RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W ATG17Q06410 417 aa5.3□□□□□ -1.56
CDC4YFL009W OXR1Q08952 273 aa5.3□□□□□ -1.56
CDC4YFL009W RPC19P28000 142 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W URA1P28272 314 aaPredicted RBP5.3□□□□□ -1.56
CDC4YFL009W PYC2P32327 1180 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W RIB7P33312 244 aa5.3□□□□□ -1.56
CDC4YFL009W SIP3P38717 1229 aa5.3□□□□□ -1.56
CDC4YFL009W SIP5P40210 489 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W YIL165CP40446 119 aa5.3□□□□□ -1.56
CDC4YFL009W LAM5P43560 674 aa5.3□□□□□ -1.56
CDC4YFL009W FAA4P47912 694 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W GNP1P48813 663 aa5.3□□□□□ -1.56
CDC4YFL009W YGR237CP50089 785 aa5.3□□□□□ -1.56
CDC4YFL009W NUT1P53114 1132 aa5.3□□□□□ -1.56
CDC4YFL009W CUE3P53137 624 aaKnown RBP5.3□□□□□ -1.56
CDC4YFL009W MDR1P53258 950 aa5.3□□□□□ -1.56
CDC4YFL009W YNL144CP53907 740 aa5.3□□□□□ -1.56
CDC4YFL009W ULP1Q02724 621 aa5.3□□□□□ -1.56
CDC4YFL009W BUD7Q08754 746 aa5.3□□□□□ -1.56
CDC4YFL009W CIT2P08679 460 aa5.29□□□□□ -1.56
CDC4YFL009W HEM13P11353 328 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W PRP4P20053 465 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W ITR2P30606 609 aa5.29□□□□□ -1.56
CDC4YFL009W HIR2P32480 875 aa5.29□□□□□ -1.56
CDC4YFL009W CBF2P32504 956 aa5.29□□□□□ -1.56
CDC4YFL009W OSH3P38713 996 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W YHL008CP38750 627 aa5.29□□□□□ -1.56
CDC4YFL009W FIR1P40020 876 aa5.29□□□□□ -1.56
CDC4YFL009W DAS1P47005 663 aa5.29□□□□□ -1.56
CDC4YFL009W COP1P53622 1201 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W UME1Q03010 460 aa5.29□□□□□ -1.56
CDC4YFL009W ERB1Q04660 807 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W SOV1Q04748 898 aa5.29□□□□□ -1.56
CDC4YFL009W YLH47Q06493 454 aa5.29□□□□□ -1.56
CDC4YFL009W NEW1Q08972 1196 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W RIB2Q12362 591 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W REP1P03871 373 aa5.29□□□□□ -1.56
CDC4YFL009W SNA3P14359 133 aa5.29□□□□□ -1.56
CDC4YFL009W CDC34P14682 295 aa5.29□□□□□ -1.56
CDC4YFL009W SPO11P23179 398 aa5.29□□□□□ -1.56
CDC4YFL009W YCR051WP25631 222 aa5.29□□□□□ -1.56
CDC4YFL009W NIP100P33420 868 aa5.29□□□□□ -1.56
CDC4YFL009W OAF3P36023 863 aa5.29□□□□□ -1.56
CDC4YFL009W FES1P38260 290 aa5.29□□□□□ -1.56
CDC4YFL009W FZO1P38297 855 aa5.29□□□□□ -1.56
CDC4YFL009W YJR039WP47107 1121 aa5.29□□□□□ -1.56
CDC4YFL009W YGR053CP53234 283 aa5.29□□□□□ -1.56
CDC4YFL009W EBS1Q03466 884 aaKnown RBP5.29□□□□□ -1.56
CDC4YFL009W HFD1Q04458 532 aa5.29□□□□□ -1.56
CDC4YFL009W SCM3Q12334 223 aa5.29□□□□□ -1.56
CDC4YFL009W SSK22P25390 1331 aaPredicted RBP5.28□□□□□ -1.56
CDC4YFL009W FAR1P21268 830 aa5.28□□□□□ -1.56
CDC4YFL009W SIN4P32259 974 aa5.28□□□□□ -1.56
CDC4YFL009W RME1P32338 300 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W NPL6P32832 435 aa5.28□□□□□ -1.56
CDC4YFL009W YKL069WP36088 180 aa5.28□□□□□ -1.56
CDC4YFL009W CCT2P39076 527 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W YNR029CP53729 429 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W SQS1P53866 767 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W COG6P53959 839 aa5.28□□□□□ -1.56
CDC4YFL009W VTI1Q04338 217 aa5.28□□□□□ -1.56
CDC4YFL009W TAF9Q05027 157 aa5.28□□□□□ -1.56
CDC4YFL009W ALE1Q08548 619 aa5.28□□□□□ -1.56
CDC4YFL009W ADH4P10127 382 aa5.28□□□□□ -1.56
CDC4YFL009W PFK2P16862 959 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
CDC4YFL009W CLN2P20438 545 aa5.28□□□□□ -1.56
CDC4YFL009W VPS1P21576 704 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W STE13P33894 931 aa5.28□□□□□ -1.56
CDC4YFL009W AHP1P38013 176 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W SPP381P38282 291 aaPredicted RBP5.28□□□□□ -1.56
CDC4YFL009W MIP6P38760 659 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W AIM46P38885 310 aa5.28□□□□□ -1.56
CDC4YFL009W RPN10P38886 268 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W SPC72P39723 622 aa5.28□□□□□ -1.56
CDC4YFL009W MON1P53129 644 aa5.28□□□□□ -1.56
CDC4YFL009W LSC2P53312 427 aa5.28□□□□□ -1.56
CDC4YFL009W CIK1Q01649 594 aa5.28□□□□□ -1.56
CDC4YFL009W VPS64Q03944 604 aa5.28□□□□□ -1.56
CDC4YFL009W PLP1Q04004 230 aa5.28□□□□□ -1.56
CDC4YFL009W SXM1Q04175 944 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W CSR1Q06705 408 aaKnown RBP5.28□□□□□ -1.56
CDC4YFL009W GPR1Q12361 961 aa5.28□□□□□ -1.56
CDC4YFL009W CDC6P09119 513 aa5.27□□□□□ -1.57
CDC4YFL009W MSB1P21339 1137 aaKnown RBP5.27□□□□□ -1.57
CDC4YFL009W CBP3P21560 335 aa5.27□□□□□ -1.57
CDC4YFL009W OPI1P21957 404 aa5.27□□□□□ -1.57
CDC4YFL009W VMA4P22203 233 aaKnown RBP5.27□□□□□ -1.57
CDC4YFL009W BUD23P25627 275 aaPredicted RBP5.27□□□□□ -1.57
CDC4YFL009W RPC34P32910 317 aa5.27□□□□□ -1.57
CDC4YFL009W PTH2P34222 208 aa5.27□□□□□ -1.57
CDC4YFL009W YKR015CP36111 568 aa5.27□□□□□ -1.57
CDC4YFL009W YBR062CP38239 180 aa5.27□□□□□ -1.57
CDC4YFL009W RIM11P38615 370 aa5.27□□□□□ -1.57
CDC4YFL009W YJR008WP47085 338 aa5.27□□□□□ -1.57
CDC4YFL009W ADE16P54113 591 aaKnown RBP5.27□□□□□ -1.57
CDC4YFL009W ADI1Q03677 179 aa5.27□□□□□ -1.57
CDC4YFL009W URH1Q04179 340 aa5.27□□□□□ -1.57
CDC4YFL009W YMR114CQ04471 368 aaKnown RBP5.27□□□□□ -1.57
CDC4YFL009W PSR1Q07800 427 aa5.27□□□□□ -1.57
CDC4YFL009W GCR1P07261 785 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms