RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeast

Gene SGN1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGN1	YIR001C	YNR040W	P53736	256 aa		4.23	□□□□□ -1.73
SGN1	YIR001C	MUK1	Q02866	612 aa		4.23	□□□□□ -1.73
SGN1	YIR001C	YMR187C	Q03236	431 aa		4.23	□□□□□ -1.73
SGN1	YIR001C	PIG1	Q06216	648 aa		4.23	□□□□□ -1.73
SGN1	YIR001C	TDA6	Q06466	467 aa		4.23	□□□□□ -1.73
SGN1	YIR001C	CRD1	Q07560	283 aa		4.23	□□□□□ -1.73
SGN1	YIR001C	BEM2	P39960	2167 aa	Known RBP	4.23	□□□□□ -1.73
SGN1	YIR001C	MBR1	P23493	339 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	CDC48	P25694	835 aa	Known RBP	4.22	□□□□□ -1.73
SGN1	YIR001C	CDC3	P32457	520 aa	Known RBP	4.22	□□□□□ -1.73
SGN1	YIR001C	ALG14	P38242	237 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	SKN7	P38889	622 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	NTA1	P40354	457 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	YIL165C	P40446	119 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	SAD1	P43589	448 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	ALT2	P52892	507 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	YGL081W	P53156	320 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	GIS4	Q04233	774 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	YDR341C	Q05506	607 aa	Known RBP	4.22	□□□□□ -1.73
SGN1	YIR001C	PHM6	Q05637	104 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	YOR111W	Q99210	232 aa		4.22	□□□□□ -1.73
SGN1	YIR001C	PGK1	P00560	416 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SGN1	YIR001C	RNR3	P21672	869 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	IMG2	P25642	146 aa	Predicted RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	ADK2	P26364	225 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	PEP3	P27801	918 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	UBP11	P36026	717 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	MRPL7	P36519	292 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	AAP1	P37898	856 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	STB5	P38699	743 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	CIC1	P38779	376 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	AIM46	P38885	310 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	CCT3	P39077	534 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	BOL3	P39724	118 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	CNM67	P53865	581 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	YNL134C	P53912	376 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	ORC4	P54791	529 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	SMD2	Q06217	110 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	WHI4	Q07655	649 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	HIF1	Q12373	385 aa		4.21	□□□□□ -1.74
SGN1	YIR001C	SEN1	Q00416	2231 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	ACC1	Q00955	2233 aa	Known RBP	4.21	□□□□□ -1.74
SGN1	YIR001C	BET2	P20133	325 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	NAR1	P23503	491 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	SEC21	P32074	935 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	PGM1	P33401	570 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	PGM2	P37012	569 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	RFS1	P38234	210 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	RAD55	P38953	406 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	CCC2	P38995	1004 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	ESL1	P40456	1118 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	LEM3	P42838	414 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	YFL052W	P43551	465 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	SUT1	P53032	299 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	BIO5	P53744	561 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	OYE2	Q03558	400 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	CSM3	Q04659	317 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	HCR1	Q05775	265 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	YLR257W	Q06146	321 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	IRC10	Q08118	586 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	HFI1	Q12060	488 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	MNL2	Q12205	849 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	PCD1	Q12524	340 aa		4.2	□□□□□ -1.74
SGN1	YIR001C	PGA3	Q12746	312 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	TOR2	P32600	2474 aa	Known RBP	4.2	□□□□□ -1.74
SGN1	YIR001C	MET6	P05694	767 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	SNF1	P06782	633 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	WHI2	P12611	486 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	SRO9	P25567	434 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	EFT1	P32324	842 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	PRS1	P32895	427 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	SAS3	P34218	831 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	IRS4	P36115	615 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	RXT2	P38255	430 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	YHL026C	P38740	315 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	EAF5	P39995	279 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	MOB1	P40484	314 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	PPT1	P53043	513 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	BNI5	P53890	448 aa	Known RBP	4.19	□□□□□ -1.74
SGN1	YIR001C	GDE1	Q02979	1223 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	SMC5	Q08204	1093 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	RAD50	P12753	1312 aa		4.19	□□□□□ -1.74
SGN1	YIR001C	DED1	P06634	604 aa	Known RBP	4.18	□□□□□ -1.74
SGN1	YIR001C	CLN3	P13365	580 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	RPB10	P22139	70 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	CSE2	P33308	149 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	PEX28	P38848	579 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	AKR1	P39010	764 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	RGD2	P43556	714 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	LAM5	P43560	674 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	GUP1	P53154	560 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	TPO2	P53283	614 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	AIM33	Q04516	312 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	EMG1	Q06287	252 aa	Known RBP	4.18	□□□□□ -1.74
SGN1	YIR001C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
SGN1	YIR001C	YDR215C	Q12240	137 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	RRD2	Q12461	358 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	TOR1	P35169	2470 aa		4.18	□□□□□ -1.74
SGN1	YIR001C	ILV1	P00927	576 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms