RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C RPS6AP0CX37 236 aaKnown RBP8.6□□□□□ -1.03
LSP1YPL004C RPS6BP0CX38 236 aaPredicted RBP8.6□□□□□ -1.03
LSP1YPL004C VPH1P32563 840 aaKnown RBP8.6□□□□□ -1.03
LSP1YPL004C PEP7P32609 515 aa8.6□□□□□ -1.03
LSP1YPL004C MNR2P35724 969 aa8.6□□□□□ -1.03
LSP1YPL004C KDX1P36005 433 aa8.6□□□□□ -1.03
LSP1YPL004C PXL1P36166 706 aa8.6□□□□□ -1.03
LSP1YPL004C SHM1P37292 490 aaPredicted RBP8.6□□□□□ -1.03
LSP1YPL004C YBR284WP38150 797 aa8.6□□□□□ -1.03
LSP1YPL004C SAH1P39954 449 aaKnown RBP8.6□□□□□ -1.03
LSP1YPL004C MGA2P40578 1113 aa8.6□□□□□ -1.03
LSP1YPL004C ALT1P52893 592 aa8.6□□□□□ -1.03
LSP1YPL004C SPC98P53540 846 aa8.6□□□□□ -1.03
LSP1YPL004C STE20Q03497 939 aaKnown RBP8.6□□□□□ -1.03
LSP1YPL004C ABP140Q08641 628 aaKnown RBP8.6□□□□□ -1.03
LSP1YPL004C CWC2Q12046 339 aaPredicted RBP8.6□□□□□ -1.03
LSP1YPL004C YPR027CQ12079 277 aa8.6□□□□□ -1.03
LSP1YPL004C GAL10P04397 699 aa8.59□□□□□ -1.03
LSP1YPL004C CHS1P08004 1131 aa8.59□□□□□ -1.03
LSP1YPL004C RNR1P21524 888 aaKnown RBP8.59□□□□□ -1.03
LSP1YPL004C MSH3P25336 1018 aa8.59□□□□□ -1.03
LSP1YPL004C RRT12P25381 491 aa8.59□□□□□ -1.03
LSP1YPL004C SLA2P33338 968 aa8.59□□□□□ -1.03
LSP1YPL004C KIC1P38692 1080 aa8.59□□□□□ -1.03
LSP1YPL004C YHR131CP38835 850 aa8.59□□□□□ -1.03
LSP1YPL004C SPT8P38915 602 aa8.59□□□□□ -1.03
LSP1YPL004C CCC2P38995 1004 aa8.59□□□□□ -1.03
LSP1YPL004C HFM1P51979 1187 aa8.59□□□□□ -1.03
LSP1YPL004C NUT1P53114 1132 aa8.59□□□□□ -1.03
LSP1YPL004C ESBP6P53918 673 aa8.59□□□□□ -1.03
LSP1YPL004C LCD1Q04377 747 aa8.59□□□□□ -1.03
LSP1YPL004C YML083CQ04526 418 aa8.59□□□□□ -1.03
LSP1YPL004C RAD27P26793 382 aa8.58□□□□□ -1.04
LSP1YPL004C CDC11P32458 415 aa8.58□□□□□ -1.04
LSP1YPL004C AGP2P38090 596 aa8.58□□□□□ -1.04
LSP1YPL004C SAF1P38352 637 aa8.58□□□□□ -1.04
LSP1YPL004C APM2P38700 605 aa8.58□□□□□ -1.04
LSP1YPL004C VPS70P47161 811 aa8.58□□□□□ -1.04
LSP1YPL004C ADA2Q02336 434 aa8.58□□□□□ -1.04
LSP1YPL004C CEF1Q03654 590 aaPredicted RBP8.58□□□□□ -1.04
LSP1YPL004C MNL2Q12205 849 aa8.58□□□□□ -1.04
LSP1YPL004C PHO13P19881 312 aa8.57□□□□□ -1.04
LSP1YPL004C SEC65P29478 273 aa8.57□□□□□ -1.04
LSP1YPL004C PEX2P32800 271 aa8.57□□□□□ -1.04
LSP1YPL004C MPE1P35728 441 aaKnown RBP8.57□□□□□ -1.04
LSP1YPL004C TBS1P38114 1094 aa8.57□□□□□ -1.04
LSP1YPL004C YIR016WP40572 265 aa8.57□□□□□ -1.04
LSP1YPL004C OYE3P41816 400 aaPredicted RBP8.57□□□□□ -1.04
LSP1YPL004C ZAP1P47043 880 aa8.57□□□□□ -1.04
LSP1YPL004C YJL045WP47052 634 aa8.57□□□□□ -1.04
