RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W SEC65P29478 273 aa5.48□□□□□ -1.53
YJR028WYJR028W ATG19P35193 415 aa5.48□□□□□ -1.53
YJR028WYJR028W YHR078WP38799 552 aa5.48□□□□□ -1.53
YJR028WYJR028W FOL2P51601 243 aaKnown RBP5.48□□□□□ -1.53
YJR028WYJR028W SPC105P53148 917 aa5.48□□□□□ -1.53
YJR028WYJR028W YGR021WP53212 290 aa5.48□□□□□ -1.53
YJR028WYJR028W CEF1Q03654 590 aaPredicted RBP5.48□□□□□ -1.53
YJR028WYJR028W ATG16Q03818 150 aa5.48□□□□□ -1.53
YJR028WYJR028W VMS1Q04311 632 aaKnown RBP5.48□□□□□ -1.53
YJR028WYJR028W PEX15Q08215 383 aa5.48□□□□□ -1.53
YJR028WYJR028W YPL277CQ08989 487 aa5.48□□□□□ -1.53
YJR028WYJR028W YDL177CQ12257 170 aa5.48□□□□□ -1.53
YJR028WYJR028W CDC6P09119 513 aa5.48□□□□□ -1.53
YJR028WYJR028W YEF3P16521 1044 aaKnown RBP5.48□□□□□ -1.53
YJR028WYJR028W TRX2P22803 104 aaKnown RBP5.48□□□□□ -1.53
YJR028WYJR028W AKL1P38080 1108 aaKnown RBP5.48□□□□□ -1.53
YJR028WYJR028W MLC2Q06580 163 aa5.48□□□□□ -1.53
YJR028WYJR028W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
YJR028WYJR028W PRP4P20053 465 aaKnown RBP5.47□□□□□ -1.53
YJR028WYJR028W GID8P40208 455 aa5.47□□□□□ -1.53
YJR028WYJR028W MET12P46151 657 aa5.47□□□□□ -1.53
YJR028WYJR028W CCT8P47079 568 aaKnown RBP5.47□□□□□ -1.53
YJR028WYJR028W ECM38Q05902 660 aaPredicted RBP5.47□□□□□ -1.53
YJR028WYJR028W CDC26P14724 124 aa5.46□□□□□ -1.54
YJR028WYJR028W YKU70P32807 602 aa5.46□□□□□ -1.54
YJR028WYJR028W YKL133CP36066 463 aa5.46□□□□□ -1.54
YJR028WYJR028W ETP1P38748 585 aaKnown RBP5.46□□□□□ -1.54
YJR028WYJR028W CHA4P43634 648 aa5.46□□□□□ -1.54
YJR028WYJR028W ASI2P53895 289 aa5.46□□□□□ -1.54
YJR028WYJR028W MUS81Q04149 632 aaPredicted RBP5.46□□□□□ -1.54
YJR028WYJR028W MED7Q08278 222 aa5.46□□□□□ -1.54
YJR028WYJR028W TUB3P09734 445 aaKnown RBP5.45□□□□□ -1.54
YJR028WYJR028W SAK1P38990 1142 aa5.45□□□□□ -1.54
YJR028WYJR028W PFA3P42836 336 aa5.45□□□□□ -1.54
YJR028WYJR028W CTH1P47976 325 aa5.45□□□□□ -1.54
YJR028WYJR028W RNR4P49723 345 aaKnown RBP5.45□□□□□ -1.54
YJR028WYJR028W NCS6P53088 359 aa5.45□□□□□ -1.54
YJR028WYJR028W VPS62P53285 467 aa5.45□□□□□ -1.54
YJR028WYJR028W CNM67P53865 581 aaKnown RBP5.45□□□□□ -1.54
YJR028WYJR028W SLU7Q02775 382 aaKnown RBP5.45□□□□□ -1.54
YJR028WYJR028W SVL3Q03088 825 aaKnown RBP5.45□□□□□ -1.54
YJR028WYJR028W ECM16Q04217 1267 aaKnown RBP5.45□□□□□ -1.54
YJR028WYJR028W DUS4Q06063 367 aa5.45□□□□□ -1.54
YJR028WYJR028W SGD1Q06132 899 aa5.45□□□□□ -1.54
YJR028WYJR028W HMI1Q12039 706 aa5.45□□□□□ -1.54
YJR028WYJR028W HIS5P07172 385 aa5.44□□□□□ -1.54
YJR028WYJR028W KTR4P38131 464 aa5.44□□□□□ -1.54
YJR028WYJR028W YHL041WP38730 149 aa5.44□□□□□ -1.54
YJR028WYJR028W LAM1P38851 1228 aa5.44□□□□□ -1.54
YJR028WYJR028W SET2P46995 733 aaKnown RBP5.44□□□□□ -1.54
YJR028WYJR028W NOP15P53927 220 aaPredicted RBP5.44□□□□□ -1.54
YJR028WYJR028W CEG1Q01159 459 aaPredicted RBP5.44□□□□□ -1.54
YJR028WYJR028W ROT1Q03691 256 aa5.44□□□□□ -1.54
YJR028WYJR028W YLR407WQ06070 228 aa5.44□□□□□ -1.54
YJR028WYJR028W MSS18P08593 268 aa5.43□□□□□ -1.54
YJR028WYJR028W SED4P25365 1065 aa5.43□□□□□ -1.54
YJR028WYJR028W SEC21P32074 935 aaKnown RBP5.43□□□□□ -1.54
YJR028WYJR028W PUB1P32588 453 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
YJR028WYJR028W TOS1P38288 455 aa5.43□□□□□ -1.54
YJR028WYJR028W YHR202WP38887 602 aa5.43□□□□□ -1.54
YJR028WYJR028W HIS6P40545 261 aa5.43□□□□□ -1.54
YJR028WYJR028W VID28P40547 921 aa5.43□□□□□ -1.54
YJR028WYJR028W IES1P43579 692 aa5.43□□□□□ -1.54
YJR028WYJR028W MTR3P48240 250 aaPredicted RBP5.43□□□□□ -1.54
YJR028WYJR028W GCV2P49095 1034 aa5.43□□□□□ -1.54
YJR028WYJR028W GPD1Q00055 391 aaKnown RBP5.43□□□□□ -1.54
YJR028WYJR028W PUS1Q12211 544 aaKnown RBP5.43□□□□□ -1.54
YJR028WYJR028W GLN4P13188 809 aaKnown RBP5.42□□□□□ -1.54
YJR028WYJR028W APA1P16550 321 aaKnown RBP5.42□□□□□ -1.54
YJR028WYJR028W HOP1P20050 605 aa5.42□□□□□ -1.54
YJR028WYJR028W HCA4P20448 770 aaKnown RBP5.42□□□□□ -1.54
YJR028WYJR028W APN2P38207 520 aa5.42□□□□□ -1.54
YJR028WYJR028W RIM4P38741 713 aa5.42□□□□□ -1.54
YJR028WYJR028W MSS4P38994 779 aa5.42□□□□□ -1.54
YJR028WYJR028W MEF2P39677 819 aa5.42□□□□□ -1.54
YJR028WYJR028W PZF1P39933 429 aa5.42□□□□□ -1.54
YJR028WYJR028W IRC5P43610 853 aa5.42□□□□□ -1.54
YJR028WYJR028W PUS4P48567 403 aaKnown RBP5.42□□□□□ -1.54
YJR028WYJR028W GTF1P53260 183 aaPredicted RBP5.42□□□□□ -1.54
YJR028WYJR028W VPS72Q03388 795 aa5.42□□□□□ -1.54
YJR028WYJR028W YDR132CQ03900 495 aa5.42□□□□□ -1.54
YJR028WYJR028W BRE1Q07457 700 aaKnown RBP5.42□□□□□ -1.54
YJR028WYJR028W YLR415CO13578 112 aa5.41□□□□□ -1.54
YJR028WYJR028W RPS17AP02407 136 aaKnown RBP5.41□□□□□ -1.54
YJR028WYJR028W RPP2AP05319 106 aaKnown RBP5.41□□□□□ -1.54
YJR028WYJR028W RPS17BP14127 136 aaKnown RBP5.41□□□□□ -1.54
YJR028WYJR028W EMC1P25574 760 aa5.41□□□□□ -1.54
YJR028WYJR028W IMG2P25642 146 aaPredicted RBP5.41□□□□□ -1.54
YJR028WYJR028W MF(ALPHA)2P32435 120 aa5.41□□□□□ -1.54
YJR028WYJR028W HXT4P32467 576 aa5.41□□□□□ -1.54
YJR028WYJR028W YPT7P32939 208 aa5.41□□□□□ -1.54
YJR028WYJR028W SIC1P38634 284 aa5.41□□□□□ -1.54
YJR028WYJR028W VHR1P40522 640 aa5.41□□□□□ -1.54
YJR028WYJR028W QRI7P43122 407 aa5.41□□□□□ -1.54
YJR028WYJR028W BFA1P47113 574 aa5.41□□□□□ -1.54
YJR028WYJR028W SNO2P53823 222 aa5.41□□□□□ -1.54
YJR028WYJR028W ORC4P54791 529 aa5.41□□□□□ -1.54
YJR028WYJR028W YPS7Q06325 596 aa5.41□□□□□ -1.54
YJR028WYJR028W YDL121CQ07541 149 aa5.41□□□□□ -1.54
YJR028WYJR028W BRE4Q07660 1125 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms