RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C MCD1Q12158 566 aa10.18□□□□□ -0.78
SSN3YPL042C PPS1P38148 807 aa10.18□□□□□ -0.78
SSN3YPL042C SMC3P47037 1230 aa10.18□□□□□ -0.78
SSN3YPL042C EFM5P53200 248 aaKnown RBP10.18□□□□□ -0.78
SSN3YPL042C SEC5P89102 971 aa10.18□□□□□ -0.78
SSN3YPL042C RSM28Q03430 361 aa10.18□□□□□ -0.78
SSN3YPL042C EBS1Q03466 884 aaKnown RBP10.18□□□□□ -0.78
SSN3YPL042C GIC2Q06648 383 aa10.18□□□□□ -0.78
SSN3YPL042C ERP3Q12403 225 aa10.18□□□□□ -0.78
SSN3YPL042C LEU1P07264 779 aaKnown RBP10.17□□□□□ -0.78
SSN3YPL042C SRD1P09007 221 aa10.17□□□□□ -0.78
SSN3YPL042C FAR1P21268 830 aa10.17□□□□□ -0.78
SSN3YPL042C TKL1P23254 680 aaKnown RBP10.17□□□□□ -0.78
SSN3YPL042C YET1P35723 206 aa10.17□□□□□ -0.78
SSN3YPL042C YKL050CP35736 922 aa10.17□□□□□ -0.78
SSN3YPL042C APE3P37302 537 aaKnown RBP10.17□□□□□ -0.78
SSN3YPL042C HSM3P38348 480 aa10.17□□□□□ -0.78
SSN3YPL042C YHR020WP38708 688 aaKnown RBP10.17□□□□□ -0.78
SSN3YPL042C FTR1P40088 404 aa10.17□□□□□ -0.78
SSN3YPL042C RPB2P08518 1224 aaKnown RBP10.16□□□□□ -0.78
SSN3YPL042C OM45P16547 393 aa10.16□□□□□ -0.78
SSN3YPL042C VMA8P32610 256 aaKnown RBP10.16□□□□□ -0.78
SSN3YPL042C ASH1P34233 588 aa10.16□□□□□ -0.78
SSN3YPL042C BNA1P47096 177 aa10.16□□□□□ -0.78
SSN3YPL042C YGL039WP53183 348 aaKnown RBP10.16□□□□□ -0.78
SSN3YPL042C VPS75P53853 264 aa10.16□□□□□ -0.78
SSN3YPL042C TSR2Q06672 205 aaKnown RBP10.16□□□□□ -0.78
SSN3YPL042C CRD1Q07560 283 aa10.16□□□□□ -0.78
SSN3YPL042C YOL075CQ08234 1294 aa10.16□□□□□ -0.78
SSN3YPL042C YPL216WQ08964 1102 aa10.16□□□□□ -0.78
SSN3YPL042C YBL111CQ3E7Y5 667 aa10.16□□□□□ -0.78
SSN3YPL042C CYC8P14922 966 aa10.15□□□□□ -0.78
SSN3YPL042C PHO13P19881 312 aa10.15□□□□□ -0.78
SSN3YPL042C PUP1P25043 261 aa10.15□□□□□ -0.78
SSN3YPL042C MSH2P25847 964 aa10.15□□□□□ -0.78
SSN3YPL042C SMY2P32909 740 aaKnown RBP10.15□□□□□ -0.78
SSN3YPL042C UBP13P38187 747 aa10.15□□□□□ -0.78
SSN3YPL042C ERP5P38819 212 aa10.15□□□□□ -0.78
SSN3YPL042C FIS1P40515 155 aa10.15□□□□□ -0.78
SSN3YPL042C ULP2P40537 1034 aaPredicted RBP10.15□□□□□ -0.78
SSN3YPL042C HUL4P40985 892 aa10.15□□□□□ -0.78
SSN3YPL042C SPR3P41901 512 aa10.15□□□□□ -0.78
SSN3YPL042C ZPR1P53303 486 aaKnown RBP10.15□□□□□ -0.78
SSN3YPL042C SSQ1Q05931 657 aaPredicted RBP10.15□□□□□ -0.78
SSN3YPL042C DUS4Q06063 367 aa10.15□□□□□ -0.78
SSN3YPL042C YDL057WQ07379 328 aa10.15□□□□□ -0.78
SSN3YPL042C YMR084WA2P2R3 262 aa10.15□□□□□ -0.79
SSN3YPL042C REG2P38232 338 aa10.15□□□□□ -0.79
SSN3YPL042C RRN11Q04712 507 aa10.15□□□□□ -0.79
SSN3YPL042C ESC8Q08119 714 aa10.15□□□□□ -0.79
SSN3YPL042C YAP7Q08182 245 aa10.15□□□□□ -0.79
SSN3YPL042C TCO89Q08921 799 aa10.15□□□□□ -0.79
SSN3YPL042C TY3A-GQ12173 290 aa10.15□□□□□ -0.79
SSN3YPL042C TY3A-IQ99219 290 aa10.15□□□□□ -0.79
SSN3YPL042C SCP160P06105 1222 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
SSN3YPL042C SSH4P32343 579 aa10.14□□□□□ -0.79
SSN3YPL042C DPH2P32461 534 aa10.14□□□□□ -0.79
SSN3YPL042C MOT2P34909 587 aaKnown RBP10.14□□□□□ -0.79
SSN3YPL042C PXL1P36166 706 aa10.14□□□□□ -0.79
SSN3YPL042C EXO84P38261 753 aa10.14□□□□□ -0.79
SSN3YPL042C RSC30P38781 883 aa10.14□□□□□ -0.79
SSN3YPL042C CTM1P38818 585 aa10.14□□□□□ -0.79
SSN3YPL042C SLD5Q03406 294 aa10.14□□□□□ -0.79
SSN3YPL042C YOR131CQ12486 218 aa10.14□□□□□ -0.79
SSN3YPL042C TMA7Q3E764 64 aaKnown RBP10.14□□□□□ -0.79
SSN3YPL042C PDC1P06169 563 aaKnown RBP10.13□□□□□ -0.79
SSN3YPL042C PXA2P34230 853 aa10.13□□□□□ -0.79
SSN3YPL042C DBP7P36120 742 aaKnown RBP10.13□□□□□ -0.79
SSN3YPL042C PGM2P37012 569 aaKnown RBP10.13□□□□□ -0.79
SSN3YPL042C SHM1P37292 490 aaPredicted RBP10.13□□□□□ -0.79
SSN3YPL042C NOP4P37838 685 aaKnown RBP10.13□□□□□ -0.79
SSN3YPL042C RPN3P40016 523 aaKnown RBP10.13□□□□□ -0.79
SSN3YPL042C HMF1P40037 129 aaKnown RBP10.13□□□□□ -0.79
SSN3YPL042C YFL034WP43564 1073 aa10.13□□□□□ -0.79
SSN3YPL042C TOS3P43637 560 aa10.13□□□□□ -0.79
SSN3YPL042C UBP15P50101 1230 aa10.13□□□□□ -0.79
SSN3YPL042C YOL087CQ99247 1116 aa10.13□□□□□ -0.79
SSN3YPL042C PET494P07390 489 aaPredicted RBP10.12□□□□□ -0.79
SSN3YPL042C SFA1P32771 386 aa10.12□□□□□ -0.79
SSN3YPL042C MIP6P38760 659 aaKnown RBP10.12□□□□□ -0.79
SSN3YPL042C SPT8P38915 602 aa10.12□□□□□ -0.79
SSN3YPL042C RAD26P40352 1085 aa10.12□□□□□ -0.79
SSN3YPL042C NBP1P52919 319 aaPredicted RBP10.12□□□□□ -0.79
SSN3YPL042C ATP4P05626 244 aa10.12□□□□□ -0.79
SSN3YPL042C RPC40P07703 335 aaKnown RBP10.12□□□□□ -0.79
SSN3YPL042C RPS6AP0CX37 236 aaKnown RBP10.12□□□□□ -0.79
SSN3YPL042C RPS6BP0CX38 236 aaPredicted RBP10.12□□□□□ -0.79
SSN3YPL042C TCP1P12612 559 aaKnown RBP10.12□□□□□ -0.79
SSN3YPL042C SPO11P23179 398 aa10.12□□□□□ -0.79
SSN3YPL042C SEC65P29478 273 aa10.12□□□□□ -0.79
SSN3YPL042C RIB7P33312 244 aa10.12□□□□□ -0.79
SSN3YPL042C BUD2P33314 1104 aa10.12□□□□□ -0.79
SSN3YPL042C TFC4P33339 1025 aa10.12□□□□□ -0.79
SSN3YPL042C NUP120P35729 1037 aa10.12□□□□□ -0.79
SSN3YPL042C ESL1P40456 1118 aa10.12□□□□□ -0.79
SSN3YPL042C FYV8P46949 817 aaKnown RBP10.12□□□□□ -0.79
SSN3YPL042C YJL049WP47048 450 aa10.12□□□□□ -0.79
SSN3YPL042C STR2P47164 639 aa10.12□□□□□ -0.79
SSN3YPL042C YMR321CQ04898 105 aa10.12□□□□□ -0.79
SSN3YPL042C ADE13Q05911 482 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms