RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	SHQ1	P40486	507 aa	Predicted RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	VPS53	P47061	822 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	YJR008W	P47085	338 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	ILM1	P47155	203 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	SIW14	P53965	281 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	HXT15	P54854	567 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	OYE2	Q03558	400 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	YLR287C	Q05881	355 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	NOP6	Q07623	225 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	SUP35	P05453	685 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	RPL22A	P05749	121 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	GCR1	P07261	785 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	SAM35	P14693	329 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	KRS1	P15180	591 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	SPO12	P17123	173 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	GAL11	P19659	1081 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	URA1	P28272	314 aa	Predicted RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	PAP1	P29468	568 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	YKR018C	P36114	725 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	YMR147W	P40218	223 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	HUL5	P53119	910 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	ERG5	P54781	538 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	MAK10	Q02197	733 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	SSY1	Q03770	852 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	PSR2	Q07949	397 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	HRK1	Q08732	759 aa	Known RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	DCS2	Q12123	353 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	SNU66	Q12420	587 aa	Predicted RBP	4.72	□□□□□ -1.65
XKS1	YGR194C	NBL1	Q3E7Y6	73 aa		4.72	□□□□□ -1.65
XKS1	YGR194C	DED1	P06634	604 aa	Known RBP	4.71	□□□□□ -1.66
XKS1	YGR194C	MRPS28	P21771	286 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	ARG1	P22768	420 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	RAD57	P25301	460 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	ADP1	P25371	1049 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	DPH5	P32469	300 aa	Predicted RBP	4.71	□□□□□ -1.66
XKS1	YGR194C	HOS4	P40480	1083 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	EFM4	P40516	257 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	YJL045W	P47052	634 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	YNL193W	P53870	558 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	ORC3	P54790	616 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	ROD1	Q02805	837 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	MRL1	Q06815	381 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	YLR001C	Q07895	862 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	CMS1	Q07897	291 aa	Known RBP	4.71	□□□□□ -1.66
XKS1	YGR194C	SLM3	Q12093	417 aa		4.71	□□□□□ -1.66
XKS1	YGR194C	SSF2	Q12153	453 aa	Predicted RBP	4.71	□□□□□ -1.66
XKS1	YGR194C	SEC18	P18759	758 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	BMH1	P29311	267 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	PRO1	P32264	428 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	PUP2	P32379	260 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	PDB1	P32473	366 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	MKK2	P32491	506 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	RAD5	P32849	1169 aa	Predicted RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
XKS1	YGR194C	LRG1	P35688	1017 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	ALG3	P38179	458 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	OLA1	P38219	394 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	MIP6	P38760	659 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	MRX1	P40050	688 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	ENP2	P48234	707 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	YGR237C	P50089	785 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	ADA2	Q02336	434 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	UME1	Q03010	460 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	YMR114C	Q04471	368 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	RRI2	Q12348	645 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	LPX1	Q12405	387 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	RMP1	Q12530	201 aa		4.7	□□□□□ -1.66
XKS1	YGR194C	URB1	P34241	1764 aa	Known RBP	4.7	□□□□□ -1.66
XKS1	YGR194C	CKI1	P20485	582 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	CBP3	P21560	335 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	CLB4	P24871	460 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	SWI4	P25302	1093 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	PSO2	P30620	661 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	HSP78	P33416	811 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	LOS1	P33418	1100 aa	Predicted RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	YHL012W	P38709	493 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	PTC7	P38797	343 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	PXA1	P41909	870 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	CUE3	P53137	624 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	ZPR1	P53303	486 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	PXR1	P53335	271 aa	Predicted RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	ADE16	P54113	591 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	SEC5	P89102	971 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	RAT1	Q02792	1006 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	RMT2	Q03305	412 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	EBS1	Q03466	884 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	GET3	Q12154	354 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	PTC5	Q12511	572 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	TOM70	P07213	617 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	CDC6	P09119	513 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	VPS1	P21576	704 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	SPO11	P23179	398 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	CDC10	P25342	322 aa	Known RBP	4.69	□□□□□ -1.66
XKS1	YGR194C	BUD14	P27637	709 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	KIP1	P28742	1111 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	CDC11	P32458	415 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	PEP7	P32609	515 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	RER2	P35196	286 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	RPC25	P35718	212 aa		4.69	□□□□□ -1.66
XKS1	YGR194C	POL12	P38121	705 aa	Predicted RBP	4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 84 ms