RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YKL050C	P35736	922 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
VMA1	YDL185W	PCF11	P39081	626 aa	Predicted RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	UBP5	P39944	805 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	RIC1	P40395	1056 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	CAB2	P40506	365 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	NOP9	P47077	666 aa	Known RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	UBP15	P50101	1230 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	YGR016W	P53209	190 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	SDA1	P53313	767 aa	Known RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	UBX4	P54730	416 aa		4.22	□□□□□ -1.73
VMA1	YDL185W	SUB2	Q07478	446 aa	Known RBP	4.22	□□□□□ -1.73
VMA1	YDL185W	SSB1	P11484	613 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	SEC63	P14906	663 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	CBF1	P17106	351 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	UBA1	P22515	1024 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
VMA1	YDL185W	ECM2	P38241	364 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	SSB2	P40150	613 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	DPH1	P40487	425 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	ATP22	P50273	684 aa	Predicted RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	ZIP2	P53061	704 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	COP1	P53622	1201 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	TOF1	P53840	1238 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	FMP42	Q04991	504 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	CDC53	Q12018	815 aa	Known RBP	4.21	□□□□□ -1.73
VMA1	YDL185W	BUG1	Q12191	341 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	TIP41	Q12199	356 aa		4.21	□□□□□ -1.73
VMA1	YDL185W	HIS3	P06633	220 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	ERG12	P07277	443 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	GSY1	P23337	708 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	UBP13	P38187	747 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	PFF1	P38244	976 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	ESF2	P53743	316 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	RPL34A	P87262	121 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	GPI17	Q04080	534 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	GIS4	Q04233	774 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	BBP1	Q12365	385 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	PGK1	P00560	416 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	TRP2	P00899	507 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	MET6	P05694	767 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	ARG82	P07250	355 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	ARG8	P18544	423 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	FAR1	P21268	830 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	URE2	P23202	354 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	SMC1	P32908	1225 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	MAP2	P38174	421 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	SLM4	P38247	162 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	ATG14	P38270	344 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	DIA4	P38705	446 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	THI6	P41835	540 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	XKS1	P42826	600 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	YGR021W	P53212	290 aa		4.21	□□□□□ -1.74
VMA1	YDL185W	UTP6	Q02354	440 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	CFT2	Q12102	859 aa	Predicted RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	DBP10	Q12389	995 aa	Known RBP	4.21	□□□□□ -1.74
VMA1	YDL185W	GCN3	P14741	305 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	RPC53	P25441	422 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	HSP78	P33416	811 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	COY1	P34237	679 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	HCS1	P34243	683 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	YBP1	P38315	674 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	PFK26	P40433	827 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	MKT1	P40850	830 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	MIG2	P53035	382 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	LSG1	P53145	640 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	YGR266W	P53326	701 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	TMA20	P89886	181 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	PTA1	Q01329	785 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
VMA1	YDL185W	GDE1	Q02979	1223 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	SMP3	Q04174	516 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	RRP9	Q06506	573 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	UIP4	Q08926	304 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	TYW1	Q08960	810 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	SAM3	Q08986	587 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	FAP7	Q12055	197 aa	Predicted RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	SLM3	Q12093	417 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	COX6	P00427	148 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	REP1	P03871	373 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	TUB1	P09733	447 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	HSF1	P10961	833 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	MSS116	P15424	664 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	POL30	P15873	258 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	MEF1	P25039	761 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	ACH1	P32316	526 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	GYP6	P32806	458 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	TRM2	P33753	639 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	TPO5	P36029	618 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	YBL036C	P38197	257 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	BNA3	P47039	444 aa	Known RBP	4.2	□□□□□ -1.74
VMA1	YDL185W	SGM1	P47166	707 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	YGR153W	P48238	217 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	UBA2	P52488	636 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	SWP1	Q02795	286 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	YIG1	Q08956	461 aa		4.2	□□□□□ -1.74
VMA1	YDL185W	YLR462W	O13556	202 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	MIP1	P15801	1254 aa		4.19	□□□□□ -1.74
VMA1	YDL185W	OM45	P16547	393 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms