RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W VPS70P47161 811 aa8.44□□□□□ -1.06
SHC1YER096W CLA4P48562 842 aa8.44□□□□□ -1.06
SHC1YER096W ESBP6P53918 673 aa8.44□□□□□ -1.06
SHC1YER096W UTP5Q04177 643 aaKnown RBP8.44□□□□□ -1.06
SHC1YER096W YML082WQ04533 649 aaKnown RBP8.44□□□□□ -1.06
SHC1YER096W HIF1Q12373 385 aa8.44□□□□□ -1.06
SHC1YER096W HXT1P32465 570 aa8.43□□□□□ -1.06
SHC1YER096W BCH2P36122 765 aa8.43□□□□□ -1.06
SHC1YER096W PTC4P38089 393 aa8.43□□□□□ -1.06
SHC1YER096W YMR124WP39523 943 aaKnown RBP8.43□□□□□ -1.06
SHC1YER096W INP51P40559 946 aaKnown RBP8.43□□□□□ -1.06
SHC1YER096W CPR7P47103 393 aa8.43□□□□□ -1.06
SHC1YER096W COS5P47187 383 aa8.43□□□□□ -1.06
SHC1YER096W CUS1Q02554 436 aaPredicted RBP8.43□□□□□ -1.06
SHC1YER096W RGA2Q06407 1009 aa8.43□□□□□ -1.06
SHC1YER096W MDM20Q12387 796 aaKnown RBP8.43□□□□□ -1.06
SHC1YER096W ADE4P04046 510 aaKnown RBP8.42□□□□□ -1.06
SHC1YER096W SPT2P06843 333 aaPredicted RBP8.42□□□□□ -1.06
SHC1YER096W ERG11P10614 530 aa8.42□□□□□ -1.06
SHC1YER096W WHI2P12611 486 aa8.42□□□□□ -1.06
SHC1YER096W SCJ1P25303 377 aa8.42□□□□□ -1.06
SHC1YER096W DAL2P25335 343 aa8.42□□□□□ -1.06
SHC1YER096W MSS51P32335 436 aa8.42□□□□□ -1.06
SHC1YER096W MRX3P38172 270 aa8.42□□□□□ -1.06
SHC1YER096W TCD1P38756 429 aa8.42□□□□□ -1.06
SHC1YER096W TVP23P38962 199 aa8.42□□□□□ -1.06
SHC1YER096W ULI1P43604 169 aa8.42□□□□□ -1.06
SHC1YER096W TBF1Q02457 562 aa8.42□□□□□ -1.06
SHC1YER096W DIG1Q03063 452 aaKnown RBP8.42□□□□□ -1.06
SHC1YER096W CEF1Q03654 590 aaPredicted RBP8.42□□□□□ -1.06
SHC1YER096W SML1Q04964 104 aa8.42□□□□□ -1.06
SHC1YER096W MAM3Q12296 706 aa8.42□□□□□ -1.06
SHC1YER096W RTP1Q12751 981 aa8.42□□□□□ -1.06
SHC1YER096W SNA3P14359 133 aa8.41□□□□□ -1.06
SHC1YER096W CBF2P32504 956 aa8.41□□□□□ -1.06
SHC1YER096W SMC2P38989 1170 aaKnown RBP8.41□□□□□ -1.06
SHC1YER096W CAJ1P39101 391 aa8.41□□□□□ -1.06
SHC1YER096W RRD1P40454 393 aaKnown RBP8.41□□□□□ -1.06
SHC1YER096W SCD6P45978 349 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
SHC1YER096W JJJ3P47138 172 aa8.41□□□□□ -1.06
SHC1YER096W NGL3Q03210 505 aa8.41□□□□□ -1.06
SHC1YER096W YML020WQ03722 664 aa8.41□□□□□ -1.06
SHC1YER096W YDR278CQ05612 105 aa8.41□□□□□ -1.06
SHC1YER096W VAC14Q06708 880 aa8.41□□□□□ -1.06
SHC1YER096W IWR1Q07532 353 aaPredicted RBP8.41□□□□□ -1.06
SHC1YER096W HFI1Q12060 488 aa8.41□□□□□ -1.06
SHC1YER096W GLN3P18494 730 aa8.4□□□□□ -1.06
SHC1YER096W PAP1P29468 568 aaKnown RBP8.4□□□□□ -1.06
SHC1YER096W SWI3P32591 825 aa8.4□□□□□ -1.06
SHC1YER096W DUR3P33413 735 aa8.4□□□□□ -1.06
SHC1YER096W MAP2P38174 421 aaKnown RBP8.4□□□□□ -1.06
SHC1YER096W MMS4P38257 691 aa8.4□□□□□ -1.06
SHC1YER096W EXO5P38289 585 aa8.4□□□□□ -1.06
SHC1YER096W SHE10P53075 577 aa8.4□□□□□ -1.06
SHC1YER096W VPS62P53285 467 aa8.4□□□□□ -1.06
SHC1YER096W HOS3Q02959 697 aaKnown RBP8.4□□□□□ -1.06
SHC1YER096W ASP3-2P0CX77 362 aa8.39□□□□□ -1.07
SHC1YER096W ASP3-3P0CX78 362 aa8.39□□□□□ -1.07
SHC1YER096W ASP3-4P0CX79 362 aa8.39□□□□□ -1.07
SHC1YER096W ASP3-1P0CZ17 362 aa8.39□□□□□ -1.07
SHC1YER096W ADE2P21264 571 aaKnown RBP8.39□□□□□ -1.07
SHC1YER096W RNR1P21524 888 aaKnown RBP8.39□□□□□ -1.07
SHC1YER096W RRT12P25381 491 aa8.39□□□□□ -1.07
SHC1YER096W YKL050CP35736 922 aa8.39□□□□□ -1.07
SHC1YER096W AIM21P40563 679 aa8.39□□□□□ -1.07
SHC1YER096W DAS1P47005 663 aa8.39□□□□□ -1.07
SHC1YER096W AZR1P50080 613 aa8.39□□□□□ -1.07
SHC1YER096W MUK1Q02866 612 aa8.39□□□□□ -1.07
SHC1YER096W OPY2Q06810 360 aa8.39□□□□□ -1.07
SHC1YER096W DAS2Q12084 232 aa8.39□□□□□ -1.07
SHC1YER096W GIS3Q12418 502 aa8.39□□□□□ -1.07
SHC1YER096W AFT1P22149 690 aa8.39□□□□□ -1.07
SHC1YER096W PAH1P32567 862 aa8.39□□□□□ -1.07
SHC1YER096W SMF1P38925 575 aa8.39□□□□□ -1.07
SHC1YER096W FTR1P40088 404 aa8.39□□□□□ -1.07
SHC1YER096W HXT8P40886 569 aa8.39□□□□□ -1.07
SHC1YER096W RPA49Q01080 415 aaPredicted RBP8.39□□□□□ -1.07
SHC1YER096W SNU56Q03782 492 aaKnown RBP8.39□□□□□ -1.07
SHC1YER096W DOT1Q04089 582 aaKnown RBP8.39□□□□□ -1.07
SHC1YER096W ECM3Q99252 613 aa8.39□□□□□ -1.07
SHC1YER096W AI5_BETAQ9ZZX0 354 aa8.39□□□□□ -1.07
SHC1YER096W CDC33P07260 213 aaKnown RBP8.38□□□□□ -1.07
SHC1YER096W STE11P23561 717 aa8.38□□□□□ -1.07
SHC1YER096W PRR1P28708 518 aa8.38□□□□□ -1.07
SHC1YER096W RPT1P33299 467 aaKnown RBP8.38□□□□□ -1.07
SHC1YER096W CSG2P35206 410 aa8.38□□□□□ -1.07
SHC1YER096W UIP5P36137 443 aa8.38□□□□□ -1.07
SHC1YER096W SMC3P47037 1230 aa8.38□□□□□ -1.07
SHC1YER096W ABP140Q08641 628 aaKnown RBP8.38□□□□□ -1.07
SHC1YER096W GFA1P14742 717 aaKnown RBP8.37□□□□□ -1.07
SHC1YER096W CKI1P20485 582 aa8.37□□□□□ -1.07
SHC1YER096W SKG6P32900 734 aaPredicted RBP8.37□□□□□ -1.07
SHC1YER096W UBX7P38349 436 aa8.37□□□□□ -1.07
SHC1YER096W YER186CP40101 306 aa8.37□□□□□ -1.07
SHC1YER096W CEP3P40969 608 aa8.37□□□□□ -1.07
SHC1YER096W YGR021WP53212 290 aa8.37□□□□□ -1.07
SHC1YER096W BTN2P53286 410 aa8.37□□□□□ -1.07
SHC1YER096W YDR222WQ04925 415 aa8.37□□□□□ -1.07
SHC1YER096W CDD1Q06549 142 aa8.37□□□□□ -1.07
SHC1YER096W PET111P08468 800 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms