RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIZ1	YDR409W	HDA2	Q06629	674 aa		3.59	□□□□□ -1.83
SIZ1	YDR409W	INP54	Q08227	384 aa	Known RBP	3.59	□□□□□ -1.83
SIZ1	YDR409W	TIF6	Q12522	245 aa	Known RBP	3.59	□□□□□ -1.83
SIZ1	YDR409W	HBN1	Q96VH4	193 aa		3.59	□□□□□ -1.83
SIZ1	YDR409W	SAC3	P46674	1301 aa		3.59	□□□□□ -1.83
SIZ1	YDR409W	VAN1	P23642	535 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	BRF1	P29056	596 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	HEM12	P32347	362 aa	Predicted RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	SGM1	P47166	707 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	SRB7	P47822	140 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	HSV2	P50079	448 aa	Predicted RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	PBP1	P53297	722 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	STE20	Q03497	939 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	YDR131C	Q03899	556 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	SXM1	Q04175	944 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	SPN1	Q06505	410 aa	Predicted RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	NOP6	Q07623	225 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	RMP1	Q12530	201 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	ARD1	P07347	238 aa	Predicted RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	RAM1	P22007	431 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	SAN1	P22470	610 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	SSH4	P32343	579 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	BEM3	P32873	1128 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	YSW1	P38280	609 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	OSH3	P38713	996 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	SPT8	P38915	602 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	PAC1	P39946	494 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	ACA1	P39970	489 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	IRR1	P40541	1150 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	NAS2	P40555	220 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	MIC19	P43594	170 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	ROG3	P43602	733 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	RSF2	P46974	1380 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	SAM37	P50110	327 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	TIM10	P87108	93 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	SNP1	Q00916	300 aa	Predicted RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	SRP1	Q02821	542 aa	Known RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	YDR338C	Q05497	695 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	BSC2	Q05611	235 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	CLF1	Q12309	687 aa	Predicted RBP	3.58	□□□□□ -1.84
SIZ1	YDR409W	OSH2	Q12451	1283 aa		3.58	□□□□□ -1.84
SIZ1	YDR409W	MST1	P07236	462 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	PRP16	P15938	1071 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	PEP3	P27801	918 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	BAP2	P38084	609 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	MCX1	P38323	520 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	EFM4	P40516	257 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	YJL055W	P47044	245 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	MDE1	P47095	244 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	PMT3	P47190	753 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RPA14	P50106	137 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	TAN1	P53072	289 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	ARC35	P53731	342 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	SYH1	Q02875	849 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	ADI1	Q03677	179 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	ISR1	Q06098	443 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	NEW1	Q08972	1196 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	NSI1	Q12457	570 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	FAS2	P19097	1887 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	BAS1	P22035	811 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	SEC14	P24280	304 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	RRP43	P25359	394 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	PTP2	P29461	750 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	ADE17	P38009	592 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	PTC4	P38089	393 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	HXT6	P39003	570 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	HXT7	P39004	570 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	SAP1	P39955	897 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	IMA5	P40884	581 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	HXT10	P43581	546 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	IRC6	P43615	237 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	CUE3	P53137	624 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	VPS30	Q02948	557 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	NSE5	Q03718	556 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	VAC14	Q06708	880 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RTT10	Q08924	1013 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	HMI1	Q12039	706 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	NUR1	Q12066	484 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	GYP5	Q12344	894 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	SSK22	P25390	1331 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	MOD5	P07884	428 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RPS6A	P0CX37	236 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	RPS6B	P0CX38	236 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	PMR1	P13586	950 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RAD51	P25454	400 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RAD16	P31244	790 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	EFM2	P38347	419 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	SIP5	P40210	489 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	NCS2	P53923	493 aa	Predicted RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	SPO71	Q03868	1245 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RSC58	Q07979	502 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	MCD1	Q12158	566 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	RUD3	Q12234	484 aa	Known RBP	3.57	□□□□□ -1.84
SIZ1	YDR409W	HSP42	Q12329	375 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	DPH6	Q12429	685 aa		3.57	□□□□□ -1.84
SIZ1	YDR409W	LAM4	P38800	1345 aa		3.56	□□□□□ -1.84
SIZ1	YDR409W	CDC9	P04819	755 aa		3.56	□□□□□ -1.84
SIZ1	YDR409W	SPT2	P06843	333 aa	Predicted RBP	3.56	□□□□□ -1.84
SIZ1	YDR409W	HSP60	P19882	572 aa	Known RBP	3.56	□□□□□ -1.84
SIZ1	YDR409W	RAD53	P22216	821 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms