RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C TAX4P47030 604 aa3.89□□□□□ -1.79
RTR1YER139C SPC98P53540 846 aa3.89□□□□□ -1.79
RTR1YER139C PHO5P00635 467 aa3.88□□□□□ -1.79
RTR1YER139C CIT1P00890 479 aa3.88□□□□□ -1.79
RTR1YER139C ADE5,7P07244 802 aaKnown RBP3.88□□□□□ -1.79
RTR1YER139C RAD4P14736 754 aa3.88□□□□□ -1.79
RTR1YER139C YGR151CP53287 111 aa3.88□□□□□ -1.79
RTR1YER139C ORC4P54791 529 aa3.88□□□□□ -1.79
RTR1YER139C HFD1Q04458 532 aa3.88□□□□□ -1.79
RTR1YER139C GEP3Q08622 556 aa3.88□□□□□ -1.79
RTR1YER139C RNR1P21524 888 aaKnown RBP3.87□□□□□ -1.79
RTR1YER139C UGP1P32861 499 aaKnown RBP3.87□□□□□ -1.79
RTR1YER139C PMC1P38929 1173 aaPredicted RBP3.87□□□□□ -1.79
RTR1YER139C HUL4P40985 892 aa3.87□□□□□ -1.79
RTR1YER139C HMO1Q03973 246 aaKnown RBP3.87□□□□□ -1.79
RTR1YER139C WRS1Q12109 432 aaKnown RBP3.87□□□□□ -1.79
RTR1YER139C KSP1P38691 1029 aaKnown RBP3.86□□□□□ -1.79
RTR1YER139C MEP2P41948 499 aa3.86□□□□□ -1.79
RTR1YER139C ASN1P49089 572 aaKnown RBP3.86□□□□□ -1.79
RTR1YER139C YGR125WP53273 1036 aa3.86□□□□□ -1.79
RTR1YER139C STP1Q00947 519 aa3.86□□□□□ -1.79
RTR1YER139C RSP5P39940 809 aaKnown RBP3.85□□□□□ -1.79
RTR1YER139C YPL068CQ02749 293 aa3.85□□□□□ -1.79
RTR1YER139C ULA1Q12059 462 aa3.85□□□□□ -1.79
RTR1YER139C PEX1P24004 1043 aa3.84□□□□□ -1.79
RTR1YER139C MIP6P38760 659 aaKnown RBP3.84□□□□□ -1.79
RTR1YER139C CCT5P40413 562 aaKnown RBP3.84□□□□□ -1.79
RTR1YER139C ULP2P40537 1034 aaPredicted RBP3.84□□□□□ -1.79
RTR1YER139C Q0142Q9ZZW4 58 aa3.84□□□□□ -1.79
RTR1YER139C ABF1P14164 731 aa3.83□□□□□ -1.8
RTR1YER139C HOT13P36078 116 aa3.83□□□□□ -1.8
RTR1YER139C YHR097CP38809 366 aaKnown RBP3.83□□□□□ -1.8
RTR1YER139C TIM54P47045 478 aa3.83□□□□□ -1.8
RTR1YER139C BNA2P47125 453 aa3.83□□□□□ -1.8
RTR1YER139C REC102Q02721 264 aa3.83□□□□□ -1.8
RTR1YER139C THI22Q06490 572 aa3.83□□□□□ -1.8
RTR1YER139C BMS1Q08965 1183 aaKnown RBP3.83□□□□□ -1.8
RTR1YER139C ECM3Q99252 613 aa3.83□□□□□ -1.8
RTR1YER139C LAM4P38800 1345 aa3.82□□□□□ -1.8
RTR1YER139C BCS1P32839 456 aa3.82□□□□□ -1.8
RTR1YER139C YHR020WP38708 688 aaKnown RBP3.82□□□□□ -1.8
RTR1YER139C YFL052WP43551 465 aa3.82□□□□□ -1.8
RTR1YER139C NOP9P47077 666 aaKnown RBP3.82□□□□□ -1.8
RTR1YER139C RTA1P53047 317 aa3.82□□□□□ -1.8
RTR1YER139C YDL086WQ07505 273 aa3.82□□□□□ -1.8
RTR1YER139C RAD18P10862 487 aa3.81□□□□□ -1.8
RTR1YER139C STE4P18851 423 aa3.81□□□□□ -1.8
RTR1YER139C BIT2P38346 545 aa3.81□□□□□ -1.8
RTR1YER139C PMT6P42934 759 aa3.81□□□□□ -1.8
RTR1YER139C NMA2P53204 395 aa3.81□□□□□ -1.8
RTR1YER139C CHS5Q12114 671 aaKnown RBP3.81□□□□□ -1.8
RTR1YER139C TPK2P06245 380 aa3.8□□□□□ -1.8
RTR1YER139C PSA1P41940 361 aaKnown RBP3.8□□□□□ -1.8
RTR1YER139C COX18P53239 316 aa3.8□□□□□ -1.8
RTR1YER139C MDM20Q12387 796 aaKnown RBP3.8□□□□□ -1.8
RTR1YER139C PRP28P23394 588 aa3.79□□□□□ -1.8
RTR1YER139C YNL195CP40168 261 aa3.79□□□□□ -1.8
RTR1YER139C PIG2P40187 538 aa3.79□□□□□ -1.8
RTR1YER139C GID8P40208 455 aa3.79□□□□□ -1.8
RTR1YER139C FLC1Q08967 793 aa3.79□□□□□ -1.8
RTR1YER139C SEC6P32844 805 aa3.78□□□□□ -1.8
RTR1YER139C RSC8P43609 557 aaKnown RBP3.78□□□□□ -1.8
RTR1YER139C MPS3P47069 682 aa3.78□□□□□ -1.8
RTR1YER139C PIP2P52960 996 aa3.78□□□□□ -1.8
RTR1YER139C RKI1Q12189 258 aa3.78□□□□□ -1.8
RTR1YER139C ECM32P32644 1121 aaKnown RBP3.77□□□□□ -1.81
RTR1YER139C MCD4P36051 919 aa3.77□□□□□ -1.81
RTR1YER139C YKR051WP36142 418 aa3.77□□□□□ -1.81
RTR1YER139C CTP1P38152 299 aa3.77□□□□□ -1.81
RTR1YER139C NPY1P53164 384 aa3.77□□□□□ -1.81
RTR1YER139C YDR179W-AQ03983 463 aa3.77□□□□□ -1.81
RTR1YER139C DIA2Q08496 732 aaPredicted RBP3.77□□□□□ -1.81
RTR1YER139C AI5_ALPHAQ9ZZX1 630 aa3.77□□□□□ -1.81
RTR1YER139C CAN1P04817 590 aa3.76□□□□□ -1.81
RTR1YER139C APL3P38065 1025 aa3.76□□□□□ -1.81
RTR1YER139C RFX1P48743 811 aa3.76□□□□□ -1.81
RTR1YER139C ARG7Q04728 441 aa3.76□□□□□ -1.81
RTR1YER139C YSH1Q06224 779 aaPredicted RBP3.76□□□□□ -1.81
RTR1YER139C FEN2P25621 512 aaKnown RBP3.75□□□□□ -1.81
RTR1YER139C MTC2P34246 357 aa3.75□□□□□ -1.81
RTR1YER139C KHA1P40309 873 aa3.75□□□□□ -1.81
RTR1YER139C IRC8P47046 822 aa3.75□□□□□ -1.81
RTR1YER139C AAD3P25612 363 aa3.74□□□□□ -1.81
RTR1YER139C SNF12P53628 566 aa3.74□□□□□ -1.81
RTR1YER139C ARP4P80428 489 aa3.74□□□□□ -1.81
RTR1YER139C LEE1Q02799 301 aaKnown RBP3.74□□□□□ -1.81
RTR1YER139C FRE7Q12333 620 aa3.74□□□□□ -1.81
RTR1YER139C MIH1P23748 554 aa3.73□□□□□ -1.81
RTR1YER139C RPN10P38886 268 aaKnown RBP3.73□□□□□ -1.81
RTR1YER139C PCL10P53124 433 aa3.73□□□□□ -1.81
RTR1YER139C DIP5P53388 608 aa3.73□□□□□ -1.81
RTR1YER139C RPN7Q06103 429 aaKnown RBP3.73□□□□□ -1.81
RTR1YER139C ORM2Q06144 216 aa3.73□□□□□ -1.81
RTR1YER139C MSS1P32559 526 aaPredicted RBP3.72□□□□□ -1.81
RTR1YER139C YEL1P34225 687 aa3.72□□□□□ -1.81
RTR1YER139C NGL2Q03264 515 aaKnown RBP3.72□□□□□ -1.81
RTR1YER139C VBA3P25594 458 aa3.71□□□□□ -1.82
RTR1YER139C YKR018CP36114 725 aa3.71□□□□□ -1.82
RTR1YER139C YIL077CP40508 320 aa3.71□□□□□ -1.82
RTR1YER139C HUL5P53119 910 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms