□□□□□ -1.82
NUP60YAR002W SPF1P39986 1215 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W SSB2P40150 613 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W MPH1P40562 993 aa3.68□□□□□ -1.82
NUP60YAR002W NBP1P52919 319 aaPredicted RBP3.68□□□□□ -1.82
NUP60YAR002W MAL13P53338 473 aa3.68□□□□□ -1.82
NUP60YAR002W SEC5P89102 971 aa3.68□□□□□ -1.82
NUP60YAR002W TPP1Q03796 238 aa3.68□□□□□ -1.82
NUP60YAR002W RBA50Q04418 439 aa3.68□□□□□ -1.82
NUP60YAR002W VAC14Q06708 880 aa3.68□□□□□ -1.82
NUP60YAR002W YDL057WQ07379 328 aa3.68□□□□□ -1.82
NUP60YAR002W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
NUP60YAR002W MCA1Q08601 432 aa3.68□□□□□ -1.82
NUP60YAR002W PUS7Q08647 676 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W ARP6Q12509 438 aa3.68□□□□□ -1.82
NUP60YAR002W NOP14Q99207 810 aaKnown RBP3.68□□□□□ -1.82
NUP60YAR002W PHR1P05066 565 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
NUP60YAR002W TOM70P07213 617 aaKnown RBP3.67□□□□□ -1.82
NUP60YAR002W RAD18P10862 487 aa3.67□□□□□ -1.82
NUP60YAR002W CHS2P14180 963 aa3.67□□□□□ -1.82
NUP60YAR002W RAD57P25301 460 aa3.67□□□□□ -1.82
NUP60YAR002W CDC60P26637 1090 aaKnown RBP3.67□□□□□ -1.82
NUP60YAR002W APL1P27351 700 aa3.67□□□□□ -1.82
NUP60YAR002W MLS1P30952 554 aa3.67□□□□□ -1.82
NUP60YAR002W PIN4P34217 668 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
NUP60YAR002W RRP1P35178 278 aaPredicted RBP3.67□□□□□ -1.82
NUP60YAR002W OCA5P38738 679 aa3.67□□□□□ -1.82
NUP60YAR002W SMC2P38989 1170 aaKnown RBP3.67□□□□□ -1.82
NUP60YAR002W UBP5P39944 805 aa3.67□□□□□ -1.82
NUP60YAR002W BUD16P39988 312 aa3.67□□□□□ -1.82
NUP60YAR002W IES1P43579 692 aa3.67□□□□□ -1.82
NUP60YAR002W CCM1P48237 864 aaPredicted RBP3.67□□□□□ -1.82
NUP60YAR002W VID30P53076 958 aa3.67□□□□□ -1.82
NUP60YAR002W LIF1P53150 421 aa3.67□□□□□ -1.82
NUP60YAR002W SHE9Q04172 456 aa3.67□□□□□ -1.82
NUP60YAR002W RRB1Q04225 511 aaKnown RBP3.67□□□□□ -1.82
NUP60YAR002W YLR225CQ05948 407 aaKnown RBP3.67□□□□□ -1.82
NUP60YAR002W WHI4Q07655 649 aaKnown RBP3.67□□□□□ -1.82
NUP60YAR002W MED1Q12321 566 aa3.67□□□□□ -1.82
NUP60YAR002W CSR2Q12734 1121 aa3.67□□□□□ -1.82
NUP60YAR002W YLR278CQ05854 1341 aa3.67□□□□□ -1.82
NUP60YAR002W SRD1P09007 221 aa3.66□□□□□ -1.82
NUP60YAR002W CLN3P13365 580 aa3.66□□□□□ -1.82
NUP60YAR002W TUP1P16649 713 aa3.66□□□□□ -1.82
NUP60YAR002W CKI1P20485 582 aa3.66□□□□□ -1.82
NUP60YAR002W MSB1P21339 1137 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W DAL7P21826 554 aa3.66□□□□□ -1.82
NUP60YAR002W PRP22P24384 1145 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W PUF4P25339 888 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
NUP60YAR002W HXT1P32465 570 aa3.66□□□□□ -1.82
NUP60YAR002W SRB4P32569 687 aa3.66□□□□□ -1.82
NUP60YAR002W ABD1P32783 436 aaPredicted RBP3.66□□□□□ -1.82
NUP60YAR002W XRS2P33301 854 aa3.66□□□□□ -1.82
NUP60YAR002W YKL107WP34251 309 aa3.66□□□□□ -1.82
NUP60YAR002W MOT2P34909 587 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W YKL069WP36088 180 aa3.66□□□□□ -1.82
NUP60YAR002W KAE1P36132 386 aa3.66□□□□□ -1.82
NUP60YAR002W GPD2P41911 440 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W SMC3P47037 1230 aa3.66□□□□□ -1.82
NUP60YAR002W YJL045WP47052 634 aa3.66□□□□□ -1.82
NUP60YAR002W CCT8P47079 568 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W DIP5P53388 608 aa3.66□□□□□ -1.82
NUP60YAR002W CNM67P53865 581 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W NGL3Q03210 505 aa3.66□□□□□ -1.82
NUP60YAR002W YML037CQ03703 340 aa3.66□□□□□ -1.82
NUP60YAR002W TMA64Q04600 565 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W SOV1Q04748 898 aa3.66□□□□□ -1.82
NUP60YAR002W OPY2Q06810 360 aa3.66□□□□□ -1.82
NUP60YAR002W YPR078CQ06813 372 aa3.66□□□□□ -1.82
NUP60YAR002W YPL277CQ08989 487 aa3.66□□□□□ -1.82
NUP60YAR002W GNT1Q12096 491 aa3.66□□□□□ -1.82
NUP60YAR002W SPO21Q12411 609 aa3.66□□□□□ -1.82
NUP60YAR002W PGK1P00560 416 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W THS1P04801 734 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W PCK1P10963 549 aa3.66□□□□□ -1.82
NUP60YAR002W NIP100P33420 868 aa3.66□□□□□ -1.82
NUP60YAR002W TGL1P34163 548 aa3.66□□□□□ -1.82
NUP60YAR002W WHI3P34761 661 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W MRP8P35719 219 aa3.66□□□□□ -1.82
NUP60YAR002W UBP11P36026 717 aa3.66□□□□□ -1.82
NUP60YAR002W NMD3P38861 518 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W SMF1P38925 575 aa3.66□□□□□ -1.82
NUP60YAR002W CCT4P39078 528 aaKnown RBP3.66□□□□□ -1.82
NUP60YAR002W CIN4P39110 191 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 95.1 ms