RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C YLL054CQ12244 843 aa7.87□□□□□ -1.15
NUP57YGR119C MET6P05694 767 aaKnown RBP7.86□□□□□ -1.15
NUP57YGR119C YKL091CP33324 310 aaKnown RBP7.86□□□□□ -1.15
NUP57YGR119C MCX1P38323 520 aaPredicted RBP7.86□□□□□ -1.15
NUP57YGR119C AIP1P46680 615 aaKnown RBP7.86□□□□□ -1.15
NUP57YGR119C YGL138CP53122 345 aa7.86□□□□□ -1.15
NUP57YGR119C NAN1Q02931 896 aaKnown RBP7.86□□□□□ -1.15
NUP57YGR119C SYF1Q04048 859 aaPredicted RBP7.86□□□□□ -1.15
NUP57YGR119C GYL1Q04322 720 aa7.86□□□□□ -1.15
NUP57YGR119C MYO5Q04439 1219 aaKnown RBP7.86□□□□□ -1.15
NUP57YGR119C ATG23Q06671 453 aa7.86□□□□□ -1.15
NUP57YGR119C TIP41Q12199 356 aa7.86□□□□□ -1.15
NUP57YGR119C RIT1P23796 513 aa7.85□□□□□ -1.15
NUP57YGR119C ERT1P38140 529 aa7.85□□□□□ -1.15
NUP57YGR119C MIP6P38760 659 aaKnown RBP7.85□□□□□ -1.15
NUP57YGR119C YAR028WP39548 234 aa7.85□□□□□ -1.15
NUP57YGR119C SHQ1P40486 507 aaPredicted RBP7.85□□□□□ -1.15
NUP57YGR119C RTC4P53850 401 aa7.85□□□□□ -1.15
NUP57YGR119C YLR225CQ05948 407 aaKnown RBP7.85□□□□□ -1.15
NUP57YGR119C SPP382Q06411 708 aaPredicted RBP7.85□□□□□ -1.15
NUP57YGR119C VAC14Q06708 880 aa7.85□□□□□ -1.15
NUP57YGR119C BDF2Q07442 638 aa7.85□□□□□ -1.15
NUP57YGR119C RRP6Q12149 733 aaKnown RBP7.85□□□□□ -1.15
NUP57YGR119C FLO1P32768 1537 aa7.85□□□□□ -1.15
NUP57YGR119C AI1P03875 834 aa7.85□□□□□ -1.15
NUP57YGR119C MTF2P10849 440 aa7.85□□□□□ -1.15
NUP57YGR119C EFM4P40516 257 aa7.85□□□□□ -1.15
NUP57YGR119C RPT4P53549 437 aaKnown RBP7.85□□□□□ -1.15
NUP57YGR119C IRC4Q03036 179 aa7.85□□□□□ -1.15
NUP57YGR119C YDR341CQ05506 607 aaKnown RBP7.85□□□□□ -1.15
NUP57YGR119C YLR287CQ05881 355 aa7.85□□□□□ -1.15
NUP57YGR119C AVO1Q08236 1176 aa7.85□□□□□ -1.15
NUP57YGR119C YOR223WQ12015 292 aa7.85□□□□□ -1.15
NUP57YGR119C INO1P11986 533 aa7.84□□□□□ -1.15
NUP57YGR119C LCB1P25045 558 aaKnown RBP7.84□□□□□ -1.15
NUP57YGR119C AGP1P25376 633 aa7.84□□□□□ -1.15
NUP57YGR119C PSO2P30620 661 aa7.84□□□□□ -1.15
NUP57YGR119C PRO3P32263 286 aaKnown RBP7.84□□□□□ -1.15
NUP57YGR119C ALG3P38179 458 aa7.84□□□□□ -1.15
NUP57YGR119C CNN1P43618 361 aa7.84□□□□□ -1.15
NUP57YGR119C HFM1P51979 1187 aa7.84□□□□□ -1.15
NUP57YGR119C YGR045CP53229 120 aa7.84□□□□□ -1.15
NUP57YGR119C NEW1Q08972 1196 aaKnown RBP7.84□□□□□ -1.15
NUP57YGR119C OSH2Q12451 1283 aa7.84□□□□□ -1.15
NUP57YGR119C RAD61Q99359 647 aa7.84□□□□□ -1.15
NUP57YGR119C STI1P15705 589 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
NUP57YGR119C SPO12P17123 173 aa7.83□□□□□ -1.16
NUP57YGR119C DBP5P20449 482 aaKnown RBP7.83□□□□□ -1.16
NUP57YGR119C MDL2P33311 773 aa7.83□□□□□ -1.16
NUP57YGR119C MCM7P38132 845 aa7.83□□□□□ -1.16
NUP57YGR119C ERG7P38604 731 aa7.83□□□□□ -1.16
NUP57YGR119C VFA1P40080 203 aa7.83□□□□□ -1.16
NUP57YGR119C HUL4P40985 892 aa7.83□□□□□ -1.16
NUP57YGR119C CTK3P46963 296 aaPredicted RBP7.83□□□□□ -1.16
NUP57YGR119C TIM54P47045 478 aa7.83□□□□□ -1.16
NUP57YGR119C YGR153WP48238 217 aa7.83□□□□□ -1.16
NUP57YGR119C HUL5P53119 910 aa7.83□□□□□ -1.16
NUP57YGR119C ELA1P53861 379 aaPredicted RBP7.83□□□□□ -1.16
NUP57YGR119C SQS1P53866 767 aaKnown RBP7.83□□□□□ -1.16
NUP57YGR119C KIN4Q01919 800 aa7.83□□□□□ -1.16
NUP57YGR119C GAS5Q08193 484 aa7.83□□□□□ -1.16
NUP57YGR119C TY1A-NL1Q12391 440 aaKnown RBP7.83□□□□□ -1.16
NUP57YGR119C YOL087CQ99247 1116 aa7.83□□□□□ -1.16
NUP57YGR119C RAD57P25301 460 aa7.82□□□□□ -1.16
NUP57YGR119C TRK2P28584 889 aa7.82□□□□□ -1.16
NUP57YGR119C MUD2P36084 527 aaKnown RBP7.82□□□□□ -1.16
NUP57YGR119C BYE1P36106 594 aa7.82□□□□□ -1.16
NUP57YGR119C VID27P40157 782 aa7.82□□□□□ -1.16
NUP57YGR119C YFH7P43591 353 aa7.82□□□□□ -1.16
NUP57YGR119C YMR102CQ03177 834 aa7.82□□□□□ -1.16
NUP57YGR119C DOT1Q04089 582 aaKnown RBP7.82□□□□□ -1.16
NUP57YGR119C YAP7Q08182 245 aa7.82□□□□□ -1.16
NUP57YGR119C LAP2Q10740 671 aa7.82□□□□□ -1.16
NUP57YGR119C CIT1P00890 479 aa7.81□□□□□ -1.16
NUP57YGR119C SNF3P10870 884 aa7.81□□□□□ -1.16
NUP57YGR119C PUF4P25339 888 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
NUP57YGR119C SBA1P28707 216 aaKnown RBP7.81□□□□□ -1.16
NUP57YGR119C STE5P32917 917 aa7.81□□□□□ -1.16
NUP57YGR119C GDT1P38301 280 aaPredicted RBP7.81□□□□□ -1.16
NUP57YGR119C SMF1P38925 575 aa7.81□□□□□ -1.16
NUP57YGR119C STT3P39007 718 aaKnown RBP7.81□□□□□ -1.16
NUP57YGR119C RPT6Q01939 405 aaKnown RBP7.81□□□□□ -1.16
NUP57YGR119C UME1Q03010 460 aa7.81□□□□□ -1.16
NUP57YGR119C OMS1Q06668 471 aa7.81□□□□□ -1.16
NUP57YGR119C YPL260WQ08977 551 aa7.81□□□□□ -1.16
NUP57YGR119C YPL066WQ12194 479 aa7.81□□□□□ -1.16
NUP57YGR119C THR4P16120 514 aaKnown RBP7.81□□□□□ -1.16
NUP57YGR119C KRE2P27809 442 aa7.81□□□□□ -1.16
NUP57YGR119C RPC25P35718 212 aa7.81□□□□□ -1.16
NUP57YGR119C VBA5P36172 582 aa7.81□□□□□ -1.16
NUP57YGR119C PFF1P38244 976 aa7.81□□□□□ -1.16
NUP57YGR119C RGD1P38339 666 aa7.81□□□□□ -1.16
NUP57YGR119C ECM1P39715 212 aa7.81□□□□□ -1.16
NUP57YGR119C UBA2P52488 636 aa7.81□□□□□ -1.16
NUP57YGR119C PIP2P52960 996 aa7.81□□□□□ -1.16
NUP57YGR119C NGL3Q03210 505 aa7.81□□□□□ -1.16
NUP57YGR119C YOL075CQ08234 1294 aa7.81□□□□□ -1.16
NUP57YGR119C RMP1Q12530 201 aa7.81□□□□□ -1.16
NUP57YGR119C PMD1P32634 1753 aa7.81□□□□□ -1.16
NUP57YGR119C CKI1P20485 582 aa7.8□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 120.2 ms