LSP1YPL004C BFA1P47113 574 aa8.57□□□□□ -1.04
LSP1YPL004C APM4Q99186 491 aa8.57□□□□□ -1.04
LSP1YPL004C ECM3Q99252 613 aa8.57□□□□□ -1.04
LSP1YPL004C AI5_BETAQ9ZZX0 354 aa8.57□□□□□ -1.04
LSP1YPL004C KGD2P19262 463 aaPredicted RBP8.56□□□□□ -1.04
LSP1YPL004C CBF2P32504 956 aa8.56□□□□□ -1.04
LSP1YPL004C CSG2P35206 410 aa8.56□□□□□ -1.04
LSP1YPL004C SHE3P38272 425 aaKnown RBP8.56□□□□□ -1.04
LSP1YPL004C DSE1P40077 573 aa8.56□□□□□ -1.04
LSP1YPL004C VFA1P40080 203 aa8.56□□□□□ -1.04
LSP1YPL004C MAF1P41910 395 aa8.56□□□□□ -1.04
LSP1YPL004C SBE2P42223 864 aaKnown RBP8.56□□□□□ -1.04
LSP1YPL004C YMR084WA2P2R3 262 aa8.55□□□□□ -1.04
LSP1YPL004C TUP1P16649 713 aa8.55□□□□□ -1.04
LSP1YPL004C DAL2P25335 343 aa8.55□□□□□ -1.04
LSP1YPL004C PGS1P25578 521 aa8.55□□□□□ -1.04
LSP1YPL004C GAC1P28006 793 aa8.55□□□□□ -1.04
LSP1YPL004C EFB1P32471 206 aaKnown RBP8.55□□□□□ -1.04
LSP1YPL004C FRE1P32791 686 aa8.55□□□□□ -1.04
LSP1YPL004C TAF1P46677 1066 aa8.55□□□□□ -1.04
LSP1YPL004C YJR054WP47114 497 aa8.55□□□□□ -1.04
LSP1YPL004C DRN1P53255 507 aaKnown RBP8.55□□□□□ -1.04
LSP1YPL004C VPS75P53853 264 aa8.55□□□□□ -1.04
LSP1YPL004C PIG1Q06216 648 aa8.55□□□□□ -1.04
LSP1YPL004C DAP1Q12091 152 aa8.55□□□□□ -1.04
LSP1YPL004C MET4P32389 672 aa8.54□□□□□ -1.04
LSP1YPL004C SMC1P32908 1225 aa8.54□□□□□ -1.04
LSP1YPL004C XRS2P33301 854 aa8.54□□□□□ -1.04
LSP1YPL004C YMC2P38087 329 aa8.54□□□□□ -1.04
LSP1YPL004C RGD1P38339 666 aa8.54□□□□□ -1.04
LSP1YPL004C DYS1P38791 387 aa8.54□□□□□ -1.04
LSP1YPL004C GEM1P39722 662 aa8.54□□□□□ -1.04
LSP1YPL004C TAD1P53065 400 aa8.54□□□□□ -1.04
LSP1YPL004C MZM1Q03429 123 aaPredicted RBP8.54□□□□□ -1.04
LSP1YPL004C YPR078CQ06813 372 aa8.54□□□□□ -1.04
LSP1YPL004C CDC33P07260 213 aaKnown RBP8.53□□□□□ -1.04
LSP1YPL004C MAS1P10507 462 aa8.53□□□□□ -1.04
LSP1YPL004C VBA3P25594 458 aa8.53□□□□□ -1.04
LSP1YPL004C TKL2P33315 681 aa8.53□□□□□ -1.04
LSP1YPL004C NIP100P33420 868 aa8.53□□□□□ -1.04
LSP1YPL004C VBA5P36172 582 aa8.53□□□□□ -1.04
LSP1YPL004C NOP4P37838 685 aaKnown RBP8.53□□□□□ -1.04
LSP1YPL004C LEO1P38439 464 aa8.53□□□□□ -1.04
LSP1YPL004C TGL3P40308 642 aa8.53□□□□□ -1.04
LSP1YPL004C VPS25P47142 202 aa8.53□□□□□ -1.04
LSP1YPL004C YGL036WP53185 909 aaPredicted RBP8.53□□□□□ -1.04
LSP1YPL004C YNL011CP53980 444 aa8.53□□□□□ -1.04
LSP1YPL004C MUB1Q03162 620 aa8.53□□□□□ -1.04
LSP1YPL004C YML082WQ04533 649 aaKnown RBP8.53□□□□□ -1.04
LSP1YPL004C YLR287CQ05881 355 aa8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 89.1 ms