RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP3	YNL257C	TUB3	P09734	445 aa	Known RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	CMP2	P14747	604 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	YKU70	P32807	602 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	EBP2	P36049	427 aa	Known RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	YFL052W	P43551	465 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	SSY5	P47002	699 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	CNM67	P53865	581 aa	Known RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	RSM24	Q03976	319 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	BRE1	Q07457	700 aa	Known RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	SSM4	P40318	1319 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	SPE1	P08432	466 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	ADP1	P25371	1049 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	EAF5	P39995	279 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	GID8	P40208	455 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	GCV2	P49095	1034 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	NOP15	P53927	220 aa	Predicted RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	VPS72	Q03388	795 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	YPS7	Q06325	596 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	YPR053C	Q6Q5F3	151 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	SPO14	P36126	1683 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	KIN2	P13186	1147 aa	Known RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	IES1	P43579	692 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	IRC5	P43610	853 aa		3.17	□□□□□ -1.9
SIP3	YNL257C	MUS81	Q04149	632 aa	Predicted RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	GLT1	Q12680	2145 aa	Known RBP	3.17	□□□□□ -1.9
SIP3	YNL257C	IKI3	Q06706	1349 aa	Known RBP	3.16	□□□□□ -1.9
SIP3	YNL257C	HOP1	P20050	605 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	IME1	P21190	360 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	DBF20	P32328	564 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	POA1	P38218	177 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	PTA1	Q01329	785 aa	Predicted RBP	3.16	□□□□□ -1.9
SIP3	YNL257C	RCR2	Q03446	210 aa	Known RBP	3.16	□□□□□ -1.9
SIP3	YNL257C	OMS1	Q06668	471 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	NSI1	Q12457	570 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	SNQ2	P32568	1501 aa	Known RBP	3.16	□□□□□ -1.9
SIP3	YNL257C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
SIP3	YNL257C	MF(ALPHA)2	P32435	120 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	YPT7	P32939	208 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	YHR202W	P38887	602 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	MSS4	P38994	779 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	EMP65	P40085	556 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	PUS4	P48567	403 aa	Known RBP	3.16	□□□□□ -1.9
SIP3	YNL257C	RKR1	Q04781	1562 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	YKL133C	P36066	463 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	KAE1	P36132	386 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	YHR078W	P38799	552 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	VID28	P40547	921 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	NCS6	P53088	359 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	YPL062W	Q02781	134 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	TPO1	Q07824	586 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	YOL114C	Q12322	202 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	NKP1	Q12493	238 aa		3.16	□□□□□ -1.9
SIP3	YNL257C	ARO1	P08566	1588 aa	Known RBP	3.15	□□□□□ -1.9
SIP3	YNL257C	CYC7	P00045	113 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	HXT4	P32467	576 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	YKR073C	P36153	106 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	ERR3	P42222	437 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	PFA3	P42836	336 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	MET12	P46151	657 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	PUS2	P53167	370 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	STP4	Q07351	490 aa		3.15	□□□□□ -1.9
SIP3	YNL257C	NGL1	Q08213	363 aa	Known RBP	3.15	□□□□□ -1.9
SIP3	YNL257C	DOP1	Q03921	1698 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	IMG2	P25642	146 aa	Predicted RBP	3.15	□□□□□ -1.91
SIP3	YNL257C	SAK1	P38990	1142 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	ACA1	P39970	489 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	CHA4	P43634	648 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	DUS4	Q06063	367 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	PDR12	Q02785	1511 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	RPO21	P04050	1733 aa	Known RBP	3.15	□□□□□ -1.91
SIP3	YNL257C	SWR1	Q05471	1514 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	COQ2	P32378	372 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	ETP1	P38748	585 aa	Known RBP	3.15	□□□□□ -1.91
SIP3	YNL257C	VID27	P40157	782 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	MRPS35	P53292	345 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	VPS30	Q02948	557 aa		3.15	□□□□□ -1.91
SIP3	YNL257C	PFK1	P16861	987 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	CWC2	Q12046	339 aa	Predicted RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	RPA135	P22138	1203 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	SEC21	P32074	935 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	TOS1	P38288	455 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	SET2	P46995	733 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	CTH1	P47976	325 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	ASI2	P53895	289 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	VMS1	Q04311	632 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	HMI1	Q12039	706 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	RTK1	Q12100	620 aa	Predicted RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	ADE2	P21264	571 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	PRS1	P32895	427 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	ATG19	P35193	415 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	VHR1	P40522	640 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	ROT1	Q03691	256 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	HMO1	Q03973	246 aa	Known RBP	3.14	□□□□□ -1.91
SIP3	YNL257C	HLR1	Q04429	423 aa		3.14	□□□□□ -1.91
SIP3	YNL257C	HCA4	P20448	770 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SIP3	YNL257C	ICP55	P40051	511 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	MAD2	P40958	196 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	RNR4	P49723	345 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	PDR15	Q04182	1529 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms