RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W ORC2P32833 620 aa4.14□□□□□ -1.75
NUP85YJR042W GIP1P38229 639 aa4.14□□□□□ -1.75
NUP85YJR042W SEC27P41811 889 aaKnown RBP4.14□□□□□ -1.75
NUP85YJR042W CCT8P47079 568 aaKnown RBP4.14□□□□□ -1.75
NUP85YJR042W PEX15Q08215 383 aa4.14□□□□□ -1.75
NUP85YJR042W CUE5Q08412 411 aaKnown RBP4.14□□□□□ -1.75
NUP85YJR042W TY1A-GR1Q12085 440 aa4.14□□□□□ -1.75
NUP85YJR042W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.14□□□□□ -1.75
NUP85YJR042W TY1A-OLQ92392 440 aaKnown RBP4.14□□□□□ -1.75
NUP85YJR042W CPA2P03965 1118 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W GLK1P17709 500 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W RET1P22276 1149 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W CMK1P27466 446 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W CCR4P31384 837 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W DOM34P33309 386 aa4.13□□□□□ -1.75
NUP85YJR042W MTH1P35198 433 aa4.13□□□□□ -1.75
NUP85YJR042W LAM1P38851 1228 aa4.13□□□□□ -1.75
NUP85YJR042W NPR2P39923 615 aa4.13□□□□□ -1.75
NUP85YJR042W YEL068CP39977 110 aa4.13□□□□□ -1.75
NUP85YJR042W FIR1P40020 876 aa4.13□□□□□ -1.75
NUP85YJR042W GCD10P41814 478 aa4.13□□□□□ -1.75
NUP85YJR042W RNR4P49723 345 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W YGR283CP53336 341 aaPredicted RBP4.13□□□□□ -1.75
NUP85YJR042W FRK1Q03002 865 aaPredicted RBP4.13□□□□□ -1.75
NUP85YJR042W ISA1Q07821 250 aaPredicted RBP4.13□□□□□ -1.75
NUP85YJR042W HVG1P0CE11 249 aa4.13□□□□□ -1.75
NUP85YJR042W DAT1P13483 248 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W DBP5P20449 482 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W SYP1P25623 870 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W UGA3P26370 528 aa4.13□□□□□ -1.75
NUP85YJR042W MLS1P30952 554 aa4.13□□□□□ -1.75
NUP85YJR042W SLA1P32790 1244 aa4.13□□□□□ -1.75
NUP85YJR042W SQT1P35184 431 aa4.13□□□□□ -1.75
NUP85YJR042W POP2P39008 433 aa4.13□□□□□ -1.75
NUP85YJR042W YIL166CP40445 542 aa4.13□□□□□ -1.75
NUP85YJR042W YIL165CP40446 119 aa4.13□□□□□ -1.75
NUP85YJR042W HXT16P47185 567 aa4.13□□□□□ -1.75
NUP85YJR042W PUS4P48567 403 aaKnown RBP4.13□□□□□ -1.75
NUP85YJR042W SKY1Q03656 742 aa4.13□□□□□ -1.75
NUP85YJR042W SYF1Q04048 859 aaPredicted RBP4.13□□□□□ -1.75
NUP85YJR042W BLS1Q06071 122 aa4.13□□□□□ -1.75
NUP85YJR042W PMT7Q06644 662 aa4.13□□□□□ -1.75
NUP85YJR042W OMS1Q06668 471 aa4.13□□□□□ -1.75
NUP85YJR042W ESC8Q08119 714 aa4.13□□□□□ -1.75
NUP85YJR042W LAP2Q10740 671 aa4.13□□□□□ -1.75
NUP85YJR042W HFI1Q12060 488 aa4.13□□□□□ -1.75
NUP85YJR042W SNF2P22082 1703 aa4.12□□□□□ -1.75
NUP85YJR042W TUF1P02992 437 aaKnown RBP4.12□□□□□ -1.75
NUP85YJR042W MTF2P10849 440 aa4.12□□□□□ -1.75
NUP85YJR042W SPE2P21182 396 aa4.12□□□□□ -1.75
NUP85YJR042W DAL1P32375 460 aa4.12□□□□□ -1.75
NUP85YJR042W HOG1P32485 435 aa4.12□□□□□ -1.75
NUP85YJR042W YKU70P32807 602 aa4.12□□□□□ -1.75
NUP85YJR042W AIM46P38885 310 aa4.12□□□□□ -1.75
NUP85YJR042W YPL071CQ02864 156 aa4.12□□□□□ -1.75
NUP85YJR042W JIP4Q03361 876 aa4.12□□□□□ -1.75
NUP85YJR042W PRP42Q03776 544 aaKnown RBP4.12□□□□□ -1.75
NUP85YJR042W GSF2Q04697 403 aaKnown RBP4.12□□□□□ -1.75
NUP85YJR042W HAL9Q12180 1030 aa4.12□□□□□ -1.75
NUP85YJR042W SEM1O94742 89 aa4.11□□□□□ -1.75
NUP85YJR042W PHO81P17442 1178 aa4.11□□□□□ -1.75
NUP85YJR042W DBP2P24783 546 aaKnown RBP4.11□□□□□ -1.75
NUP85YJR042W TFB1P32776 642 aa4.11□□□□□ -1.75
NUP85YJR042W YKL100CP34248 587 aa4.11□□□□□ -1.75
NUP85YJR042W IFA38P38286 347 aa4.11□□□□□ -1.75
NUP85YJR042W YBR225WP38321 900 aa4.11□□□□□ -1.75
NUP85YJR042W TOK1P40310 691 aa4.11□□□□□ -1.75
NUP85YJR042W ALF1P53904 254 aa4.11□□□□□ -1.75
NUP85YJR042W TEP1P53916 434 aa4.11□□□□□ -1.75
NUP85YJR042W VID22Q05934 901 aa4.11□□□□□ -1.75
NUP85YJR042W VHS3Q08438 674 aa4.11□□□□□ -1.75
NUP85YJR042W REX3Q12090 404 aa4.11□□□□□ -1.75
NUP85YJR042W SMC6Q12749 1114 aa4.11□□□□□ -1.75
NUP85YJR042W APM4Q99186 491 aa4.11□□□□□ -1.75
NUP85YJR042W BCK1Q01389 1478 aa4.11□□□□□ -1.75
NUP85YJR042W HAP1P0CE41 1502 aa4.11□□□□□ -1.75
NUP85YJR042W LEU1P07264 779 aaKnown RBP4.11□□□□□ -1.75
NUP85YJR042W CDC16P09798 840 aa4.11□□□□□ -1.75
NUP85YJR042W OLE1P21147 510 aaKnown RBP4.11□□□□□ -1.75
NUP85YJR042W REC107P21651 314 aa4.11□□□□□ -1.75
NUP85YJR042W CHL1P22516 861 aaPredicted RBP4.11□□□□□ -1.75
NUP85YJR042W ADP1P25371 1049 aa4.11□□□□□ -1.75
NUP85YJR042W KAP122P32767 1081 aa4.11□□□□□ -1.75
NUP85YJR042W OAF3P36023 863 aa4.11□□□□□ -1.75
NUP85YJR042W VRP1P37370 817 aa4.11□□□□□ -1.75
NUP85YJR042W CCZ1P38273 704 aa4.11□□□□□ -1.75
NUP85YJR042W SSN3P39073 555 aa4.11□□□□□ -1.75
NUP85YJR042W KAP123P40069 1113 aaKnown RBP4.11□□□□□ -1.75
NUP85YJR042W JEM1P40358 645 aa4.11□□□□□ -1.75
NUP85YJR042W SKP2P42843 763 aa4.11□□□□□ -1.75
NUP85YJR042W YGR153WP48238 217 aa4.11□□□□□ -1.75
NUP85YJR042W ELA1P53861 379 aaPredicted RBP4.11□□□□□ -1.75
NUP85YJR042W ATP25Q03153 612 aa4.11□□□□□ -1.75
NUP85YJR042W YMR018WQ04364 514 aa4.11□□□□□ -1.75
NUP85YJR042W SPP382Q06411 708 aaPredicted RBP4.11□□□□□ -1.75
NUP85YJR042W YDR306CQ06640 478 aa4.11□□□□□ -1.75
NUP85YJR042W RIX7Q07844 837 aaKnown RBP4.11□□□□□ -1.75
NUP85YJR042W GUP2Q08929 609 aa4.11□□□□□ -1.75
NUP85YJR042W TAH18Q12181 623 aa4.11□□□□□ -1.75
NUP85YJR042W ARP7Q12406 477 aa4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms