RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W MDM38Q08179 573 aa3.54□□□□□ -1.84
SIZ1YDR409W CKI1P20485 582 aa3.54□□□□□ -1.84
SIZ1YDR409W MRPS28P21771 286 aa3.54□□□□□ -1.84
SIZ1YDR409W NUD1P32336 851 aa3.54□□□□□ -1.84
SIZ1YDR409W ERG3P32353 365 aa3.54□□□□□ -1.84
SIZ1YDR409W LYP1P32487 611 aa3.54□□□□□ -1.84
SIZ1YDR409W SHM2P37291 469 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W RPN10P38886 268 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W MBP1P39678 833 aa3.54□□□□□ -1.84
SIZ1YDR409W CIT3P43635 486 aa3.54□□□□□ -1.84
SIZ1YDR409W PRO2P54885 456 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W GTR1Q00582 310 aa3.54□□□□□ -1.84
SIZ1YDR409W FRK1Q03002 865 aaPredicted RBP3.54□□□□□ -1.84
SIZ1YDR409W UTP21Q06078 939 aaPredicted RBP3.54□□□□□ -1.84
SIZ1YDR409W CMS1Q07897 291 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W ABP140Q08641 628 aaKnown RBP3.54□□□□□ -1.84
SIZ1YDR409W SMC6Q12749 1114 aa3.54□□□□□ -1.84
SIZ1YDR409W MTF2P10849 440 aa3.53□□□□□ -1.84
SIZ1YDR409W NCP1P16603 691 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W PFK2P16862 959 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SIZ1YDR409W SPO12P17123 173 aa3.53□□□□□ -1.84
SIZ1YDR409W CDC60P26637 1090 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W OLA1P38219 394 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W PAN5P38787 379 aa3.53□□□□□ -1.84
SIZ1YDR409W SPC72P39723 622 aa3.53□□□□□ -1.84
SIZ1YDR409W YJR098CP47139 656 aa3.53□□□□□ -1.84
SIZ1YDR409W HLJ1P48353 224 aa3.53□□□□□ -1.84
SIZ1YDR409W PUS4P48567 403 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W HFM1P51979 1187 aa3.53□□□□□ -1.84
SIZ1YDR409W TAD1P53065 400 aa3.53□□□□□ -1.84
SIZ1YDR409W NNF2P53253 936 aa3.53□□□□□ -1.84
SIZ1YDR409W MEC3Q02574 474 aa3.53□□□□□ -1.84
SIZ1YDR409W YDR341CQ05506 607 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W DPL1Q05567 589 aa3.53□□□□□ -1.84
SIZ1YDR409W YLR177WQ06251 628 aa3.53□□□□□ -1.84
SIZ1YDR409W YLR352WQ06479 807 aa3.53□□□□□ -1.84
SIZ1YDR409W AVO1Q08236 1176 aa3.53□□□□□ -1.84
SIZ1YDR409W SCM3Q12334 223 aa3.53□□□□□ -1.84
SIZ1YDR409W CEX1Q12453 761 aa3.53□□□□□ -1.84
SIZ1YDR409W SBA1P28707 216 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W HXT1P32465 570 aa3.53□□□□□ -1.84
SIZ1YDR409W DPH5P32469 300 aaPredicted RBP3.53□□□□□ -1.84
SIZ1YDR409W SRB4P32569 687 aa3.53□□□□□ -1.84
SIZ1YDR409W GCG1P32656 232 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W NPL6P32832 435 aa3.53□□□□□ -1.84
SIZ1YDR409W YME2P32843 850 aa3.53□□□□□ -1.84
SIZ1YDR409W CBF5P33322 483 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SIZ1YDR409W YKR018CP36114 725 aa3.53□□□□□ -1.84
SIZ1YDR409W RIM11P38615 370 aa3.53□□□□□ -1.84
SIZ1YDR409W MIP6P38760 659 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W CRG1P38892 291 aaRIP-Chip data3.53□□□□□ -1.84 RIP-Chip
SIZ1YDR409W AXL2P38928 823 aa3.53□□□□□ -1.84
SIZ1YDR409W XKS1P42826 600 aa3.53□□□□□ -1.84
SIZ1YDR409W SKP2P42843 763 aa3.53□□□□□ -1.84
SIZ1YDR409W VTC4P47075 721 aa3.53□□□□□ -1.84
SIZ1YDR409W ILM1P47155 203 aa3.53□□□□□ -1.84
SIZ1YDR409W ERP6P53198 216 aa3.53□□□□□ -1.84
SIZ1YDR409W ELP4Q02884 456 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W NOG1Q02892 647 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W FDC1Q03034 503 aa3.53□□□□□ -1.84
SIZ1YDR409W ARP9Q05123 467 aa3.53□□□□□ -1.84
SIZ1YDR409W TRM8Q12009 286 aa3.53□□□□□ -1.84
SIZ1YDR409W FAP7Q12055 197 aaPredicted RBP3.53□□□□□ -1.84
SIZ1YDR409W GET3Q12154 354 aaKnown RBP3.53□□□□□ -1.84
SIZ1YDR409W CDC8P00572 216 aa3.52□□□□□ -1.85
SIZ1YDR409W TUF1P02992 437 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W CDC6P09119 513 aa3.52□□□□□ -1.85
SIZ1YDR409W SEC18P18759 758 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W PRP9P19736 530 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W PRP5P21372 849 aaPredicted RBP3.52□□□□□ -1.85
SIZ1YDR409W VPS1P21576 704 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W ARG1P22768 420 aa3.52□□□□□ -1.85
SIZ1YDR409W SWI4P25302 1093 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W DAL1P32375 460 aa3.52□□□□□ -1.85
SIZ1YDR409W PEX5P35056 612 aa3.52□□□□□ -1.85
SIZ1YDR409W SQT1P35184 431 aa3.52□□□□□ -1.85
SIZ1YDR409W RIM4P38741 713 aa3.52□□□□□ -1.85
SIZ1YDR409W YEL023CP39992 682 aa3.52□□□□□ -1.85
SIZ1YDR409W GPD2P41911 440 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W AIP1P46680 615 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W SAE2P46946 345 aa3.52□□□□□ -1.85
SIZ1YDR409W HXT16P47185 567 aa3.52□□□□□ -1.85
SIZ1YDR409W KXD1P53158 218 aa3.52□□□□□ -1.85
SIZ1YDR409W CPR6P53691 371 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W SEC5P89102 971 aa3.52□□□□□ -1.85
SIZ1YDR409W ADA2Q02336 434 aa3.52□□□□□ -1.85
SIZ1YDR409W UBP16Q02863 499 aa3.52□□□□□ -1.85
SIZ1YDR409W PSR2Q07949 397 aa3.52□□□□□ -1.85
SIZ1YDR409W PTC5Q12511 572 aa3.52□□□□□ -1.85
SIZ1YDR409W SNF1P06782 633 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W HVG1P0CE11 249 aa3.52□□□□□ -1.85
SIZ1YDR409W PYC1P11154 1178 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W SAC6P32599 642 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W RAD5P32849 1169 aaPredicted RBP3.52□□□□□ -1.85
SIZ1YDR409W BMH2P34730 273 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W AKR1P39010 764 aa3.52□□□□□ -1.85
SIZ1YDR409W NOP16P40007 231 aaKnown RBP3.52□□□□□ -1.85
SIZ1YDR409W RTT105P40063 208 aa3.52□□□□□ -1.85
SIZ1YDR409W VFA1P40080 203 aa3.52□□□□□ -1.85
SIZ1YDR409W FMP10P40098 244 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms