RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	HUL4	P40985	892 aa		3.87	□□□□□ -1.79
RUD3	YOR216C	ORC4	P54791	529 aa		3.87	□□□□□ -1.79
RUD3	YOR216C	GEP3	Q08622	556 aa		3.87	□□□□□ -1.79
RUD3	YOR216C	CLF1	Q12309	687 aa	Predicted RBP	3.87	□□□□□ -1.79
RUD3	YOR216C	APN1	P22936	367 aa		3.86	□□□□□ -1.79
RUD3	YOR216C	MBR1	P23493	339 aa		3.86	□□□□□ -1.79
RUD3	YOR216C	SAT4	P25333	603 aa	Known RBP	3.86	□□□□□ -1.79
RUD3	YOR216C	MIT1	P40002	666 aa		3.86	□□□□□ -1.79
RUD3	YOR216C	YMC1	P32331	307 aa		3.86	□□□□□ -1.79
RUD3	YOR216C	YGR151C	P53287	111 aa		3.86	□□□□□ -1.79
RUD3	YOR216C	HMO1	Q03973	246 aa	Known RBP	3.86	□□□□□ -1.79
RUD3	YOR216C	PHO5	P00635	467 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	ADE5,7	P07244	802 aa	Known RBP	3.85	□□□□□ -1.79
RUD3	YOR216C	STE4	P18851	423 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	RNR1	P21524	888 aa	Known RBP	3.85	□□□□□ -1.79
RUD3	YOR216C	PEX1	P24004	1043 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	MIP6	P38760	659 aa	Known RBP	3.85	□□□□□ -1.79
RUD3	YOR216C	PMC1	P38929	1173 aa	Predicted RBP	3.85	□□□□□ -1.79
RUD3	YOR216C	TAX4	P47030	604 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	RTA1	P53047	317 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	SPC98	P53540	846 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	HFD1	Q04458	532 aa		3.85	□□□□□ -1.79
RUD3	YOR216C	UGP1	P32861	499 aa	Known RBP	3.84	□□□□□ -1.8
RUD3	YOR216C	YHR020W	P38708	688 aa	Known RBP	3.84	□□□□□ -1.8
RUD3	YOR216C	CCT5	P40413	562 aa	Known RBP	3.84	□□□□□ -1.8
RUD3	YOR216C	TIM54	P47045	478 aa		3.84	□□□□□ -1.8
RUD3	YOR216C	BNA2	P47125	453 aa		3.84	□□□□□ -1.8
RUD3	YOR216C	Q0142	Q9ZZW4	58 aa		3.84	□□□□□ -1.8
RUD3	YOR216C	KSP1	P38691	1029 aa	Known RBP	3.83	□□□□□ -1.8
RUD3	YOR216C	NOP9	P47077	666 aa	Known RBP	3.83	□□□□□ -1.8
RUD3	YOR216C	BCS1	P32839	456 aa		3.82	□□□□□ -1.8
RUD3	YOR216C	YHR097C	P38809	366 aa	Known RBP	3.82	□□□□□ -1.8
RUD3	YOR216C	ULP2	P40537	1034 aa	Predicted RBP	3.82	□□□□□ -1.8
RUD3	YOR216C	ASN1	P49089	572 aa	Known RBP	3.82	□□□□□ -1.8
RUD3	YOR216C	REC102	Q02721	264 aa		3.82	□□□□□ -1.8
RUD3	YOR216C	BMS1	Q08965	1183 aa	Known RBP	3.82	□□□□□ -1.8
RUD3	YOR216C	FLC1	Q08967	793 aa		3.82	□□□□□ -1.8
RUD3	YOR216C	GID8	P40208	455 aa		3.81	□□□□□ -1.8
RUD3	YOR216C	TAF7	Q05021	590 aa		3.81	□□□□□ -1.8
RUD3	YOR216C	ULA1	Q12059	462 aa		3.81	□□□□□ -1.8
RUD3	YOR216C	ABF1	P14164	731 aa		3.8	□□□□□ -1.8
RUD3	YOR216C	YFL052W	P43551	465 aa		3.8	□□□□□ -1.8
RUD3	YOR216C	THI22	Q06490	572 aa		3.8	□□□□□ -1.8
RUD3	YOR216C	YDL086W	Q07505	273 aa		3.8	□□□□□ -1.8
RUD3	YOR216C	ECM3	Q99252	613 aa		3.8	□□□□□ -1.8
RUD3	YOR216C	RAD18	P10862	487 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	BIT2	P38346	545 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	RSP5	P39940	809 aa	Known RBP	3.79	□□□□□ -1.8
RUD3	YOR216C	NMA2	P53204	395 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	STP1	Q00947	519 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	LAM4	P38800	1345 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	CAN1	P04817	590 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	PRP28	P23394	588 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	YNL195C	P40168	261 aa		3.79	□□□□□ -1.8
RUD3	YOR216C	SEC6	P32844	805 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	MTC2	P34246	357 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	MCD4	P36051	919 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	HOT13	P36078	116 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	PIG2	P40187	538 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	PSA1	P41940	361 aa	Known RBP	3.78	□□□□□ -1.8
RUD3	YOR216C	RSC8	P43609	557 aa	Known RBP	3.78	□□□□□ -1.8
RUD3	YOR216C	IRC8	P47046	822 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	COX18	P53239	316 aa		3.78	□□□□□ -1.8
RUD3	YOR216C	CHS5	Q12114	671 aa	Known RBP	3.78	□□□□□ -1.8
RUD3	YOR216C	MPS3	P47069	682 aa		3.77	□□□□□ -1.81
RUD3	YOR216C	NPY1	P53164	384 aa		3.77	□□□□□ -1.81
RUD3	YOR216C	DIA2	Q08496	732 aa	Predicted RBP	3.77	□□□□□ -1.81
RUD3	YOR216C	TPK2	P06245	380 aa		3.76	□□□□□ -1.81
RUD3	YOR216C	SNU71	P53207	620 aa	Known RBP	3.76	□□□□□ -1.81
RUD3	YOR216C	MDM20	Q12387	796 aa	Known RBP	3.76	□□□□□ -1.81
RUD3	YOR216C	ECM32	P32644	1121 aa	Known RBP	3.75	□□□□□ -1.81
RUD3	YOR216C	YKR051W	P36142	418 aa		3.75	□□□□□ -1.81
RUD3	YOR216C	CTP1	P38152	299 aa		3.75	□□□□□ -1.81
RUD3	YOR216C	HUL5	P53119	910 aa		3.75	□□□□□ -1.81
RUD3	YOR216C	LEE1	Q02799	301 aa	Known RBP	3.75	□□□□□ -1.81
RUD3	YOR216C	ARG7	Q04728	441 aa		3.75	□□□□□ -1.81
RUD3	YOR216C	MIH1	P23748	554 aa		3.74	□□□□□ -1.81
RUD3	YOR216C	FEN2	P25621	512 aa	Known RBP	3.74	□□□□□ -1.81
RUD3	YOR216C	PAM1	P37304	830 aa	Known RBP	3.74	□□□□□ -1.81
RUD3	YOR216C	KHA1	P40309	873 aa		3.74	□□□□□ -1.81
RUD3	YOR216C	PMT6	P42934	759 aa		3.74	□□□□□ -1.81
RUD3	YOR216C	RFX1	P48743	811 aa		3.74	□□□□□ -1.81
RUD3	YOR216C	RKI1	Q12189	258 aa		3.74	□□□□□ -1.81
RUD3	YOR216C	AI5_ALPHA	Q9ZZX1	630 aa		3.74	□□□□□ -1.81
RUD3	YOR216C	APL3	P38065	1025 aa		3.73	□□□□□ -1.81
RUD3	YOR216C	PIP2	P52960	996 aa		3.73	□□□□□ -1.81
RUD3	YOR216C	ARP4	P80428	489 aa		3.73	□□□□□ -1.81
RUD3	YOR216C	YDR179W-A	Q03983	463 aa		3.73	□□□□□ -1.81
RUD3	YOR216C	YSH1	Q06224	779 aa	Predicted RBP	3.73	□□□□□ -1.81
RUD3	YOR216C	RPN10	P38886	268 aa	Known RBP	3.73	□□□□□ -1.81
RUD3	YOR216C	PCL10	P53124	433 aa		3.73	□□□□□ -1.81
RUD3	YOR216C	RPN7	Q06103	429 aa	Known RBP	3.73	□□□□□ -1.81
RUD3	YOR216C	MSS1	P32559	526 aa	Predicted RBP	3.72	□□□□□ -1.81
RUD3	YOR216C	YEL1	P34225	687 aa		3.72	□□□□□ -1.81
RUD3	YOR216C	YKR018C	P36114	725 aa		3.72	□□□□□ -1.81
RUD3	YOR216C	GDH3	P39708	457 aa		3.72	□□□□□ -1.81
RUD3	YOR216C	FRE7	Q12333	620 aa		3.72	□□□□□ -1.81
RUD3	YOR216C	GAL11	P19659	1081 aa		3.71	□□□□□ -1.82
RUD3	YOR216C	AAD3	P25612	363 aa		3.71	□□□□□ -1.82
RUD3	YOR216C	STO1	P34160	861 aa	Known RBP	3.71	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms