RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W BDH2P39713 417 aa2.66□□□□□ -1.98
PFD1YJL179W VHR1P40522 640 aa2.66□□□□□ -1.98
PFD1YJL179W YLR225CQ05948 407 aaKnown RBP2.66□□□□□ -1.98
PFD1YJL179W SSN2P38931 1420 aa2.66□□□□□ -1.98
PFD1YJL179W MPH2P0CD99 609 aa2.65□□□□□ -1.99
PFD1YJL179W PRP4P20053 465 aaKnown RBP2.65□□□□□ -1.99
PFD1YJL179W NGG1P32494 702 aa2.65□□□□□ -1.99
PFD1YJL179W RPD3P32561 433 aa2.65□□□□□ -1.99
PFD1YJL179W SLD2P34252 453 aa2.65□□□□□ -1.99
PFD1YJL179W MNR2P35724 969 aa2.65□□□□□ -1.99
PFD1YJL179W BCD1P38772 366 aa2.65□□□□□ -1.99
PFD1YJL179W KRI1P42846 591 aaKnown RBP2.65□□□□□ -1.99
PFD1YJL179W POL32P47110 350 aa2.65□□□□□ -1.99
PFD1YJL179W PKH1Q03407 766 aa2.65□□□□□ -1.99
PFD1YJL179W HIR3P47171 1648 aa2.64□□□□□ -1.99
PFD1YJL179W TYE7P33122 291 aaPredicted RBP2.64□□□□□ -1.99
PFD1YJL179W CCT4P39078 528 aaKnown RBP2.64□□□□□ -1.99
PFD1YJL179W ARG2P40360 574 aa2.64□□□□□ -1.99
PFD1YJL179W CTR1P49573 406 aa2.64□□□□□ -1.99
PFD1YJL179W UBC9P50623 157 aaPredicted RBP2.64□□□□□ -1.99
PFD1YJL179W ASI2P53895 289 aa2.64□□□□□ -1.99
PFD1YJL179W NEW1Q08972 1196 aaKnown RBP2.64□□□□□ -1.99
PFD1YJL179W NUP1P20676 1076 aa2.63□□□□□ -1.99
PFD1YJL179W NPP1P25353 742 aa2.63□□□□□ -1.99
PFD1YJL179W AGP1P25376 633 aa2.63□□□□□ -1.99
PFD1YJL179W SBA1P28707 216 aaKnown RBP2.63□□□□□ -1.99
PFD1YJL179W AFR1P33304 620 aa2.63□□□□□ -1.99
PFD1YJL179W UBC11P52492 156 aa2.63□□□□□ -1.99
PFD1YJL179W NRG1Q03125 231 aa2.63□□□□□ -1.99
PFD1YJL179W DUS3Q06053 668 aaKnown RBP2.63□□□□□ -1.99
PFD1YJL179W ESC2Q06340 456 aa2.63□□□□□ -1.99
PFD1YJL179W ECM5Q03214 1411 aa2.62□□□□□ -1.99
PFD1YJL179W SPC29P33419 253 aa2.62□□□□□ -1.99
PFD1YJL179W PET112P33893 541 aa2.62□□□□□ -1.99
PFD1YJL179W SIT1P39980 628 aa2.62□□□□□ -1.99
PFD1YJL179W VPS16Q03308 798 aa2.62□□□□□ -1.99
PFD1YJL179W ASM4Q05166 528 aa2.62□□□□□ -1.99
PFD1YJL179W XRN1P22147 1528 aaKnown RBP2.62□□□□□ -1.99
PFD1YJL179W CLN2P20438 545 aa2.61□□□□□ -1.99
PFD1YJL179W REV7P38927 245 aa2.61□□□□□ -1.99
PFD1YJL179W MBP1P39678 833 aa2.61□□□□□ -1.99
PFD1YJL179W HOS4P40480 1083 aa2.61□□□□□ -1.99
PFD1YJL179W HDA1P53973 706 aa2.61□□□□□ -1.99
PFD1YJL179W STP1Q00947 519 aa2.61□□□□□ -1.99
PFD1YJL179W YKR011CQ02209 353 aa2.61□□□□□ -1.99
PFD1YJL179W ATG11Q12527 1178 aa2.61□□□□□ -1.99
PFD1YJL179W APN1P22936 367 aa2.6□□□□□ -1.99
PFD1YJL179W HIR1P32479 840 aa2.6□□□□□ -1.99
PFD1YJL179W ABD1P32783 436 aaPredicted RBP2.6□□□□□ -1.99
PFD1YJL179W MUP3P38734 546 aa2.6□□□□□ -1.99
PFD1YJL179W IRC8P47046 822 aa2.6□□□□□ -1.99
PFD1YJL179W BUL2Q03758 920 aaKnown RBP2.6□□□□□ -1.99
PFD1YJL179W UBS1P38290 277 aa2.59□□□□□ -1.99
PFD1YJL179W BUD4P47136 1447 aa2.59□□□□□ -2
PFD1YJL179W SIR3P06701 978 aa2.58□□□□□ -2
PFD1YJL179W PYC1P11154 1178 aaKnown RBP2.58□□□□□ -2
PFD1YJL179W RFA1P22336 621 aaKnown RBP2.58□□□□□ -2
PFD1YJL179W URA1P28272 314 aaPredicted RBP2.58□□□□□ -2
PFD1YJL179W CEP3P40969 608 aa2.58□□□□□ -2
PFD1YJL179W SHE9Q04172 456 aa2.58□□□□□ -2
PFD1YJL179W THO2P53552 1597 aaKnown RBP2.57□□□□□ -2
PFD1YJL179W YLR415CO13578 112 aa2.57□□□□□ -2
PFD1YJL179W ADE8P04161 214 aa2.57□□□□□ -2
PFD1YJL179W PHR1P05066 565 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
PFD1YJL179W CCR4P31384 837 aaKnown RBP2.57□□□□□ -2
PFD1YJL179W PZF1P39933 429 aa2.57□□□□□ -2
PFD1YJL179W ULP2P40537 1034 aaPredicted RBP2.57□□□□□ -2
PFD1YJL179W CCM1P48237 864 aaPredicted RBP2.57□□□□□ -2
PFD1YJL179W TAF2P23255 1407 aa2.57□□□□□ -2
PFD1YJL179W REV3P14284 1504 aa2.57□□□□□ -2
PFD1YJL179W RPA135P22138 1203 aaKnown RBP2.56□□□□□ -2
PFD1YJL179W SIC1P38634 284 aa2.56□□□□□ -2
PFD1YJL179W BAP3P41815 604 aa2.56□□□□□ -2
PFD1YJL179W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
PFD1YJL179W FAA4P47912 694 aaKnown RBP2.56□□□□□ -2
PFD1YJL179W FMP30Q02883 468 aa2.56□□□□□ -2
PFD1YJL179W MUS81Q04149 632 aaPredicted RBP2.56□□□□□ -2
PFD1YJL179W YDR306CQ06640 478 aa2.56□□□□□ -2
PFD1YJL179W TGL5Q12043 749 aa2.56□□□□□ -2
PFD1YJL179W YKL033W-AQ86ZR7 236 aa2.56□□□□□ -2
PFD1YJL179W PEP1P32319 1579 aa2.55□□□□□ -2
PFD1YJL179W PPH3P32345 308 aa2.55□□□□□ -2
PFD1YJL179W VBA5P36172 582 aa2.55□□□□□ -2
PFD1YJL179W DED81P38707 554 aaKnown RBP2.55□□□□□ -2
PFD1YJL179W PSA1P41940 361 aaKnown RBP2.55□□□□□ -2
PFD1YJL179W ATG4P53867 494 aa2.55□□□□□ -2
PFD1YJL179W ATG2P53855 1592 aa2.54□□□□□ -2
PFD1YJL179W MDS3P53094 1487 aa2.54□□□□□ -2
PFD1YJL179W ASF1P32447 279 aa2.54□□□□□ -2
PFD1YJL179W SCT1P32784 759 aa2.54□□□□□ -2
PFD1YJL179W DUS1P53759 423 aaKnown RBP2.54□□□□□ -2
PFD1YJL179W MLH3Q12083 715 aa2.54□□□□□ -2
PFD1YJL179W SIN3P22579 1536 aa2.53□□□□□ -2
PFD1YJL179W SKI3P17883 1432 aaKnown RBP2.53□□□□□ -2
PFD1YJL179W RPS9AO13516 197 aaKnown RBP2.53□□□□□ -2
PFD1YJL179W MBR1P23493 339 aa2.53□□□□□ -2
PFD1YJL179W YRO2P38079 344 aa2.53□□□□□ -2
PFD1YJL179W TOK1P40310 691 aa2.53□□□□□ -2
PFD1YJL179W TPO2P53283 614 aa2.53□□□□□ -2
PFD1YJL179W LCD1Q04377 747 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms