RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	YCR016W	P25617	290 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	VPH2	P32341	215 aa		2.32	□□□□□ -2.04
STH1	YIL126W	SMY1	P32364	656 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	GCD11	P32481	527 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	YBR287W	P38355	427 aa		2.32	□□□□□ -2.04
STH1	YIL126W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	2.32	□□□□□ -2.04	not detected
STH1	YIL126W	SPC72	P39723	622 aa		2.32	□□□□□ -2.04
STH1	YIL126W	IRR1	P40541	1150 aa		2.32	□□□□□ -2.04
STH1	YIL126W	DSD1	P53095	428 aa		2.32	□□□□□ -2.04
STH1	YIL126W	CGR1	P53188	120 aa		2.32	□□□□□ -2.04
STH1	YIL126W	ERP6	P53198	216 aa		2.32	□□□□□ -2.04
STH1	YIL126W	RTS3	P53289	263 aa		2.32	□□□□□ -2.04
STH1	YIL126W	CWC25	P53854	179 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	REX2	P54964	269 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	YML108W	Q03759	105 aa		2.32	□□□□□ -2.04
STH1	YIL126W	MTC5	Q03897	1148 aa		2.32	□□□□□ -2.04
STH1	YIL126W	GIS4	Q04233	774 aa		2.32	□□□□□ -2.04
STH1	YIL126W	ORM2	Q06144	216 aa		2.32	□□□□□ -2.04
STH1	YIL126W	GPN2	Q08726	347 aa	Predicted RBP	2.32	□□□□□ -2.04
STH1	YIL126W	BUD7	Q08754	746 aa		2.32	□□□□□ -2.04
STH1	YIL126W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.32	□□□□□ -2.04	not detected
STH1	YIL126W	AI3	P03877	415 aa		2.32	□□□□□ -2.04
STH1	YIL126W	GYP6	P32806	458 aa		2.32	□□□□□ -2.04
STH1	YIL126W	KSP1	P38691	1029 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	CCT3	P39077	534 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	RCY1	P39531	840 aa		2.32	□□□□□ -2.04
STH1	YIL126W	GEM1	P39722	662 aa		2.32	□□□□□ -2.04
STH1	YIL126W	RIC1	P40395	1056 aa		2.32	□□□□□ -2.04
STH1	YIL126W	PHB1	P40961	287 aa		2.32	□□□□□ -2.04
STH1	YIL126W	NUT1	P53114	1132 aa		2.32	□□□□□ -2.04
STH1	YIL126W	FYV6	P53913	173 aa		2.32	□□□□□ -2.04
STH1	YIL126W	BNA5	Q05979	453 aa		2.32	□□□□□ -2.04
STH1	YIL126W	PSR2	Q07949	397 aa		2.32	□□□□□ -2.04
STH1	YIL126W	KEL3	Q08979	651 aa	Predicted RBP	2.32	□□□□□ -2.04
STH1	YIL126W	MDM20	Q12387	796 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	EFG1	Q3E705	233 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	LSO2	Q3E772	92 aa	Known RBP	2.32	□□□□□ -2.04
STH1	YIL126W	YML002W	P0CF17	737 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SBP1	P10080	294 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	KAR1	P11927	433 aa		2.31	□□□□□ -2.04
STH1	YIL126W	NCP1	P16603	691 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	RGR1	P19263	1082 aa		2.31	□□□□□ -2.04
STH1	YIL126W	GAL11	P19659	1081 aa		2.31	□□□□□ -2.04
STH1	YIL126W	YAP1	P19880	650 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	ESS1	P22696	170 aa		2.31	□□□□□ -2.04
STH1	YIL126W	ANP1	P32629	500 aa		2.31	□□□□□ -2.04
STH1	YIL126W	XRS2	P33301	854 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RIB7	P33312	244 aa		2.31	□□□□□ -2.04
STH1	YIL126W	HSM3	P38348	480 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SPC97	P38863	823 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RTS1	P38903	757 aa		2.31	□□□□□ -2.04
STH1	YIL126W	PTC2	P39966	464 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	MVP1	P40959	511 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	ALR2	P43553	858 aa		2.31	□□□□□ -2.04
STH1	YIL126W	ASK10	P48361	1146 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RIM21	P48565	533 aa		2.31	□□□□□ -2.04
STH1	YIL126W	BRO1	P48582	844 aa		2.31	□□□□□ -2.04
STH1	YIL126W	APT1	P49435	187 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	STB4	P50104	949 aa		2.31	□□□□□ -2.04
STH1	YIL126W	ALD6	P54115	500 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	MSC2	Q03455	724 aa		2.31	□□□□□ -2.04
STH1	YIL126W	STE20	Q03497	939 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	ATG38	Q05789	226 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	REH1	Q06709	432 aa		2.31	□□□□□ -2.04
STH1	YIL126W	YPL191C	Q08930	360 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RTK1	Q12100	620 aa	Predicted RBP	2.31	□□□□□ -2.04
STH1	YIL126W	RUP1	Q12242	671 aa		2.31	□□□□□ -2.04
STH1	YIL126W	LCB4	Q12246	624 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RRP36	Q12481	300 aa	Predicted RBP	2.31	□□□□□ -2.04
STH1	YIL126W	SWI1	P09547	1314 aa		2.31	□□□□□ -2.04
STH1	YIL126W	CDC31	P06704	161 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	STE4	P18851	423 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RAD53	P22216	821 aa		2.31	□□□□□ -2.04
STH1	YIL126W	APL1	P27351	700 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RPC34	P32910	317 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SGE1	P33335	543 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SLA2	P33338	968 aa		2.31	□□□□□ -2.04
STH1	YIL126W	TTI1	P36097	1038 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RRF1	P38771	230 aa		2.31	□□□□□ -2.04
STH1	YIL126W	VAC8	P39968	578 aa		2.31	□□□□□ -2.04
STH1	YIL126W	KAP123	P40069	1113 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	GIM3	P53900	129 aa		2.31	□□□□□ -2.04
STH1	YIL126W	LEE1	Q02799	301 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	TIF35	Q04067	274 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	YLR287C	Q05881	355 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SPN1	Q06505	410 aa	Predicted RBP	2.31	□□□□□ -2.04
STH1	YIL126W	YPL277C	Q08989	487 aa		2.31	□□□□□ -2.04
STH1	YIL126W	RIO1	Q12196	484 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	TAO3	P40468	2376 aa		2.31	□□□□□ -2.04
STH1	YIL126W	TUF1	P02992	437 aa	Known RBP	2.31	□□□□□ -2.04
STH1	YIL126W	TSR4	P25040	408 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SSO1	P32867	290 aa		2.31	□□□□□ -2.04
STH1	YIL126W	UBC6	P33296	250 aa	Predicted RBP	2.31	□□□□□ -2.04
STH1	YIL126W	SQT1	P35184	431 aa		2.31	□□□□□ -2.04
STH1	YIL126W	TOS1	P38288	455 aa		2.31	□□□□□ -2.04
STH1	YIL126W	YEL020C	P39994	560 aa		2.31	□□□□□ -2.04
STH1	YIL126W	GNP1	P48813	663 aa		2.31	□□□□□ -2.04
STH1	YIL126W	PEX14	P53112	341 aa		2.31	□□□□□ -2.04
STH1	YIL126W	MLC1	P53141	149 aa		2.31	□□□□□ -2.04
STH1	YIL126W	SHE9	Q04172	456 aa		2.31	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms