RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W DPB3P27344 201 aa6.39□□□□□ -1.39
ATG4YNL223W CDC11P32458 415 aa6.39□□□□□ -1.39
ATG4YNL223W DPH2P32461 534 aa6.39□□□□□ -1.39
ATG4YNL223W YEL043WP32618 956 aa6.39□□□□□ -1.39
ATG4YNL223W PIN4P34217 668 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
ATG4YNL223W KIC1P38692 1080 aa6.39□□□□□ -1.39
ATG4YNL223W SMF1P38925 575 aa6.39□□□□□ -1.39
ATG4YNL223W ACF4P47129 309 aa6.39□□□□□ -1.39
ATG4YNL223W VPS70P47161 811 aa6.39□□□□□ -1.39
ATG4YNL223W ASN1P49089 572 aaKnown RBP6.39□□□□□ -1.39
ATG4YNL223W SHE10P53075 577 aa6.39□□□□□ -1.39
ATG4YNL223W CUL3P53202 744 aa6.39□□□□□ -1.39
ATG4YNL223W MAL13P53338 473 aa6.39□□□□□ -1.39
ATG4YNL223W YDR090CQ03193 310 aa6.39□□□□□ -1.39
ATG4YNL223W YML082WQ04533 649 aaKnown RBP6.39□□□□□ -1.39
ATG4YNL223W ECM7Q06200 448 aa6.39□□□□□ -1.39
ATG4YNL223W ERG11P10614 530 aa6.38□□□□□ -1.39
ATG4YNL223W COQ8P27697 501 aa6.38□□□□□ -1.39
ATG4YNL223W TMT1P32643 299 aa6.38□□□□□ -1.39
ATG4YNL223W SMY2P32909 740 aaKnown RBP6.38□□□□□ -1.39
ATG4YNL223W TRZ1P36159 838 aaPredicted RBP6.38□□□□□ -1.39
ATG4YNL223W GUA1P38625 525 aaKnown RBP6.38□□□□□ -1.39
ATG4YNL223W YGR021WP53212 290 aa6.38□□□□□ -1.39
ATG4YNL223W BTN2P53286 410 aa6.38□□□□□ -1.39
ATG4YNL223W HIF1Q12373 385 aa6.38□□□□□ -1.39
ATG4YNL223W NOP14Q99207 810 aaKnown RBP6.38□□□□□ -1.39
ATG4YNL223W CDC42P19073 191 aa6.37□□□□□ -1.39
ATG4YNL223W IME1P21190 360 aa6.37□□□□□ -1.39
ATG4YNL223W VID24P38263 362 aa6.37□□□□□ -1.39
ATG4YNL223W SAD1P43589 448 aa6.37□□□□□ -1.39
ATG4YNL223W JJJ3P47138 172 aa6.37□□□□□ -1.39
ATG4YNL223W CLA4P48562 842 aa6.37□□□□□ -1.39
ATG4YNL223W PRP31P49704 494 aaPredicted RBP6.37□□□□□ -1.39
ATG4YNL223W MNP1P53163 194 aaPredicted RBP6.37□□□□□ -1.39
ATG4YNL223W RPA49Q01080 415 aaPredicted RBP6.37□□□□□ -1.39
ATG4YNL223W SYH1Q02875 849 aaKnown RBP6.37□□□□□ -1.39
ATG4YNL223W TRS130Q03660 1102 aa6.37□□□□□ -1.39
ATG4YNL223W PPM1Q04081 328 aa6.37□□□□□ -1.39
ATG4YNL223W POB3Q04636 552 aaKnown RBP6.37□□□□□ -1.39
ATG4YNL223W RGA2Q06407 1009 aa6.37□□□□□ -1.39
ATG4YNL223W HFI1Q12060 488 aa6.37□□□□□ -1.39
ATG4YNL223W TOM1Q03280 3268 aa6.36□□□□□ -1.39
ATG4YNL223W SNF1P06782 633 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W SPT2P06843 333 aaPredicted RBP6.36□□□□□ -1.39
ATG4YNL223W CDC33P07260 213 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W NAT1P12945 854 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W PAP1P29468 568 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W SWI3P32591 825 aa6.36□□□□□ -1.39
ATG4YNL223W BCS1P32839 456 aa6.36□□□□□ -1.39
ATG4YNL223W YKL050CP35736 922 aa6.36□□□□□ -1.39
ATG4YNL223W FTR1P40088 404 aa6.36□□□□□ -1.39
ATG4YNL223W SCD6P45978 349 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
ATG4YNL223W CPR7P47103 393 aa6.36□□□□□ -1.39
ATG4YNL223W TPO2P53283 614 aa6.36□□□□□ -1.39
ATG4YNL223W TBF1Q02457 562 aa6.36□□□□□ -1.39
ATG4YNL223W DIG1Q03063 452 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W MSC2Q03455 724 aa6.36□□□□□ -1.39
ATG4YNL223W YML020WQ03722 664 aa6.36□□□□□ -1.39
ATG4YNL223W RRB1Q04225 511 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W IWR1Q07532 353 aaPredicted RBP6.36□□□□□ -1.39
ATG4YNL223W ICL2Q12031 575 aa6.36□□□□□ -1.39
ATG4YNL223W GIS3Q12418 502 aa6.36□□□□□ -1.39
ATG4YNL223W AIR2Q12476 344 aaKnown RBP6.36□□□□□ -1.39
ATG4YNL223W ATG11Q12527 1178 aa6.36□□□□□ -1.39
ATG4YNL223W GFA1P14742 717 aaKnown RBP6.35□□□□□ -1.39
ATG4YNL223W SCJ1P25303 377 aa6.35□□□□□ -1.39
ATG4YNL223W DAL2P25335 343 aa6.35□□□□□ -1.39
ATG4YNL223W PTC3P34221 468 aaKnown RBP6.35□□□□□ -1.39
ATG4YNL223W RRP1P35178 278 aaPredicted RBP6.35□□□□□ -1.39
ATG4YNL223W GPT2P36148 743 aa6.35□□□□□ -1.39
ATG4YNL223W MMS4P38257 691 aa6.35□□□□□ -1.39
ATG4YNL223W EXO5P38289 585 aa6.35□□□□□ -1.39
ATG4YNL223W SKP2P42843 763 aa6.35□□□□□ -1.39
ATG4YNL223W DAS1P47005 663 aa6.35□□□□□ -1.39
ATG4YNL223W TCB2P48231 1178 aa6.35□□□□□ -1.39
ATG4YNL223W KAP114P53067 1004 aa6.35□□□□□ -1.39
ATG4YNL223W BRE5P53741 515 aaKnown RBP6.35□□□□□ -1.39
ATG4YNL223W YMR018WQ04364 514 aa6.35□□□□□ -1.39
ATG4YNL223W YMR114CQ04471 368 aaKnown RBP6.35□□□□□ -1.39
ATG4YNL223W SRF1Q12516 437 aa6.35□□□□□ -1.39
ATG4YNL223W WHI2P12611 486 aa6.34□□□□□ -1.39
ATG4YNL223W SNA3P14359 133 aa6.34□□□□□ -1.39
ATG4YNL223W SEC21P32074 935 aaKnown RBP6.34□□□□□ -1.39
ATG4YNL223W CBF2P32504 956 aa6.34□□□□□ -1.39
ATG4YNL223W LTV1P34078 463 aa6.34□□□□□ -1.39
ATG4YNL223W CSG2P35206 410 aa6.34□□□□□ -1.39
ATG4YNL223W BLI1P35727 113 aa6.34□□□□□ -1.39
ATG4YNL223W BYE1P36106 594 aa6.34□□□□□ -1.39
ATG4YNL223W MRX3P38172 270 aa6.34□□□□□ -1.39
ATG4YNL223W CCT4P39078 528 aaKnown RBP6.34□□□□□ -1.39
ATG4YNL223W DAK1P54838 584 aaKnown RBP6.34□□□□□ -1.39
ATG4YNL223W CEF1Q03654 590 aaPredicted RBP6.34□□□□□ -1.39
ATG4YNL223W ATG23Q06671 453 aa6.34□□□□□ -1.39
ATG4YNL223W SHS1Q07657 551 aa6.34□□□□□ -1.39
ATG4YNL223W OSH2Q12451 1283 aa6.34□□□□□ -1.39
ATG4YNL223W ZPS1Q12512 249 aa6.34□□□□□ -1.39
ATG4YNL223W RMP1Q12530 201 aa6.34□□□□□ -1.39
ATG4YNL223W AI5_BETAQ9ZZX0 354 aa6.34□□□□□ -1.39
ATG4YNL223W MOT1P32333 1867 aa6.34□□□□□ -1.39
ATG4YNL223W COX4P04037 155 aa6.34□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 116.7 ms